; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G015900 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G015900
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptiontranscription factor TCP13-like
Genome locationCicolChr01:28758696..28771132
RNA-Seq ExpressionCcUC01G015900
SyntenyCcUC01G015900
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584403.1 Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7672.35Show/hide
Query:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP
        +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTRF+IDKLP
Subjt:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP

Query:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----
        PLHFPKDFDPNAS LH          H DI+DAA KAK+EET   LLL KLS      S SALQ++TNA+  NCCHF+PPSFPFPLMDQ NP SFS    
Subjt:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----

Query:  ---FCPLTMPSEAPELL
           F PLTMP E    L
Subjt:  ---FCPLTMPSEAPELL

KAG7019990.1 Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-14575.55Show/hide
Query:  MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFD
        MAKASSS  QTLKRYIKKPWEITGPCADPEY+ AVPSA+EYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFD
Subjt:  MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQKFFVLWEMFSPACILQLCFSFNEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKG
        PADFPKVYLTAAIEEDINARGG         EM     +  +     +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KG
Subjt:  PADFPKVYLTAAIEEDINARGGGYQKFFVLWEMFSPACILQLCFSFNEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKG

Query:  LRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS-
        LRDRRIRLS PTAIQLYDLQN+LGLS+PSKVIDWLIDVTRF+IDKLPPLHFPKDFDPNAS LH          H DI+DAA KAK+EET   LLL KLS 
Subjt:  LRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS-

Query:  -----SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-------FCPLTMPSEAPELL
             S SALQ++TNA+  NCCHF+PPSFPFPLMDQ NP SFS       F PLTMP E    L
Subjt:  -----SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-------FCPLTMPSEAPELL

XP_023001048.1 transcription factor TCP13-like [Cucurbita maxima]6.7e-7772.81Show/hide
Query:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP
        +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLP
Subjt:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP

Query:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----
        PLHFPKDFDPNAS LH          HFDIADAA KAK+EET   LLL K S      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ NP SFS    
Subjt:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----

Query:  ---FCPLTMPSEAPELL
           F PLTMP E    L
Subjt:  ---FCPLTMPSEAPELL

XP_023519980.1 transcription factor TCP13-like [Cucurbita pepo subsp. pepo]4.3e-7671.89Show/hide
Query:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP
        +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTRF+IDKLP
Subjt:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP

Query:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----
        PLHFPKDFDPNAS LH          H DIADA  KAK+EET   LLL KLS      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ NP SFS    
Subjt:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----

Query:  ---FCPLTMPSEAPELL
           F P+T+P E    L
Subjt:  ---FCPLTMPSEAPELL

XP_038895251.1 transcription factor PCF6 [Benincasa hispida]1.3e-9992.75Show/hide
Query:  EEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPK
        +EGVHDEAKQMEGKRKKAFLRGNPRI RVS LFGGKDRHSKVCT+KGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPK
Subjt:  EEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPK

Query:  DFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSFCPLTMPSE
        DFDPNASILHHSSL  PQIPHFDIADAAV AKNEETD RLLLHKLSSLSALQVQTNAI  NCCHF+PPSFPFPLMDQ +P SFSFCPLTMPSE
Subjt:  DFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSFCPLTMPSE

TrEMBL top hitse value%identityAlignment
A0A0A0LTI3 TCP domain-containing protein2.3e-7074.74Show/hide
Query:  EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK
        EEG HDEAKQ +GK KKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK
Subjt:  EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK

Query:  LPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLM-DQINPVSFSF
        LPPL FPKDFDPNASILHHS          DI DAA KAKNEETDH LL           VQTN ING C HFEPP+FPFP M DQ N   FSF
Subjt:  LPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLM-DQINPVSFSF

A0A1S3BEN2 transcription factor TCP51.5e-6974.23Show/hide
Query:  EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK
        E+G HDEAKQMEGKRKKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK
Subjt:  EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK

Query:  LPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF
        LPPLHFPKDFDPNASILHHS +           DAA +KAKNEETD  LL           VQTN ING+  HFEPPSFPFP M Q N   FSF
Subjt:  LPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF

A0A5D3BIQ9 Transcription factor TCP51.5e-6974.23Show/hide
Query:  EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK
        E+G HDEAKQMEGKRKKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK
Subjt:  EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDK

Query:  LPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF
        LPPLHFPKDFDPNASILHHS +           DAA +KAKNEETD  LL           VQTN ING+  HFEPPSFPFP M Q N   FSF
Subjt:  LPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF

A0A6J1E7C6 transcription factor PCF8-like1.8e-7572.69Show/hide
Query:  EGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPP
        EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTR +IDKLPP
Subjt:  EGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPP

Query:  LHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-----
        LHFPKDFDPNAS L           H DIADAA KAK+EET   LLL KLS      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ NP SFS     
Subjt:  LHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-----

Query:  --FCPLTMPSEAPELL
          F PLTMP E    L
Subjt:  --FCPLTMPSEAPELL

A0A6J1KPD9 transcription factor TCP13-like3.2e-7772.81Show/hide
Query:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP
        +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLP
Subjt:  EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP

Query:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----
        PLHFPKDFDPNAS LH          HFDIADAA KAK+EET   LLL K S      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ NP SFS    
Subjt:  PLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS----

Query:  ---FCPLTMPSEAPELL
           F PLTMP E    L
Subjt:  ---FCPLTMPSEAPELL

SwissProt top hitse value%identityAlignment
A2XMN1 Transcription factor PCF61.2e-2050Show/hide
Query:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDI
        RI+RV    GGKDRHSKV T KG+RDRR+RLSV TAIQ YDLQ++LG  QPSK I+WLI+     ID LP L      DP A         F  IPH   
Subjt:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDI

Query:  ADAAVKAKNEETDHRLLLHK
        ADAA   +  +   + L +K
Subjt:  ADAAVKAKNEETDHRLLLHK

Q10CE8 Transcription factor PCF61.3e-1950Show/hide
Query:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDI
        RI+RV    GGKDRHSKV T KG+RDRR+RLSV TAIQ YDLQ++LG  QPSK I+WLI+     ID LP L      DP A         F  IPH   
Subjt:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDI

Query:  ADAAVKAKNEETDHRLLLHK
        ADAA   +  +   + L +K
Subjt:  ADAAVKAKNEETDHRLLLHK

Q9FME3 Transcription factor TCP54.4e-3176.54Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFD
        NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSVPTAIQLYDLQ++LGLSQPSKVIDWL++  + ++DKLPPL FP  F+
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFD

Q9LEZ9 Transcription factor TCP173.7e-3051.7Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDF---DPNASILHHSSLLFPQI
        NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSV TAIQ+YDLQ +LGLSQPSKVIDWL++V + ++D LPPL FP  F   +PN + L  S   FP +
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDF---DPNASILHHSSLLFPQI

Query:  PHFDIADAAVKAKNEETDHRLLL-HKLSSLSALQVQTNAINGNCCHF
          FD+     +A + E    + L H    +      +N+I  N  +F
Subjt:  PHFDIADAAVKAKNEETDHRLLL-HKLSSLSALQVQTNAINGNCCHF

Q9S7W5 Transcription factor TCP132.1e-2865.96Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL
        +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPL    +   N SI  HH S L
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL

Arabidopsis top hitse value%identityAlignment
AT3G02150.1 plastid transcription factor 11.5e-2965.96Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL
        +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPL    +   N SI  HH S L
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL

AT3G02150.2 plastid transcription factor 11.5e-2965.96Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL
        +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPL    +   N SI  HH S L
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL

AT5G08060.1 unknown protein2.7e-4465.35Show/hide
Query:  MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-F
        ++ A+SSL+Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  E+AIVP+S+PETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K F
Subjt:  MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-F

Query:  DPADFPKVYLTAAIEEDINARGGGYQK
        D +DFPKVYLT  +EED++ RGGGY+K
Subjt:  DPADFPKVYLTAAIEEDINARGGGYQK

AT5G08070.1 TCP domain protein 172.7e-3151.7Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDF---DPNASILHHSSLLFPQI
        NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSV TAIQ+YDLQ +LGLSQPSKVIDWL++V + ++D LPPL FP  F   +PN + L  S   FP +
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDF---DPNASILHHSSLLFPQI

Query:  PHFDIADAAVKAKNEETDHRLLL-HKLSSLSALQVQTNAINGNCCHF
          FD+     +A + E    + L H    +      +N+I  N  +F
Subjt:  PHFDIADAAVKAKNEETDHRLLL-HKLSSLSALQVQTNAINGNCCHF

AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 53.1e-3276.54Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFD
        NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSVPTAIQLYDLQ++LGLSQPSKVIDWL++  + ++DKLPPL FP  F+
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTC
CCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCTCCAATCCCGAGACGGTCTTCGACATCAAGTATTACACC
CGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTTCCC
AAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCGTGGAGGTGGTTATCAGAAGTTCTTTGTGCTCTGGGAAATGTTCTCTCCAGCTTGTATTCTT
CAACTCTGCTTCTCTTTCAATGAAGAGGGTGTTCATGATGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGG
GTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTT
TATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGTCATAGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCGCCACTCCATTTT
CCAAAAGATTTTGACCCAAATGCCTCAATTCTTCATCATTCTTCACTGCTTTTTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAAT
GAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTTATCTGCTCTTCAAGTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCA
AGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATTTTCCTTCTGTCCCTTGACGATGCCGTCTGAAGCGCCTGAGCTTCTGAACCAAGTTGTCAAT
GTTTTGCAGTTTCTTGCGGTTGATTTCCGTGCTAAGACTGGGCTCCCCAATGTTATCTGCAGCACTCCATTGATGGAGGAGTTGGTGGTCGAGATCCAACAAAGA
AGAATCCACGAAGAGAAGGAGCTAATGGGTCAGGGTCAACGACGAATGGCGAGGGCAGAAACAGAAACAGAGAGC
mRNA sequenceShow/hide mRNA sequence
CGCTTCGTTATTTCGTCGGAAGAATTTTGGGTTGCTTCGCTCAGCTTCGCTGCCGTTCACCATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTA
CATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTCCCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAA
GGAGAAAGCCATTGTCCCTACCTCCAATCCCGAGACGGTCTTCGACATCAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCT
CAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTTCCCAAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCG
TGGAGGTGGTTATCAGAAGTTCTTTGTGCTCTGGGAAATGTTCTCTCCAGCTTGTATTCTTCAACTCTGCTTCTCTTTCAATGAAGAGGGTGTTCATGATGAAGC
AAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTTTG
TACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGT
CATAGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCGCCACTCCATTTTCCAAAAGATTTTGACCCAAATGCCTCAATTCTTCATCATTCTTC
ACTGCTTTTTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAATGAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTT
ATCTGCTCTTCAAGTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCAAGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATT
TTCCTTCTGTCCCTTGACGATGCCGTCTGAAGCGCCTGAGCTTCTGAACCAAGTTGTCAATGTTTTGCAGTTTCTTGCGGTTGATTTCCGTGCTAAGACTGGGCT
CCCCAATGTTATCTGCAGCACTCCATTGATGGAGGAGTTGGTGGTCGAGATCCAACAAAGAAGAATCCACGAAGAGAAGGAGCTAATGGGTCAGGGTCAACGACG
AATGGCGAGGGCAGAAACAGAAACAGAGAGC
Protein sequenceShow/hide protein sequence
MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFP
KVYLTAAIEEDINARGGGYQKFFVLWEMFSPACILQLCFSFNEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQL
YDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPP
SFPFPLMDQINPVSFSFCPLTMPSEAPELLNQVVNVLQFLAVDFRAKTGLPNVICSTPLMEELVVEIQQRRIHEEKELMGQGQRRMARAETETES