; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G012940 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G012940
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSpermidine synthase 1-like
Genome locationCicolChr01:24911439..24918707
RNA-Seq ExpressionCcUC01G012940
SyntenyCcUC01G012940
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001045 - Spermidine/spermine synthases
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030374 - Polyamine biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055218.1 spermidine synthase 1-like [Cucumis melo var. makuwa]1.5e-6851.12Show/hide
Query:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------
        M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P                              
Subjt:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------

Query:  -------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINS
                 + +DEFAYQEMLTHLPLCSI NPKK                                   VY K+FPD+A+ YKDPRVN YIGDGVAFI S
Subjt:  -------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINS

Query:  VPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIHTAAFCL
        VPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADSIWL+NFAMEDTITLC D                      +   IHTAAF L
Subjt:  VPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIHTAAFCL

Query:  PAFAKLAMGSKYA
        PAFAK AMGSKYA
Subjt:  PAFAKLAMGSKYA

KAG7019827.1 hypothetical protein SDJN02_18791, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5663.93Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        + +DE +YQEMLTHLPLCSIPNPKK                                   VY ++FPD+A+ Y DPRVNV+IGDGVAFI SVPP TYDAI
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMGSKYA
        IIDAF+GMGAYATELS+E  LKSIAKALKPGGV+S  ADS+W+ NF MEDTIT CR+IFKGSIHTAAFCLPAFAK  MGS YA
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMGSKYA

TYJ99147.1 spermidine synthase 1-like [Cucumis melo var. makuwa]1.5e-6850.16Show/hide
Query:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------
        M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P                              
Subjt:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------

Query:  -------------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDG
                       + +DEFAYQEMLTHLPLCSIPNPKK                                   VY K+FPD+A+ YKDPRVN YIGDG
Subjt:  -------------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDG

Query:  VAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIH
        VAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADSIWL+NFAMEDTITLC D                      +   IH
Subjt:  VAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIH

Query:  TAAFCLPAFAKLAMGSKYA
        +AAF LPAFAK AMGSKYA
Subjt:  TAAFCLPAFAKLAMGSKYA

XP_008446082.2 PREDICTED: spermidine synthase 1-like [Cucumis melo]5.0e-6446.45Show/hide
Query:  LFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP-------------------------------------------SA
        L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P                                             
Subjt:  LFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP-------------------------------------------SA

Query:  SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        + +DEFAYQEMLTHLPLCSIPNPKK                                   VY K+FPD+A+ YKDPRVN YIGDGVAFI SVPPATYDAI
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS--------------------------------------
        IIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADSIWL+NFAMEDTITLCR+IFKGS                                      
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS--------------------------------------

Query:  -----------------IHTAAFCLPAFAKLAMGSKYA
                         IH+AAF LPAFAK AMGSKYA
Subjt:  -----------------IHTAAFCLPAFAKLAMGSKYA

XP_038893662.1 spermidine synthase 2-like [Benincasa hispida]1.2e-7048.17Show/hide
Query:  MTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNG----ISFSPVFPVTNTWEGCDIGWVP---------------------------
        MTFQNG SS+T+AQL VP   TDHN+ +K++SFSP QN   N TQNG     SFSPVFP      GC +   P                           
Subjt:  MTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNG----ISFSPVFPVTNTWEGCDIGWVP---------------------------

Query:  ----------------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYI
                          + +DEFAYQEMLTHLPLCSIPNPKK                                   VY +YFPD+A+ YKDPRVNV I
Subjt:  ----------------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYI

Query:  GDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS--------------------
        GDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE LLKS+A ALKPGGVMSTPADSIW +NFAMEDTITLCRDIFKGS                    
Subjt:  GDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS--------------------

Query:  -----------------------------------IHTAAFCLPAFAKLAMGSKY
                                           IHTAAFCLPAFAK AMGSKY
Subjt:  -----------------------------------IHTAAFCLPAFAKLAMGSKY

TrEMBL top hitse value%identityAlignment
A0A0A0LQV4 PABS domain-containing protein1.6e-5550Show/hide
Query:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------SASREDEFAYQE
        MTFQNG SS+  +A L  P  +T+HN+PI+++SFSP     QN TQNG SFSP FP      GC +   P                   +  +D F +Q 
Subjt:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------SASREDEFAYQE

Query:  ML----------------------THLPLCSIPNP----------KKVYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYAT
                                 HL + ++               VY K+FP++A+ YKDPRVN YIGDGVAFI SVPPATYDAIIIDAFQGMG YA 
Subjt:  ML----------------------THLPLCSIPNP----------KKVYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYAT

Query:  ELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAK
        ELSNE LLKSIAKALKPGGV+STPADSIWL+NFAMEDTITLCR+IFKGS++ A   +P++A+
Subjt:  ELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAK

A0A1S3BF22 spermidine synthase 1-like2.4e-6446.45Show/hide
Query:  LFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP-------------------------------------------SA
        L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P                                             
Subjt:  LFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP-------------------------------------------SA

Query:  SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        + +DEFAYQEMLTHLPLCSIPNPKK                                   VY K+FPD+A+ YKDPRVN YIGDGVAFI SVPPATYDAI
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS--------------------------------------
        IIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADSIWL+NFAMEDTITLCR+IFKGS                                      
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS--------------------------------------

Query:  -----------------IHTAAFCLPAFAKLAMGSKYA
                         IH+AAF LPAFAK AMGSKYA
Subjt:  -----------------IHTAAFCLPAFAKLAMGSKYA

A0A5A7UJN5 Spermidine synthase 1-like7.2e-6951.12Show/hide
Query:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------
        M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P                              
Subjt:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------

Query:  -------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINS
                 + +DEFAYQEMLTHLPLCSI NPKK                                   VY K+FPD+A+ YKDPRVN YIGDGVAFI S
Subjt:  -------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINS

Query:  VPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIHTAAFCL
        VPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADSIWL+NFAMEDTITLC D                      +   IHTAAF L
Subjt:  VPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIHTAAFCL

Query:  PAFAKLAMGSKYA
        PAFAK AMGSKYA
Subjt:  PAFAKLAMGSKYA

A0A5D3BJ52 Spermidine synthase 1-like7.2e-6950.16Show/hide
Query:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------
        M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P                              
Subjt:  MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP------------------------------

Query:  -------------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDG
                       + +DEFAYQEMLTHLPLCSIPNPKK                                   VY K+FPD+A+ YKDPRVN YIGDG
Subjt:  -------------SASREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDG

Query:  VAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIH
        VAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADSIWL+NFAMEDTITLC D                      +   IH
Subjt:  VAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRD---------------------IFKGSIH

Query:  TAAFCLPAFAKLAMGSKYA
        +AAF LPAFAK AMGSKYA
Subjt:  TAAFCLPAFAKLAMGSKYA

A0A6J1C7X6 spermidine synthase 1-like2.3e-5442.77Show/hide
Query:  MTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFP-----VTNTW------------------EGCDIGWVPSA------
        M FQ G SS+        +    H  P+ +VS +  QN   N  QN  S SPVFP     +  +W                  +  D+    +A      
Subjt:  MTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFP-----VTNTW------------------EGCDIGWVPSA------

Query:  --------SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSV
                + +DEFAYQEMLTHLPLCSIPNPKK                                   VY K+FPD+A+ Y+DPRVNV IGDG AFI S+
Subjt:  --------SREDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSV

Query:  PPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS------------------------------
        PP TYDAII+DAFQGMGAYATELS++  L+SIAKALKPGGVMSTPADS+WL NFAMEDTI LCR IFKGS                              
Subjt:  PPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGS------------------------------

Query:  -------------------------IHTAAFCLPAFAKLAMGSKYA
                                 IHTAAFCLPAFAKLAMGSKYA
Subjt:  -------------------------IHTAAFCLPAFAKLAMGSKYA

SwissProt top hitse value%identityAlignment
O48658 Spermidine synthase 12.3e-3544.13Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+THLPLCSIPNPKKV                                     ++FPDVA+ Y+DPRVN++IGDGVAF+ +VP  TYDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A EL  +   +SIA+AL+PGGV+ST A+SIWLH   +E+ +  CR IFKGS++ A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

O48659 Spermidine synthase 22.1e-3341.9Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+THLPLCSIPNPKKV                                     ++FP+VA+ Y+DPRV +++GDGVAF+ +VP  TYDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A EL  +   +S+A+AL PGGV+ T A+SIWLH   +ED ++ CR IFKGS++ A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

O48660 Spermidine synthase7.3e-3443.02Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+ HLPLCSIPNPKKV                                     ++FPDVA+ Y+DPRVN++IGDGVAF+ +V   TYDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A EL  +   +SIA+AL+PGGV+ST A+SIWLH   +E+ +  CR IFKGS++ A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

Q96557 Spermidine synthase 21.7e-3541.41Show/hide
Query:  VFPVTNTWEGCDIGWVPSASREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVY
        VF  T   +   +  V   +  DE AYQEM+THLPLCSIPNPKKV                                     ++FPDVA+ Y+DPRVN++
Subjt:  VFPVTNTWEGCDIGWVPSASREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVY

Query:  IGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        IGDGVAF+ +VP  TYDA+I+D+   +G  A EL  +   ++IA+AL+PGGV+ST A+SIWLH   +E+ +  CR+IFKGS++ A   +P +    +G
Subjt:  IGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

Q9ZS45 Spermidine synthase1.0e-3544.69Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+THLPLCSIPNPKKV                                     ++FPDVA+ Y+DPRVN++IGDGVAF+ +VP  TYDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A EL  +   +SIAKAL+PGGV+ST A+SIWLH   +E+ +  CR IFKGS++ A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 14.4e-3441.34Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+THLPLCSIPNPKKV                                     ++FPDVA+ Y+DPRVN+ IGDGVAF+ +    +YDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A EL  +   +S+A+AL+PGGV+ T A+S+WLH   +ED ++ CR+IFKGS++ A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

AT1G23820.2 spermidine synthase 15.7e-3441.71Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+THLPLCSIPNPKKV                                     ++FPDVA+ Y+DPRVN+ IGDGVAF+ +    +YDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAK
        I+D+   +G  A EL  +   +S+A+AL+PGGV+ T A+S+WLH   +ED ++ CR+IFKGS++ A   +P + +
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAK

AT1G70310.1 spermidine synthase 22.8e-3341.34Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        +  DE AYQEM+THLPLCSI NPKKV                                     +YFP+VA+ Y+DPRVN+ IGDGVAF+ +    TYDA+
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A EL  +   +S+ +AL+PGGV+ T A+S+WLH   +ED ++ CRDIFKGS++ A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

AT5G53120.1 spermidine synthase 32.6e-2635.75Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        + +DE AYQEM+ HLPLCSI +PK V                                     K+FP++A+ + DPRV ++IGD   F+   P   YDAI
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A  L  +   +++A+ALKPGGV+   A+S+WLH   +ED I++CR  FK S+H A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG

AT5G53120.2 spermidine synthase 32.6e-2635.75Show/hide
Query:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI
        + +DE AYQEM+ HLPLCSI +PK V                                     K+FP++A+ + DPRV ++IGD   F+   P   YDAI
Subjt:  SREDEFAYQEMLTHLPLCSIPNPKKVY-----------------------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAI

Query:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG
        I+D+   +G  A  L  +   +++A+ALKPGGV+   A+S+WLH   +ED I++CR  FK S+H A   +P +    +G
Subjt:  IIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAATTCTTCAAAAATGACATTTCAAAATGGTGCCTCTTCTGCTACAAGAGCTCAACTCTTTGTCCCTATCACTCAGACCGACCATAATAAACCTATAAAAATGGT
TTCTTTTTCTCCCGCTCAAAACAACGCTCAAAACAACACTCAAAATGGGATCTCTTTTTCTCCTGTTTTTCCAGTCACCAACACATGGGAAGGTTGTGATATTGGATGGG
TCCCTTCAGCTAGCAGAGAAGATGAGTTTGCTTATCAAGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTTACGATAAGTATTTCCCAGAC
GTTGCTATGGAGTACAAGGATCCTCGTGTGAATGTATACATAGGCGACGGTGTGGCCTTCATCAACTCTGTTCCTCCAGCCACCTATGATGCCATTATAATTGATGCATT
TCAGGGCATGGGGGCTTATGCAACAGAGCTTTCAAATGAAGCCTTACTTAAATCAATAGCAAAGGCTTTGAAGCCCGGCGGGGTAATGTCAACTCCGGCGGACAGCATAT
GGCTCCACAATTTCGCCATGGAAGATACCATAACTCTCTGTCGTGACATATTCAAAGGCTCTATCCATACTGCTGCGTTTTGTCTTCCTGCATTCGCAAAGTTGGCAATG
GGTTCCAAATATGCACGAGAAAGTCAGAATCATATGTATGCGAACAAGACTAAAGTCTAG
mRNA sequenceShow/hide mRNA sequence
CATTTGATGTATCATCAAATGAAAATTCGTTCACATTCATTTTTAAATTCACGTTGATATGCTAAATTCTTCAAAAATGACATTTCAAAATGGTGCCTCTTCTGCTACAA
GAGCTCAACTCTTTGTCCCTATCACTCAGACCGACCATAATAAACCTATAAAAATGGTTTCTTTTTCTCCCGCTCAAAACAACGCTCAAAACAACACTCAAAATGGGATC
TCTTTTTCTCCTGTTTTTCCAGTCACCAACACATGGGAAGGTTGTGATATTGGATGGGTCCCTTCAGCTAGCAGAGAAGATGAGTTTGCTTATCAAGAAATGCTCACTCA
TCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTTACGATAAGTATTTCCCAGACGTTGCTATGGAGTACAAGGATCCTCGTGTGAATGTATACATAGGCGACGGTG
TGGCCTTCATCAACTCTGTTCCTCCAGCCACCTATGATGCCATTATAATTGATGCATTTCAGGGCATGGGGGCTTATGCAACAGAGCTTTCAAATGAAGCCTTACTTAAA
TCAATAGCAAAGGCTTTGAAGCCCGGCGGGGTAATGTCAACTCCGGCGGACAGCATATGGCTCCACAATTTCGCCATGGAAGATACCATAACTCTCTGTCGTGACATATT
CAAAGGCTCTATCCATACTGCTGCGTTTTGTCTTCCTGCATTCGCAAAGTTGGCAATGGGTTCCAAATATGCACGAGAAAGTCAGAATCATATGTATGCGAACAAGACTA
AAGTCTAGCAAATCCAGTGGTTTCTCAACTGTAGGCTGTAATGTCAAAGTGGGAAAAGGGAACTGTTGTCAATCGAGACTTTTCTAATATAAATGAATATCTCATCTATC
ACAATGGGAGATGTTTGATTTCGAGATCTTTTGGTTGCATGGACTTTATACAAAGATAATGAGGTAGAGAAAAATAGACAACCAGAAACACTAAAACTCCAAGGTCGGCT
TCTTCACCGACAGCTGGTCGACGAGGGCTAGCCCAGTATATCTGGCTTGCACACCACATGGAATATAGGGTAGCTACAACTACGATAAGCTTTACCGACTGATACGATTG
TTCTGACATCGACTTTGCAGACTTCACTCTGTCTCATAAAAGAAGCATGAATGGTATAAGGGCATGCTAAAGATTAAGAAAAAAAAACTCAAATGGCACACGGAGTATAA
TTGGTATTTAAGAACCTATTAATGTATACAAAGCCGCCGATTAAGCAAGTGCACAAGAATCCAACAACGAGAACAGCATCTGGATTAATTGGCGCTCGGTTCTCCCACCA
ACCAGTGCTCAATATCCAAGTATACATTGACGAATGCCCATTTTCCTCAAACAAATGGTCAAGAAAGAAGTGTGAGAAAGAACCAGCAGAGATTAACAACAAGCATTGCC
TTCTATTAAGAGATACCCCAAAGACGGAATCGAGGAGGCCCTTGTGGAGTAGAAAAGAGGAGAGCCAGGAGTAGAAGAGGCAGAGAGGAAGACCCAGAATGAGGATGTAG
AAGAGGGGATGATGGATTGCGTCGGGAAGGGAAGATGCTGAGAAACCGAGAACGGAGGAGAGCCAATCGGAGAAGGAGCCGATGTCGGGGCCGAAGAAGGCGTTGAGGGT
GTAAACGAGGGTATGGTGGGGGCTGAATCGACCGTCGGTGAGAGTGGTCAGAGCCATGCCTGAGCCCATGGCGTAGAGCATGTGAGGCCCAGGTCCAGGCATGGTTCCGT
CTCAACGATCGAAGTCGCAATCGCAACCCAAGTTTCCGATCTCAATACACAGTAGTGTCGAAGGGAACGGAAGCTATTAACTTGATG
Protein sequenceShow/hide protein sequence
MLNSSKMTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVPSASREDEFAYQEMLTHLPLCSIPNPKKVYDKYFPD
VAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAM
GSKYARESQNHMYANKTKV