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CcUC01G014110 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G014110
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionprotein PXR1
Genome locationCicolChr01:26882685..26882960
RNA-Seq ExpressionCcUC01G014110
SyntenyCcUC01G014110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1269Show/hide
Query:  MGETSEEKQE-----KKEKKDKEKHGEEEEEEDDEKKK-------EKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPP
        MG TSEEK E     K++KKDKEKH EEEE++D  KKK       E ++K+KK+KDPAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAE NA P
Subjt:  MGETSEEKQE-----KKEKKDKEKHGEEEEEEDDEKKK-------EKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPP

KAG7012203.1 Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-1271.13Show/hide
Query:  MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKKKEKK-----EKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP
        MG  SEEK E K +K ++KH    EEE DEKKKEKK     +K+KK KDPADKKDP+KLRQKLEKLE KMQALAVKKEEILKLLHEAE N   APPP
Subjt:  MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKKKEKK-----EKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP

KAG7019857.1 hypothetical protein SDJN02_18822, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-1371.57Show/hide
Query:  MGETSEEKQE-----KKEKKDKEKHGEEEEEEDD--------EKKKEKKEKK-KKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA
        MG TSEEK E     K++KKDKEKH EEEEEEDD        +K KE+ EKK KK+KDPAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAE NA
Subjt:  MGETSEEKQE-----KKEKKDKEKHGEEEEEEDD--------EKKKEKKEKK-KKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA

Query:  PP
         P
Subjt:  PP

XP_008437610.1 PREDICTED: protein PXR1 [Cucumis melo]1.0e-1778.72Show/hide
Query:  MGETSEEKQ----EKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS
        MGETSEEK     EKKEKKDKEKHGE E+EE        K+KKKKEK+PADKKDP+KLRQKLEKLEAKMQALAVKKEEILKLLHEAE N PPPS
Subjt:  MGETSEEKQ----EKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS

XP_022994123.1 protein PXR1 [Cucurbita maxima]7.0e-1165.69Show/hide
Query:  MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKK--------KEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP
        MG  SEEK E K +K ++KH EE +E+  EKK        KE ++K+KK KDPADKKDP+KLRQKLEKLE KMQALAVKKEE+LKLLHEAE N   APPP
Subjt:  MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKK--------KEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP

Query:  SS
        SS
Subjt:  SS

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein6.4e-1878.57Show/hide
Query:  MGETSE-------EKQEKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPSS
        MGETSE       EK+EKKEKKDKEKHGEE E+E      EKK+KKKKEKDPADKKDP+KLRQKLEKLE KMQALAVKKEEILKLLHEAE N PPPSS
Subjt:  MGETSE-------EKQEKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPSS

A0A1S3AV24 protein PXR14.9e-1878.72Show/hide
Query:  MGETSEEKQ----EKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS
        MGETSEEK     EKKEKKDKEKHGE E+EE        K+KKKKEK+PADKKDP+KLRQKLEKLEAKMQALAVKKEEILKLLHEAE N PPPS
Subjt:  MGETSEEKQ----EKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS

A0A6J1C8D9 nucleolar protein 583.4e-1168.93Show/hide
Query:  MGETSE--------EKQEKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA----PP
        MGE SE        EK+EKKEKKDKEKH EE E  + EKKKEKKEKKK  K+P DKKDP+KLRQKLEKLE KM+ LA+KKEE+LKLL EAE NA    PP
Subjt:  MGETSE--------EKQEKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA----PP

Query:  PSS
        PSS
Subjt:  PSS

A0A6J1E7S6 protein PXR12.9e-1065Show/hide
Query:  MGETSEEKQE-----KKEKKDKEKHGEEEEEEDDEKKKEK-------KEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPP
        MG TSEEK E     K++KKDKEKH EEE++   +K K+K       ++K+KK+KDPAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAE NA P
Subjt:  MGETSEEKQE-----KKEKKDKEKHGEEEEEEDDEKKKEK-------KEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPP

A0A6J1K499 protein PXR13.4e-1165.69Show/hide
Query:  MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKK--------KEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP
        MG  SEEK E K +K ++KH EE +E+  EKK        KE ++K+KK KDPADKKDP+KLRQKLEKLE KMQALAVKKEE+LKLLHEAE N   APPP
Subjt:  MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKK--------KEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP

Query:  SS
        SS
Subjt:  SS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein1.2e-0853.06Show/hide
Query:  EEKQEKKEKKDK---EKHGEEEEEEDDEKKKEKKEKK-KKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEH--------NAPPPSS
        +EK++ K+KKDK   +K+G  EE ED EKK +KK+KK KKEK+P DKKDP KL+ KL+K+E K+QA+ +KK+EI+KL+H+AE         +APPP++
Subjt:  EEKQEKKEKKDK---EKHGEEEEEEDDEKKKEKKEKK-KKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEH--------NAPPPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAACCTCAGAAGAGAAGCAGGAGAAGAAGGAGAAGAAAGATAAAGAGAAACATGGAGAAGAAGAAGAAGAAGAAGATGATGAGAAGAAGAAGGAAAAGAAAGA
GAAGAAGAAGAAAGAGAAAGACCCTGCAGATAAGAAAGACCCATCAAAACTCAGACAGAAGCTTGAGAAGCTTGAGGCCAAGATGCAAGCTTTGGCTGTCAAGAAAGAAG
AGATCTTGAAACTGCTCCATGAAGCTGAACACAATGCTCCACCACCTTCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAACCTCAGAAGAGAAGCAGGAGAAGAAGGAGAAGAAAGATAAAGAGAAACATGGAGAAGAAGAAGAAGAAGAAGATGATGAGAAGAAGAAGGAAAAGAAAGA
GAAGAAGAAGAAAGAGAAAGACCCTGCAGATAAGAAAGACCCATCAAAACTCAGACAGAAGCTTGAGAAGCTTGAGGCCAAGATGCAAGCTTTGGCTGTCAAGAAAGAAG
AGATCTTGAAACTGCTCCATGAAGCTGAACACAATGCTCCACCACCTTCCTCTTAA
Protein sequenceShow/hide protein sequence
MGETSEEKQEKKEKKDKEKHGEEEEEEDDEKKKEKKEKKKKEKDPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPSS