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CcUC01G016540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G016540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr01:29269616..29269969
RNA-Seq ExpressionCcUC01G016540
SyntenyCcUC01G016540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584453.1 hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1187.5Show/hide
Query:  QPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSL
        QPSFCGV+ K +TNGIHHSSEMVAEFNAANPTCSTLYF L
Subjt:  QPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSL
KGN63987.1 hypothetical protein Csa_014108 [Cucumis sativus]3.3e-2690.48Show/hide
Query:  MPAICFDHITFQCLLDFQPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSLYHRLIT
        MPAICFDHI FQCLLDFQPSFCGVKGK +TNGIHHSS+MVAEFNAANPTCS+LYFSLYH LIT
Subjt:  MPAICFDHITFQCLLDFQPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSLYHRLIT
TrEMBL top hitse value%identityAlignment
A0A0A0LTA5 Uncharacterized protein1.6e-2690.48Show/hide
Query:  MPAICFDHITFQCLLDFQPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSLYHRLIT
        MPAICFDHI FQCLLDFQPSFCGVKGK +TNGIHHSS+MVAEFNAANPTCS+LYFSLYH LIT
Subjt:  MPAICFDHITFQCLLDFQPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSLYHRLIT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCGGAAGCAGCTGTTAGATGGATGTTTTGTTATTATCCAAACAAGTCAGCAATGGATCAATCTTGTCATGCCTGCCATATGCTTTGATCACATAACTTTTCAGTGTTT
ACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGGAAGGACCAATGGGATCCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTT
CCACCTTATATTTTTCTCTGTACCATCGCTTAATTACATGA
mRNA sequenceShow/hide mRNA sequence
TGGCGGAAGCAGCTGTTAGATGGATGTTTTGTTATTATCCAAACAAGTCAGCAATGGATCAATCTTGTCATGCCTGCCATATGCTTTGATCACATAACTTTTCAGTGTTT
ACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGGAAGGACCAATGGGATCCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTT
CCACCTTATATTTTTCTCTGTACCATCGCTTAATTACATGA
Protein sequenceShow/hide protein sequence
WRKQLLDGCFVIIQTSQQWINLVMPAICFDHITFQCLLDFQPSFCGVKGKGRTNGIHHSSEMVAEFNAANPTCSTLYFSLYHRLIT