; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G013810 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G013810
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNDR1/HIN1-like protein 12
Genome locationCicolChr01:26437098..26438513
RNA-Seq ExpressionCcUC01G013810
SyntenyCcUC01G013810
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462337.1 PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]7.5e-7474Show/hide
Query:  MRS-TTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIH
        MRS TTT+GEASS + S + QN T K+TR+IRIIGR LLSVIFLV LA++ICWLVVFPK PR VVETGKV  H STHN+LNATIAFT K YNPNKRASIH
Subjt:  MRS-TTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIH

Query:  MASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        + SMRMI+TSMGQ FSSA+P F  TPGNQT LS +  VNF+YPFG+REEI+PELHFSAE+SYSV  WTS+PRLL+IYCN LLL+IN + TF+NTKC VDL
Subjt:  MASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

XP_008462348.1 PREDICTED: protein YLS9-like [Cucumis melo]1.0e-7079.33Show/hide
Query:  NGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRFSSAIPT
        +G  KRTRLIR++GRSLL VIFLVAL +IICWLVV PKTPRL+VETGKV  H+ST ++LNATIAFT K+YNPNKRASIHM  MRMIV +MG RFSSAIP+
Subjt:  NGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRFSSAIPT

Query:  FTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        FTLTP NQT L S+  VNFEYPFGY EEI+PEL FSAEVSYSVE+W SKPRLLEIYCN LLLKIN STTFDNTKCKVDL
Subjt:  FTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

XP_011648454.1 uncharacterized protein LOC105434469 [Cucumis sativus]2.2e-7373.1Show/hide
Query:  STTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMAS
        STT +GEASS + S + QN T K+TR+IRIIGRSLLSVIFLV LA++ICWLVVFPK PR+ VETG+V  H STHN+LNATI FT K YNPNKRAS+H+ S
Subjt:  STTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMAS

Query:  MRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        MRMIVTSMGQ FSS IPTF  TPGNQT LS +  VNF+YPFG++EEI+PELHFSAE+SYSVE WTS+PRLL IYCN LLL+IN + TF+NTKC VDL
Subjt:  MRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

XP_011654134.1 NDR1/HIN1-like protein 10 isoform X2 [Cucumis sativus]4.3e-6972.22Show/hide
Query:  MRSTTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHM
        MRSTTT              +G  KRTRLIR++GRSLL VIFLVAL +IICWLVV PK+PRL+VETGKV  H+ST ++LNATIAFT K+YNPNKRASIHM
Subjt:  MRSTTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHM

Query:  ASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVD
          MRMIV +MG RFSSAIP+FTLTP NQT LSS+  VNFEYPFGY EEI+PEL FSAEVSYS+++W SKPRLLEIYCN +LLKIN ST FDNTKCKVD
Subjt:  ASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVD

XP_038895359.1 NDR1/HIN1-like protein 10 [Benincasa hispida]1.6e-7979.21Show/hide
Query:  MRSTTTQGEA---SSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRAS
        MRST TQGE    SSKQSSYRQQ+GTAKRTR+IRIIGRSLL VIFLV LAIIICWLVV PKTPRL+VETG V  H+STHN+L ATI FTF++YNPNKRA+
Subjt:  MRSTTTQGEA---SSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRAS

Query:  IHMASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKV
        IHM SMRMIV S+G+RF S IP+FTLTP NQT LSS+  VNFEYPFG+ EEIDPEL FSAEVSYS+  W SKPRLLEIYCN LLLKIN STTFDNTKCKV
Subjt:  IHMASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKV

Query:  DL
        DL
Subjt:  DL

TrEMBL top hitse value%identityAlignment
A0A0A0LVK9 LEA_2 domain-containing protein1.1e-7373.1Show/hide
Query:  STTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMAS
        STT +GEASS + S + QN T K+TR+IRIIGRSLLSVIFLV LA++ICWLVVFPK PR+ VETG+V  H STHN+LNATI FT K YNPNKRAS+H+ S
Subjt:  STTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMAS

Query:  MRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        MRMIVTSMGQ FSS IPTF  TPGNQT LS +  VNF+YPFG++EEI+PELHFSAE+SYSVE WTS+PRLL IYCN LLL+IN + TF+NTKC VDL
Subjt:  MRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

A0A0A0LY09 Uncharacterized protein2.1e-6972.22Show/hide
Query:  MRSTTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHM
        MRSTTT              +G  KRTRLIR++GRSLL VIFLVAL +IICWLVV PK+PRL+VETGKV  H+ST ++LNATIAFT K+YNPNKRASIHM
Subjt:  MRSTTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHM

Query:  ASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVD
          MRMIV +MG RFSSAIP+FTLTP NQT LSS+  VNFEYPFGY EEI+PEL FSAEVSYS+++W SKPRLLEIYCN +LLKIN ST FDNTKCKVD
Subjt:  ASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVD

A0A1S3CGR5 NDR1/HIN1-like protein 123.6e-7474Show/hide
Query:  MRS-TTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIH
        MRS TTT+GEASS + S + QN T K+TR+IRIIGR LLSVIFLV LA++ICWLVVFPK PR VVETGKV  H STHN+LNATIAFT K YNPNKRASIH
Subjt:  MRS-TTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIH

Query:  MASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        + SMRMI+TSMGQ FSSA+P F  TPGNQT LS +  VNF+YPFG+REEI+PELHFSAE+SYSV  WTS+PRLL+IYCN LLL+IN + TF+NTKC VDL
Subjt:  MASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

A0A1S3CGS4 protein YLS9-like4.9e-7179.33Show/hide
Query:  NGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRFSSAIPT
        +G  KRTRLIR++GRSLL VIFLVAL +IICWLVV PKTPRL+VETGKV  H+ST ++LNATIAFT K+YNPNKRASIHM  MRMIV +MG RFSSAIP+
Subjt:  NGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRFSSAIPT

Query:  FTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        FTLTP NQT L S+  VNFEYPFGY EEI+PEL FSAEVSYSVE+W SKPRLLEIYCN LLLKIN STTFDNTKCKVDL
Subjt:  FTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

A0A5A7TF76 NDR1/HIN1-like protein 123.6e-7474Show/hide
Query:  MRS-TTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIH
        MRS TTT+GEASS + S + QN T K+TR+IRIIGR LLSVIFLV LA++ICWLVVFPK PR VVETGKV  H STHN+LNATIAFT K YNPNKRASIH
Subjt:  MRS-TTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIH

Query:  MASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
        + SMRMI+TSMGQ FSSA+P F  TPGNQT LS +  VNF+YPFG+REEI+PELHFSAE+SYSV  WTS+PRLL+IYCN LLL+IN + TF+NTKC VDL
Subjt:  MASMRMIVTSMGQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL

SwissProt top hitse value%identityAlignment
Q8VZ13 Uncharacterized protein At1g081609.1e-0627.86Show/hide
Query:  QSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHN--LLNATIAFTFKTYNPNKRASIHMASMRMIVTSMG
        QS  R Q    +R   +  I  +L+ +  LV LAI+I +L + PK     VE   V      +N   +NA  ++  K+YNP K  S+   SMR+      
Subjt:  QSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHN--LLNATIAFTFKTYNPNKRASIHMASMRMIVTSMG

Query:  QRFS-SAIPTFTLTPGNQTALSSS------ALVNFEYPFGYREE----IDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTT--FDNTKCKVD
        Q  +   I  F   P N+T + +       AL  F       E+    I+ E++ +A VSY    + S+ R L+  C  +++ +  S+   F    CK  
Subjt:  QRFS-SAIPTFTLTPGNQTALSSS------ALVNFEYPFGYREE----IDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTT--FDNTKCKVD

Query:  L
        L
Subjt:  L

Q9SJ52 NDR1/HIN1-like protein 101.3e-0430.33Show/hide
Query:  YRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVT--PHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRF
        YR+ +G      L+ +  + ++S+I ++ +A +I WL+V P+  +  V    +T   HTS  N+L   +A T    NPNKR  ++   +       G+RF
Subjt:  YRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVT--PHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRF

Query:  SSAIPTFTLTPGNQTALSSSAL
        S    T TLTP  Q   +++ L
Subjt:  SSAIPTFTLTPGNQTALSSSAL

Arabidopsis top hitse value%identityAlignment
AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family6.5e-0727.86Show/hide
Query:  QSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHN--LLNATIAFTFKTYNPNKRASIHMASMRMIVTSMG
        QS  R Q    +R   +  I  +L+ +  LV LAI+I +L + PK     VE   V      +N   +NA  ++  K+YNP K  S+   SMR+      
Subjt:  QSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHN--LLNATIAFTFKTYNPNKRASIHMASMRMIVTSMG

Query:  QRFS-SAIPTFTLTPGNQTALSSS------ALVNFEYPFGYREE----IDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTT--FDNTKCKVD
        Q  +   I  F   P N+T + +       AL  F       E+    I+ E++ +A VSY    + S+ R L+  C  +++ +  S+   F    CK  
Subjt:  QRFS-SAIPTFTLTPGNQTALSSS------ALVNFEYPFGYREE----IDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTT--FDNTKCKVD

Query:  L
        L
Subjt:  L

AT2G35980.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family9.3e-0630.33Show/hide
Query:  YRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVT--PHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRF
        YR+ +G      L+ +  + ++S+I ++ +A +I WL+V P+  +  V    +T   HTS  N+L   +A T    NPNKR  ++   +       G+RF
Subjt:  YRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVT--PHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRF

Query:  SSAIPTFTLTPGNQTALSSSAL
        S    T TLTP  Q   +++ L
Subjt:  SSAIPTFTLTPGNQTALSSSAL

AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family5.3e-0925.67Show/hide
Query:  KRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTH-NLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRFSSAI-----
        +R  LI  I   +L++IF+ A+  +I WL   PK  R  VE   V     T+ N ++AT  FT +++NPN R S++ +S+ + V    Q  +        
Subjt:  KRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTH-NLLNATIAFTFKTYNPNKRASIHMASMRMIVTSMGQRFSSAI-----

Query:  -PTFTLTPGNQTALSSSALVNFEYPFGYREE-----IDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL
         P   +   ++T ++ +  V+       R +     I  E+   A V + V  W S  R  +I C+ + + ++      N+ C  D+
Subjt:  -PTFTLTPGNQTALSSSALVNFEYPFGYREE-----IDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGCACTACTACACAAGGAGAAGCATCATCAAAACAAAGCTCCTATAGGCAACAAAATGGGACAGCAAAACGCACAAGACTCATAAGAATCATAGGAAGAAGCTT
GTTGAGTGTAATATTCCTTGTTGCTCTTGCAATTATCATATGTTGGCTTGTTGTTTTCCCTAAAACCCCACGTCTCGTTGTGGAAACTGGCAAAGTCACACCCCATACTT
CAACTCATAATTTGCTCAATGCCACCATAGCTTTCACTTTCAAAACCTATAACCCCAACAAAAGAGCCTCCATTCACATGGCTTCTATGAGGATGATAGTCACTAGCATG
GGCCAGAGGTTTTCCTCCGCCATCCCCACGTTCACGCTCACGCCCGGAAACCAGACCGCCTTGTCCTCCTCTGCCCTAGTCAACTTCGAATACCCGTTTGGGTACAGGGA
AGAGATAGATCCAGAGCTTCACTTCTCAGCTGAAGTCAGTTACAGTGTCGAGAGATGGACATCGAAACCCCGTTTACTGGAAATCTATTGTAATCGCCTCTTGCTTAAGA
TCAATGGTTCTACAACTTTTGATAACACCAAATGCAAAGTGGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
CACTTCTTATAGATGAGAACAAATATCAAAAACCAAAAGAAGAAATTTGTGAAGAACAATGAGGAGCACTACTACACAAGGAGAAGCATCATCAAAACAAAGCTCCTATA
GGCAACAAAATGGGACAGCAAAACGCACAAGACTCATAAGAATCATAGGAAGAAGCTTGTTGAGTGTAATATTCCTTGTTGCTCTTGCAATTATCATATGTTGGCTTGTT
GTTTTCCCTAAAACCCCACGTCTCGTTGTGGAAACTGGCAAAGTCACACCCCATACTTCAACTCATAATTTGCTCAATGCCACCATAGCTTTCACTTTCAAAACCTATAA
CCCCAACAAAAGAGCCTCCATTCACATGGCTTCTATGAGGATGATAGTCACTAGCATGGGCCAGAGGTTTTCCTCCGCCATCCCCACGTTCACGCTCACGCCCGGAAACC
AGACCGCCTTGTCCTCCTCTGCCCTAGTCAACTTCGAATACCCGTTTGGGTACAGGGAAGAGATAGATCCAGAGCTTCACTTCTCAGCTGAAGTCAGTTACAGTGTCGAG
AGATGGACATCGAAACCCCGTTTACTGGAAATCTATTGTAATCGCCTCTTGCTTAAGATCAATGGTTCTACAACTTTTGATAACACCAAATGCAAAGTGGATCTTTGAGA
TTTGATCTGGGTGTGTTATTCTTGCTGAATAGTCCCAAAGATTTCTAAACTGGAAAAGATATGTAAAGAAAAGAATAATTATTTCTTCCATTTGAAG
Protein sequenceShow/hide protein sequence
MRSTTTQGEASSKQSSYRQQNGTAKRTRLIRIIGRSLLSVIFLVALAIIICWLVVFPKTPRLVVETGKVTPHTSTHNLLNATIAFTFKTYNPNKRASIHMASMRMIVTSM
GQRFSSAIPTFTLTPGNQTALSSSALVNFEYPFGYREEIDPELHFSAEVSYSVERWTSKPRLLEIYCNRLLLKINGSTTFDNTKCKVDL