; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G013530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G013530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionubiquitin-like protein 5
Genome locationCicolChr01:25664514..25664896
RNA-Seq ExpressionCcUC01G013530
SyntenyCcUC01G013530
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0006464 - cellular protein modification process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily
IPR039732 - Ubiquitin-like modifier Hub1/Ubl5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7058928.1 unnamed protein product [Microthlaspi erraticum]4.7e-34100Show/hide
Query:  KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

KAG6520004.1 hypothetical protein ZIOFF_017033 [Zingiber officinale]2.1e-3497.37Show/hide
Query:  RAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        +AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  RAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

KCW51380.1 hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis]3.6e-3498.67Show/hide
Query:  AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

RWW43537.1 hypothetical protein BHE74_00050784 [Ensete ventricosum]6.1e-3494.74Show/hide
Query:  RAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        +AKMIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRA+KIRIQKWYN+YKDHITLKDYEIHDGMGLELYYN
Subjt:  RAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_026416497.1 ubiquitin-like protein 5 [Papaver somniferum]4.7e-3490.24Show/hide
Query:  LFNTVSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        LF   S+AK IEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYN+YKDHITL DYEIHDGMGLELYYN
Subjt:  LFNTVSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

TrEMBL top hitse value%identityAlignment
A0A059ADC7 Ubiquitin-like domain-containing protein (Fragment)1.7e-3498.67Show/hide
Query:  AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A3L6PNH3 Ubiquitin-like protein 53.0e-3498.67Show/hide
Query:  AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  AKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A6D2L053 Ubiquitin-like domain-containing protein2.3e-34100Show/hide
Query:  KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

J3N5Z0 Ubiquitin-like domain-containing protein3.0e-3494.87Show/hide
Query:  VSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        V   KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  VSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

M5W6S3 Ubiquitin-like domain-containing protein1.3e-3488.37Show/hide
Query:  FSRSLFNTVSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        F  SL     + KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  FSRSLFNTVSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

SwissProt top hitse value%identityAlignment
Q3T0Z3 Ubiquitin-like protein 55.2e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q6EGX7 Ubiquitin-like protein 55.2e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9BZL1 Ubiquitin-like protein 55.2e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9EPV8 Ubiquitin-like protein 55.2e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9FGZ9 Ubiquitin-like protein 55.2e-3698.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Arabidopsis top hitse value%identityAlignment
AT3G45180.1 Ubiquitin-like superfamily protein9.1e-3695.89Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

AT5G42300.1 ubiquitin-like protein 53.7e-3798.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGATCTTTGGCCAAACGCGTTTTCAAGAAGCTTGTTCAACACGGTTTCAAGGGCGAAGATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTCCGGGT
GAAGTGTAACGAGGACGATACGATCGGCGACTTGAAGAAGCTCGTCGCCGCTCAGACCGGTACCAGGGCCGAGAAAATCAGGATCCAAAAGTGGTACAACATCTACAAGG
ATCATATCACTCTCAAGGATTACGAGATTCACGACGGCATGGGTCTCGAGCTCTATTACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGATCTTTGGCCAAACGCGTTTTCAAGAAGCTTGTTCAACACGGTTTCAAGGGCGAAGATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTCCGGGT
GAAGTGTAACGAGGACGATACGATCGGCGACTTGAAGAAGCTCGTCGCCGCTCAGACCGGTACCAGGGCCGAGAAAATCAGGATCCAAAAGTGGTACAACATCTACAAGG
ATCATATCACTCTCAAGGATTACGAGATTCACGACGGCATGGGTCTCGAGCTCTATTACAACTGA
Protein sequenceShow/hide protein sequence
MYDLWPNAFSRSLFNTVSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN