; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G013830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G013830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationCicolChr01:26502003..26502335
RNA-Seq ExpressionCcUC01G013830
SyntenyCcUC01G013830
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]2.1e-3879.09Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSQ +KSD +KVLETPK LE GDRS EE   E L AA D + ESCRTPTSLRHRIP+A+SCPTTPRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SSSKRRCTSV
Subjt:  SSSKRRCTSV

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]1.6e-2572.22Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV
        MSQF+KSD QKVLE P+  E GDRS EE   E L AA   D ESCRTPTS +HRIP+A+SCPTTPRK++VV KRKFSDQSFFEATGRGE+
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3679.09Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSQF+KSDHQKV E PKP EEGDRSKEEDG      A D   ESCRTPTSLRHRIP ARS PTTPRKRKV SKRKFSDQSFFE TGRGEVESLF LFYRV
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SS+KRR T++
Subjt:  SSSKRRCTSV

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3778.18Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+F  SDHQK LE  KP EE DRSKEEDG E L A  DG  ESCRTP+SL+HRIP ARSCPTTPRK+KVVSKRKFSDQSFFE+T R EVESLFGLFYRV
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SS KRRCTS+
Subjt:  SSSKRRCTSV

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-3678.18Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSQF+KSDHQKV E PKP EEGDRSKEEDG      A D   ESCRTPTSLRHRIP ARS PTTPRKRK+ SKRKFSDQSFFE TGRGEVESLF LFYRV
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SS+KRR T++
Subjt:  SSSKRRCTSV

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein2.3e-2573.03Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGE
        MSQF+KSD QKVLE P+  E GDRS EE   E L AA   D ESCRTPTS +HRIP+A+SCPTTPRK++VV KRKFSDQSFFEATGRGE
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGE

A0A2C9V372 Uncharacterized protein1.1e-1148.96Show/hide
Query:  KEEDGDEVLPA----AADGDKESCRTPTSLRHRIPMARSCPTTPRKRK---VVSKRKFSDQSFFEATGRGEVESLFGLFY---RVSS--SKRRCTS
        K++DGDE++ A     +  D+E C+TPTS  H+IP  RSCP TPRK++   ++ KRKFS+  FFEA+ R EVES F   +   RV S   KRRC S
Subjt:  KEEDGDEVLPA----AADGDKESCRTPTSLRHRIPMARSCPTTPRKRK---VVSKRKFSDQSFFEATGRGEVESLFGLFY---RVSS--SKRRCTS

A0A2H5Q221 Uncharacterized protein2.4e-1150Show/hide
Query:  RSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV
        +++EE G+E+  A+ D   E C+TPTS  H+IP  +SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR21.0e-3879.09Show/hide
Query:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSQ +KSD +KVLETPK LE GDRS EE   E L AA D + ESCRTPTSLRHRIP+A+SCPTTPRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SSSKRRCTSV
Subjt:  SSSKRRCTSV

V4RSW1 Uncharacterized protein2.4e-1150Show/hide
Query:  RSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV
        +++EE G+E+  A+ D   E C+TPTS  H+IP  +SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV

SwissProt top hitse value%identityAlignment
Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR21.6e-0441.76Show/hide
Query:  KVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        + LE  K +E+  RS+EE+ D    +  +   ES  TPTS  H+IP   +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  KVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein1.1e-0541.76Show/hide
Query:  KVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        + LE  K +E+  RS+EE+ D    +  +   ES  TPTS  H+IP   +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  KVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAATTTTACAAATCCGATCACCAAAAGGTATTAGAAACCCCAAAGCCACTGGAAGAAGGTGATCGGAGCAAGGAGGAAGACGGCGATGAAGTGCTTCCGGCGGC
AGCGGATGGTGACAAAGAGAGCTGTCGAACTCCGACATCTCTTCGACATCGAATTCCGATGGCACGAAGCTGCCCGACGACGCCGAGAAAGCGGAAAGTCGTGAGCAAGA
GGAAATTTTCAGACCAAAGCTTCTTTGAGGCCACCGGAAGGGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCCAAAAGAAGATGTACAAGTGTA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAATTTTACAAATCCGATCACCAAAAGGTATTAGAAACCCCAAAGCCACTGGAAGAAGGTGATCGGAGCAAGGAGGAAGACGGCGATGAAGTGCTTCCGGCGGC
AGCGGATGGTGACAAAGAGAGCTGTCGAACTCCGACATCTCTTCGACATCGAATTCCGATGGCACGAAGCTGCCCGACGACGCCGAGAAAGCGGAAAGTCGTGAGCAAGA
GGAAATTTTCAGACCAAAGCTTCTTTGAGGCCACCGGAAGGGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCCAAAAGAAGATGTACAAGTGTA
TAA
Protein sequenceShow/hide protein sequence
MSQFYKSDHQKVLETPKPLEEGDRSKEEDGDEVLPAAADGDKESCRTPTSLRHRIPMARSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSSSKRRCTSV