; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G014790 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G014790
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationCicolChr01:27617523..27618424
RNA-Seq ExpressionCcUC01G014790
SyntenyCcUC01G014790
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99038.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.8e-9394.68Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_008465627.2 PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis melo]1.8e-9394.68Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]1.8e-9394.68Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]2.3e-9395.21Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAA GGGSRKSKK KRKT   PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

XP_038895169.1 uncharacterized protein At3g17950 [Benincasa hispida]1.2e-9495.74Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AATAA GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV TDQQRNGRSLFADGRVLPPA+TE+DTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

TrEMBL top hitse value%identityAlignment
A0A0A0LQI1 DDE Tnp4 domain-containing protein6.2e-9293.09Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT   PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTS A  LCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X18.7e-9494.68Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X28.7e-9494.68Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A5D3BLI7 Putative nuclease HARBI18.7e-9494.68Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AAT   GGGSRKSKKTKRKT T PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

A0A6J1E8Y2 uncharacterized protein At3g179501.1e-9395.21Show/hide
Query:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW
        MLNP NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAA GGGSRKSKK KRKT   PALVADRKRRWW
Subjt:  MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWW

Query:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
        RLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV  DQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Subjt:  RLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

SwissProt top hitse value%identityAlignment
Q6DR24 Uncharacterized protein At3g179507.7e-3952.2Show/hide
Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDD-
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A + A+   +R++ + KR           R+R+WWR CRDD 
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDD-

Query:  ------GV-------KPASLGEFLEVERRFGDGAFYGNA-VDLEGVVVT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC
              G+       K +SLGE+LEVERRFGD A Y +A  +LE  VV    DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGIC
Subjt:  ------GV-------KPASLGEFLEVERRFGDGAFYGNA-VDLEGVVVT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC

Query:  SGGAG
        SGG G
Subjt:  SGGAG

Arabidopsis top hitse value%identityAlignment
AT3G17950.1 unknown protein5.5e-4052.2Show/hide
Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDD-
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A + A+   +R++ + KR           R+R+WWR CRDD 
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDD-

Query:  ------GV-------KPASLGEFLEVERRFGDGAFYGNA-VDLEGVVVT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC
              G+       K +SLGE+LEVERRFGD A Y +A  +LE  VV    DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGIC
Subjt:  ------GV-------KPASLGEFLEVERRFGDGAFYGNA-VDLEGVVVT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGIC

Query:  SGGAG
        SGG G
Subjt:  SGGAG

AT3G17950.2 unknown protein1.9e-2445.35Show/hide
Query:  MGVSFPA---ITFRVPSQNR-DQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG
        MG SF A   + FR  S+       A + A+   +R++ + KR           R+R+WWR CRDD       G+       K +SLGE+LEVERRFGD 
Subjt:  MGVSFPA---ITFRVPSQNR-DQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRFGDG

Query:  AFYGNA-VDLEGVVVT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG
        A Y +A  +LE  VV    DQQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGICSGG G
Subjt:  AFYGNA-VDLEGVVVT---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG

AT5G02440.1 unknown protein7.5e-0538.66Show/hide
Query:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRK--------TITVPALVADRKRRWWRLCR
        SP+ SS SSSDLD++S GSFF DRS +LG L+G+ SF  ++ R    NR ++    AA      K+ KT  K         ++  A V    R       
Subjt:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRK--------TITVPALVADRKRRWWRLCR

Query:  DDGVKPA-SLGEFLEVERR
        +DG     SLG FL +ERR
Subjt:  DDGVKPA-SLGEFLEVERR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATCCAGTCAACGATCTGTTACCGCCGCCGTCTTCTCCGACCAATTCATCCATTTCCTCCTCCGATCTCGACACCGAGTCGACGGGTTCGTTCTTCCATGACAG
GAGCACGAGCTTGGGAACTCTAATGGGGGTCAGCTTTCCGGCGATTACTTTCCGAGTGCCCTCCCAGAACAGAGATCAACACGCCGCCGCGACTGCCGCCACAGGCGGCG
GTTCTCGGAAAAGCAAGAAGACCAAGAGAAAAACGATAACGGTGCCGGCACTGGTTGCAGATCGGAAACGGCGGTGGTGGAGGCTTTGCAGGGATGACGGCGTTAAGCCG
GCGTCTCTGGGTGAGTTTCTCGAAGTGGAACGGAGATTTGGGGATGGTGCTTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTGTGACGGATCAACAGAGGAATGG
CCGGTCTTTGTTCGCCGACGGAAGAGTTCTTCCGCCGGCACAAACCGAGGAAGATACATCGGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTTACCGGAATATGCA
GCGGCGGTGCCGGTTAA
mRNA sequenceShow/hide mRNA sequence
CAGACACAAAAAGGCTGCACTAACAATCATTTCAAAACCCATTTCAATTTTCTCCTTCCTTTCTCTCTCCTCCATTTCCATTTCCAAATCCTTAATCCTTTCTCTCTCCT
CTTCTTTGTTTTTATTTCTCATTCAAATTTCAGTCTCAGCTTCTCTATACAGACACGGCCAAAGAGATGTTGAATCCAGTCAACGATCTGTTACCGCCGCCGTCTTCTCC
GACCAATTCATCCATTTCCTCCTCCGATCTCGACACCGAGTCGACGGGTTCGTTCTTCCATGACAGGAGCACGAGCTTGGGAACTCTAATGGGGGTCAGCTTTCCGGCGA
TTACTTTCCGAGTGCCCTCCCAGAACAGAGATCAACACGCCGCCGCGACTGCCGCCACAGGCGGCGGTTCTCGGAAAAGCAAGAAGACCAAGAGAAAAACGATAACGGTG
CCGGCACTGGTTGCAGATCGGAAACGGCGGTGGTGGAGGCTTTGCAGGGATGACGGCGTTAAGCCGGCGTCTCTGGGTGAGTTTCTCGAAGTGGAACGGAGATTTGGGGA
TGGTGCTTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTGTGACGGATCAACAGAGGAATGGCCGGTCTTTGTTCGCCGACGGAAGAGTTCTTCCGCCGGCACAAA
CCGAGGAAGATACATCGGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTTACCGGAATATGCAGCGGCGGTGCCGGTTAAAATGTGGGATTTGATTTGTCCATTATG
TTTAAAATGTTATATTATATTTAATTAATCAAATGCTTTAATTAATGTGGAAG
Protein sequenceShow/hide protein sequence
MLNPVNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAATGGGSRKSKKTKRKTITVPALVADRKRRWWRLCRDDGVKP
ASLGEFLEVERRFGDGAFYGNAVDLEGVVVTDQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG