; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G013960 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G013960
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr01:26731759..26754634
RNA-Seq ExpressionCcUC01G013960
SyntenyCcUC01G013960
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT76629.1 hypothetical protein VIGAN_01465800 [Vigna angularis var. angularis]9.5e-1063.41Show/hide
Query:  MKFSSPERVTLL---LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        MKF+SPE VTLL    +S +SF   +    S SS + S+FFFLCPVRS EQS+SSITIIDLLVVSI+S  + VLSFTAVSS+
Subjt:  MKFSSPERVTLL---LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

KAF8006012.1 hypothetical protein BT93_K0331 [Corymbia citriodora subsp. variegata]3.4e-1568.18Show/hide
Query:  DHIPSMKFSSPERVTLLLASSSSFFED----SLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        DH PSMKF SPERVTLL+ SS   F      SL   S S   FS FFFLCPVRS EQS+SSIT+IDLLVVSI S RS VLS TAVSSR
Subjt:  DHIPSMKFSSPERVTLLLASSSSFFED----SLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

PIN15784.1 hypothetical protein CDL12_11593 [Handroanthus impetiginosus]5.0e-1164.13Show/hide
Query:  ADHIPSMKFSSPERVT-LLLASSSSFFEDSLRG-----FSLSSVDFSSFFF-LCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD  PSMKF SP+ VT L L S S FF  SL G     F LSS    SFFF LCPVRSSEQS+SSITI+DLL VSI +  + VLSFTAVSSR
Subjt:  ADHIPSMKFSSPERVT-LLLASSSSFFEDSLRG-----FSLSSVDFSSFFF-LCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

PVH63289.1 hypothetical protein PAHAL_3G514500 [Panicum hallii]2.3e-0856.04Show/hide
Query:  ADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFLC------PVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD  PSMKFSSPE VTL+ +S S     S     L S   S FFF        PVRS+EQS+SS+T++DL VVS+KS+RS VL FTAVSSR
Subjt:  ADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFLC------PVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

RHN49969.1 hypothetical protein MtrunA17_Chr6g0452381 [Medicago truncatula]2.0e-1264.37Show/hide
Query:  ADHIPSMKFSSPERVTLL--LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD IPS+KF+ PERVTLL   +S S+FF  S    S S+  FS FFFLCPVRS EQSISSITIIDLL VSIKS+ + +LS T V+SR
Subjt:  ADHIPSMKFSSPERVTLL--LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

TrEMBL top hitse value%identityAlignment
A0A0A9R2F9 Uncharacterized protein3.3e-0855.56Show/hide
Query:  ADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFL-----CPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        ADH PSMK SSPE VTL+ +S S     S+    LSS   SSFFF       PVRS+EQS+SS+T++D  VVS+KS+R  VL  TAVSSR
Subjt:  ADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFL-----CPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A0S3R7P0 Uncharacterized protein4.6e-1063.41Show/hide
Query:  MKFSSPERVTLL---LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        MKF+SPE VTLL    +S +SF   +    S SS + S+FFFLCPVRS EQS+SSITIIDLLVVSI+S  + VLSFTAVSS+
Subjt:  MKFSSPERVTLL---LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A2G9HE43 Uncharacterized protein2.4e-1164.13Show/hide
Query:  ADHIPSMKFSSPERVT-LLLASSSSFFEDSLRG-----FSLSSVDFSSFFF-LCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD  PSMKF SP+ VT L L S S FF  SL G     F LSS    SFFF LCPVRSSEQS+SSITI+DLL VSI +  + VLSFTAVSSR
Subjt:  ADHIPSMKFSSPERVT-LLLASSSSFFEDSLRG-----FSLSSVDFSSFFF-LCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A2T8KME7 Uncharacterized protein1.1e-0856.04Show/hide
Query:  ADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFLC------PVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD  PSMKFSSPE VTL+ +S S     S     L S   S FFF        PVRS+EQS+SS+T++DL VVS+KS+RS VL FTAVSSR
Subjt:  ADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFLC------PVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A396H9M1 Uncharacterized protein9.9e-1364.37Show/hide
Query:  ADHIPSMKFSSPERVTLL--LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD IPS+KF+ PERVTLL   +S S+FF  S    S S+  FS FFFLCPVRS EQSISSITIIDLL VSIKS+ + +LS T V+SR
Subjt:  ADHIPSMKFSSPERVTLL--LASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGAAATTAGGACTCGGGCGTGGCTGGATCCTGGAGGTTTATTTGGCGGCAAAATGAGAAACCATTGGCGGGGTGAAATTGCTCTGGAGGGAAAGGGAAGCAAC
CCAACGTATTTGGAGATGGCTGCAAAGGAGACGAACAACCACTTGAACAATTGGCCACTGCAGTCTATCACTAAAGATCAGTTGGTTAAACCTGCAGGATTTACT
TCTGGAGATTCCCTCACGATTGCTGCACTTTTTACCCCTTCTAGAGTCTGGATCAATTTGCAAAGAAGTTTCTCAGGATCATCTTTTGGAGACTTGGGCATGAGG
TTCTCTGCAACGTCTGCAGGGGCTGACCATATTCCATCAATGAAGTTCAGCAGTCCCGAGAGAGTGACTTTACTGCTGGCCTCTTCATCTTCTTTCTTCGAGGAT
TCTTTGAGGGGTTTCTCTTTGTCATCTGTAGACTTTTCTTCTTTCTTCTTTCTCTGTCCTGTAAGATCAAGTGAGCAATCGATATCCTCAATCACAATTATTGAT
TTACTTGTCGTTTCAATCAAAAGCGTTCGAAGTTGTGTGTTGTCCTTCACAGCAGTGAGCTCCAGGGTGCTCAAATACTATGTGGCTCCACATGGTGTGGCTGTA
ATACCATCTACCACCAGAACCATTGAAATGACGAACGGCCTGCGGGCAAGATTGTTGAATCATAGCCCAAACAAACATGAAGCTTGCGATGGTTGGACCAACAGC
TGCCCACCACCCCGCCATAGATGCTGCTCCCATCCACATTGTTGTTGTGGTGTTCTGGTGAAGCTGCTCCCCAGCAGAGCTTATACCACTGAAAAAGAGATACAT
TTGTGGAAGAGTGAGATTGAAAGGCAAGTGAGAAAGAATGGGATGGCAACAGGAGTCGCATTTGCATACCCATGTGACCTGAAATTTCAAACATTTCTCAAGGTC
ATCTCTTGGAGACTTGGGCATGAGGTTCTCTGCAACATCAGCAGGGTGCTCAAATACTATATGGCTCCACATGGTGTGGCTGTAACTCCATCTTCCACCGGAACC
ATTGGTGTAAAGCTTCCTTTGCCTGCAAACATGAAGCTTGCAATTGTTGGACCAGCTGCTACCCATGAACCCGCCATTGAAGCTGCTCCCACCCACATCCCTCAA
GGCAACTGGGAGTGGAATTCTGGCACCCATGTCGCCACGTATTTGGATGTATTTGAGAGTAAAGGAATCGCACTCGAGAACAATGGAGATGCGGAGTTGGGAAAG
AGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAAATTAGGACTCGGGCGTGGCTGGATCCTGGAGGTTTATTTGGCGGCAAAATGAGAAACCATTGGCGGGGTGAAATTGCTCTGGAGGGAAAGGGAAGCAAC
CCAACGTATTTGGAGATGGCTGCAAAGGAGACGAACAACCACTTGAACAATTGGCCACTGCAGTCTATCACTAAAGATCAGTTGGTTAAACCTGCAGGATTTACT
TCTGGAGATTCCCTCACGATTGCTGCACTTTTTACCCCTTCTAGAGTCTGGATCAATTTGCAAAGAAGTTTCTCAGGATCATCTTTTGGAGACTTGGGCATGAGG
TTCTCTGCAACGTCTGCAGGGGCTGACCATATTCCATCAATGAAGTTCAGCAGTCCCGAGAGAGTGACTTTACTGCTGGCCTCTTCATCTTCTTTCTTCGAGGAT
TCTTTGAGGGGTTTCTCTTTGTCATCTGTAGACTTTTCTTCTTTCTTCTTTCTCTGTCCTGTAAGATCAAGTGAGCAATCGATATCCTCAATCACAATTATTGAT
TTACTTGTCGTTTCAATCAAAAGCGTTCGAAGTTGTGTGTTGTCCTTCACAGCAGTGAGCTCCAGGGTGCTCAAATACTATGTGGCTCCACATGGTGTGGCTGTA
ATACCATCTACCACCAGAACCATTGAAATGACGAACGGCCTGCGGGCAAGATTGTTGAATCATAGCCCAAACAAACATGAAGCTTGCGATGGTTGGACCAACAGC
TGCCCACCACCCCGCCATAGATGCTGCTCCCATCCACATTGTTGTTGTGGTGTTCTGGTGAAGCTGCTCCCCAGCAGAGCTTATACCACTGAAAAAGAGATACAT
TTGTGGAAGAGTGAGATTGAAAGGCAAGTGAGAAAGAATGGGATGGCAACAGGAGTCGCATTTGCATACCCATGTGACCTGAAATTTCAAACATTTCTCAAGGTC
ATCTCTTGGAGACTTGGGCATGAGGTTCTCTGCAACATCAGCAGGGTGCTCAAATACTATATGGCTCCACATGGTGTGGCTGTAACTCCATCTTCCACCGGAACC
ATTGGTGTAAAGCTTCCTTTGCCTGCAAACATGAAGCTTGCAATTGTTGGACCAGCTGCTACCCATGAACCCGCCATTGAAGCTGCTCCCACCCACATCCCTCAA
GGCAACTGGGAGTGGAATTCTGGCACCCATGTCGCCACGTATTTGGATGTATTTGAGAGTAAAGGAATCGCACTCGAGAACAATGGAGATGCGGAGTTGGGAAAG
AGAGGTTGATGGAGAGTGGATTTGCTCTATTTCTTTG
Protein sequenceShow/hide protein sequence
VEIRTRAWLDPGGLFGGKMRNHWRGEIALEGKGSNPTYLEMAAKETNNHLNNWPLQSITKDQLVKPAGFTSGDSLTIAALFTPSRVWINLQRSFSGSSFGDLGMR
FSATSAGADHIPSMKFSSPERVTLLLASSSSFFEDSLRGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSRVLKYYVAPHGVAV
IPSTTRTIEMTNGLRARLLNHSPNKHEACDGWTNSCPPPRHRCCSHPHCCCGVLVKLLPSRAYTTEKEIHLWKSEIERQVRKNGMATGVAFAYPCDLKFQTFLKV
ISWRLGHEVLCNISRVLKYYMAPHGVAVTPSSTGTIGVKLPLPANMKLAIVGPAATHEPAIEAAPTHIPQGNWEWNSGTHVATYLDVFESKGIALENNGDAELGK
RG