; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G017090 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G017090
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionribosome-binding factor PSRP1, chloroplastic
Genome locationCicolChr02:1596..6266
RNA-Seq ExpressionCcUC02G017090
SyntenyCcUC02G017090
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]2.6e-13973.2Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN
        MATLTSSMQANLLS HSL  S    SSS++S+FPASFSLHFSALKVHALSSN SAFFNSCK+FGTIET SR+RHASNSF++RM+WDG LSSVKLIVQGKN
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN

Query:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH
        LEL +                                                                             +KKHVEEKVGKAVQKHSH
Subjt:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH

Query:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ
        LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+KGFDR KVREPAPIVVEDEEEEVFQ
Subjt:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ

Query:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLEPVT+EA REPSLAE
Subjt:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

XP_008460813.1 PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo]4.5e-13973.2Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN
        MATLTSSMQANLLS HSL       SSS++S+FPA FSLHFSALKVHALSSN SAFFNSCK+FGTIET SR+RHASNSF++RM+WDGHLSSVKLIVQGKN
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN

Query:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH
        LEL +                                                                             +KKHVEEKVGKAVQKHSH
Subjt:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH

Query:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ
        LVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+KGFDR KVREPAPIVVEDEEEEVFQ
Subjt:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ

Query:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLEPVTVEAAREPSLAE
Subjt:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]2.8e-12568.27Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIV
        MATLTSSM  NLLS        + SSSS+ S FPASFSL    + SALK+H LSS+TS FFNSC  F TI+   R+RHA+NSF +RMSWDG LSSVKLIV
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIV

Query:  QGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQ
        QGKNLEL +                                                                             +KKHVEEKVGKAVQ
Subjt:  QGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQ

Query:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVED--E
        KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVED  E
Subjt:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVED--E

Query:  EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG+AEKLEPVTVE AREPSLAE
Subjt:  EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]2.8e-12567.68Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCK-SFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLI
        MA LTSSMQ NLLS HSL+ S+SSSSSS++S FP SFSL    + + LK HALSS+ SAFFNSC   F TI    R RHA+ SF++RMSWDG LSSVKLI
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCK-SFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLI

Query:  VQGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAV
        VQGKNLEL +                                                                             +KKHVEEKVGKAV
Subjt:  VQGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAV

Query:  QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEE
        QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVVEDEE
Subjt:  QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEE

Query:  EEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AEK+E VTVE ARE SLAE
Subjt:  EEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

XP_038900446.1 ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida]9.7e-13472.31Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHAL--SSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQG
        MA LTSSM  +LL  HSLSSS SSSSSS+ISFFPASFSLHFSALKVHAL  SS  SAFFNSCKSF T ET SR+RHASNSFNVRMSWDG LSSVKLIVQ 
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHAL--SSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQG

Query:  KNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKH
        KNLEL +                                                                             +KKHVEEKVGKAVQKH
Subjt:  KNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKH

Query:  SHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEV
        SHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR KVREPAPIVVEDE+EEV
Subjt:  SHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEV

Query:  FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        F+ED GEVIDEIVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG+AEKLE VT++AAREPSLAE
Subjt:  FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic2.2e-13973.2Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN
        MATLTSSMQANLLS HSL       SSS++S+FPA FSLHFSALKVHALSSN SAFFNSCK+FGTIET SR+RHASNSF++RM+WDGHLSSVKLIVQGKN
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN

Query:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH
        LEL +                                                                             +KKHVEEKVGKAVQKHSH
Subjt:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH

Query:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ
        LVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+KGFDR KVREPAPIVVEDEEEEVFQ
Subjt:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ

Query:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLEPVTVEAAREPSLAE
Subjt:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP12.2e-13973.2Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN
        MATLTSSMQANLLS HSL       SSS++S+FPA FSLHFSALKVHALSSN SAFFNSCK+FGTIET SR+RHASNSF++RM+WDGHLSSVKLIVQGKN
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKN

Query:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH
        LEL +                                                                             +KKHVEEKVGKAVQKHSH
Subjt:  LELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSH

Query:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ
        LVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+KGFDR KVREPAPIVVEDEEEEVFQ
Subjt:  LVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQ

Query:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLEPVTVEAAREPSLAE
Subjt:  EDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic1.4e-12568.27Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIV
        MATLTSSM  NLLS        + SSSS+ S FPASFSL    + SALK+H LSS+TS FFNSC  F TI+   R+RHA+NSF +RMSWDG LSSVKLIV
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIV

Query:  QGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQ
        QGKNLEL +                                                                             +KKHVEEKVGKAVQ
Subjt:  QGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQ

Query:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVED--E
        KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVED  E
Subjt:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVED--E

Query:  EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG+AEKLEPVTVE AREPSLAE
Subjt:  EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic1.4e-12567.68Show/hide
Query:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCK-SFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLI
        MA LTSSMQ NLLS HSL+ S+SSSSSS++S FP SFSL    + + LK HALSS+ SAFFNSC   F TI    R RHA+ SF++RMSWDG LSSVKLI
Subjt:  MATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCK-SFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLI

Query:  VQGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAV
        VQGKNLEL +                                                                             +KKHVEEKVGKAV
Subjt:  VQGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAV

Query:  QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEE
        QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVVEDEE
Subjt:  QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEE

Query:  EEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        EEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AEK+E VTVE ARE SLAE
Subjt:  EEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic1.0e-12067.73Show/hide
Query:  SSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCK-SFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKNLELEDCSLVKESG
        SSS+SSSSSS++S FP SFSL    + + LK+HALSS+ SAFFNSC   F TI    R RHA+ SF++RMSWDG LSSVKLIVQGKNLEL +        
Subjt:  SSSTSSSSSSSISFFPASFSL----HFSALKVHALSSNTSAFFNSCK-SFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKNLELEDCSLVKESG

Query:  KRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSHLVREVDVRLSVRG
                                                                             +KKHVEEKVGKAVQKHSHLVREVDVRLSVRG
Subjt:  KRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSHLVREVDVRLSVRG

Query:  GEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRT
        GEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVVEDEEEEV QEDGGE IDEIVRT
Subjt:  GEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRT

Query:  KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
        KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE ARE SLAE
Subjt:  KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic7.8e-7848Show/hide
Query:  MATL-TSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFG---TIETPSRSRHASNSFNVRMSWDGHLSSVKLIV
        MATL TS++  N    +SLS+S + SS+ +                   LSS  S F NSC S G    +++   SR+  N   V MSWDG LSSVKLI+
Subjt:  MATL-TSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFG---TIETPSRSRHASNSFNVRMSWDGHLSSVKLIV

Query:  QGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQ
        QG+NLE+ D                                                                             ++ HVE+KVGK+V 
Subjt:  QGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQ

Query:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEE-
        KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+RAEEDAE++Y+SIDLVSSIIQRKLRKIK+K SD GRHMKGF+R KVR+P P+ +  EE 
Subjt:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEE-

Query:  -EEV------FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
         EEV         +  + I+E+VRTKYFDMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ GK EKLE + V+  ++PS AE
Subjt:  -EEV------FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE

P47908 Ribosome hibernation promotion factor1.4e-2639.67Show/hide
Query:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLK
        I  +VE K+ KA +       +VDV LSV      +     + EVT++     V+RA+E +E +YASIDLVS  I R+LRK KEK+  +  H++      
Subjt:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLK

Query:  VREPAPIVVEDE-EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
          + + ++ ED   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  VREPAPIVVEDE-EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor2.3e-2943.39Show/hide
Query:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD
        I  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+RA+E +E +YASIDLV+  I R+LRK KE+  D     K   
Subjt:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD

Query:  RLKVREPAPIVVEDE--EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE
         +K  E    +VED+  EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I P +
Subjt:  RLKVREPAPIVVEDE--EEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE

Q49VV1 Ribosome hibernation promotion factor3.8e-1633.33Show/hide
Query:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH---MKGFD
        I+ ++EEK+GK ++++ + V      + V+  +        + EVT+  KK   +RAEE  + +YA IDL+++ ++R++RK K + + R R+    + F 
Subjt:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH---MKGFD

Query:  RLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         L   E   + ++++E E   E       EI+R K F + P+  EEA+ Q+  + HDF+ F + ET   +I+YKRKDG YGLI
Subjt:  RLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Q9RVE7 Ribosome hibernation promotion factor1.7e-1631.89Show/hide
Query:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK-----IKEKDSDRGRHMKG
        ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G++RAEE    +YA+ID  S +++R+LRK     +K++   R   + G
Subjt:  IKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK-----IKEKDSDRGRHMKG

Query:  FDRLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
                PA   V  +      +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  FDRLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative3.3e-8756.79Show/hide
Query:  RSRHASNSFNVRMSWDGHLSSVKLIVQGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHI
        R  +  +S  V+MSWDG L+SVKLI+QGKNLEL +                                                                 
Subjt:  RSRHASNSFNVRMSWDGHLSSVKLIVQGKNLELEDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHI

Query:  KSSQQIRGILVIIKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSD
                    IK+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYA IDLVS+IIQRKLRKIKEKDSD
Subjt:  KSSQQIRGILVIIKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSD

Query:  RGRHMKGFDRLKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIP
         GRHMKGF+RLKVREP    VVED E+        +E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF+NEETGEINI+YKRK+GGYGLIIP
Subjt:  RGRHMKGFDRLKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIP

Query:  KENGKAEKLEPVTVEAAREPSLAE
        K++GKAEK+EP+  E   E S AE
Subjt:  KENGKAEKLEPVTVEAAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATGGCCACTCTCACCTCTTCCATGCAGGCCAATCTCCTTTCCCATCACTCCTTATCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCCATTTCTTTCTTT
CCAGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATACTTCTGCTTTCTTCAACTCCTGCAAGAGCTTTGGAACCATTGAGACT
CCATCCCGCAGCCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCACCTCTCCTCTGTCAAATTAATTGTCCAAGGGAAAAATTTGGAGCTA
GAAGATTGTTCCTTGGTCAAAGAATCAGGGAAACGCACGATGGCTACTTCATACTTCCCAATTTCAACCGTTATCTGCTTGAAGGAATCCTTTGTAAAATTGGAT
CAAGATATCTGTAGGCCCCTGTTTCTTTCACTTAATCCAAGACACACAACTCAAGCTTTATCATCCTGCTTAGATCTTGAACATGATACACACATCAAAAGCAGT
CAACAAATAAGGGGCATATTAGTAATTATTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGG
CTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATAAGAAGATGTGAGGTTACCTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCC
GAGACCGTCTATGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTT
GACAGATTGAAAGTACGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAAGAGGATGGTGGAGAAGTTATTGATGAGATTGTTCGGACA
AAATACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATTGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATT
AACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAAAGCTGAGAAATTAGAACCTGTCACAGTTGAAGCAGCCAGAGAA
CCATCCTTAGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATGGCCACTCTCACCTCTTCCATGCAGGCCAATCTCCTTTCCCATCACTCCTTATCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCCATTTCTTTCTTT
CCAGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATACTTCTGCTTTCTTCAACTCCTGCAAGAGCTTTGGAACCATTGAGACT
CCATCCCGCAGCCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCACCTCTCCTCTGTCAAATTAATTGTCCAAGGGAAAAATTTGGAGCTA
GAAGATTGTTCCTTGGTCAAAGAATCAGGGAAACGCACGATGGCTACTTCATACTTCCCAATTTCAACCGTTATCTGCTTGAAGGAATCCTTTGTAAAATTGGAT
CAAGATATCTGTAGGCCCCTGTTTCTTTCACTTAATCCAAGACACACAACTCAAGCTTTATCATCCTGCTTAGATCTTGAACATGATACACACATCAAAAGCAGT
CAACAAATAAGGGGCATATTAGTAATTATTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGG
CTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATAAGAAGATGTGAGGTTACCTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCC
GAGACCGTCTATGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTT
GACAGATTGAAAGTACGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAAGAGGATGGTGGAGAAGTTATTGATGAGATTGTTCGGACA
AAATACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATTGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATT
AACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAAAGCTGAGAAATTAGAACCTGTCACAGTTGAAGCAGCCAGAGAA
CCATCCTTAGCGGAATGATGGGAGTTCACGGAGGAATTTTCATGTTCTAGATATCTTGCCACTGTTACATTCGCTTAAAACTGCAAAACTTCGACTTCAACATGC
ATCTGAAGGCCTTTCTTGTAGAGAGTATATAGATTTAGATTCGAGGTTATTTGGTGATGAAGACAATATTGGAACAAGAAATCAGTAAAAAGTAAAATGAGATGC
AAAAAATATTCTATGGAATGAATGATTCAGCTTGCAGGGGTGTTACCATGAAAATATACTGTTTTCTTTTGTAATAATGGTTTCTTTTCCCCTAGCGTGGCCAGT
TCTGTTTATATTGTTGGTAGTTGAATATTGATTCATCTTTCTTCCTTTCCTAAAGAATCCCCCGGTCGCCACATTTTTACTTTATTCATATGTGACATGAATATT
CCTTGTCCCTACAACATTGATTAATGCAATAAAAATAGATAACTAGAAGTAATATTTGTTCCATGATGAGGTTGGATAAGAATTAGCATGGGAGTCCAC
Protein sequenceShow/hide protein sequence
MVMATLTSSMQANLLSHHSLSSSTSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKNLEL
EDCSLVKESGKRTMATSYFPISTVICLKESFVKLDQDICRPLFLSLNPRHTTQALSSCLDLEHDTHIKSSQQIRGILVIIKKHVEEKVGKAVQKHSHLVREVDVR
LSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRT
KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE