; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G017480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G017480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr02:395224..395679
RNA-Seq ExpressionCcUC02G017480
SyntenyCcUC02G017480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040748.1 hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa]1.5e-5881.58Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        NA SAESP+ D+G+R N ED +N DQR+SNSSSN+S+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

KAE8651991.1 hypothetical protein Csa_016945 [Cucumis sativus]1.8e-4872.19Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVSLGIG +               
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
                 D+G+R N ED +N DQR SNSSSN+S+ SRESEMPLAITM S
Subjt:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]2.6e-5881.58Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        NA SAESP+ D+G+R N ED +N DQR+SNSSSN+S+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

XP_011649431.1 putative uncharacterized protein DDB_G0284715 [Cucumis sativus]1.2e-6084.11Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVSLGIG +V +NNANANNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
         +SAES Q D+G+R N ED +N DQR SNSSSN+S+ SRESEMPLAITM S
Subjt:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]2.1e-6892.05Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVS+GIGV+VGA+NANANNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        NASAESP+ D GDR +EED DNGDQRRSNSSSN+S+ASRESEMPLAITMGS
Subjt:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

TrEMBL top hitse value%identityAlignment
A0A0A0LJX6 Uncharacterized protein6.0e-6184.11Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVSLGIG +V +NNANANNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
         +SAES Q D+G+R N ED +N DQR SNSSSN+S+ SRESEMPLAITM S
Subjt:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

A0A1S3CDW9 Uncharacterized protein1.2e-5881.58Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        NA SAESP+ D+G+R N ED +N DQR+SNSSSN+S+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

A0A5A7TCV0 Uncharacterized protein7.3e-5981.58Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        NA SAESP+ D+G+R N ED +N DQR+SNSSSN+S+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

A0A6J1EV39 uncharacterized protein LOC1114383195.8e-4871.52Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPETE+TAWLPVAGLSLVCLPWFFW+LTFFYRVISRACGFRVSL +     AN+ N ++NNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        N+S ESP+CD   +A EEDG+N DQRRSN SSN+S+ SRESE+P AI+MGS
Subjt:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

A0A6J1G7P7 uncharacterized protein LOC1114515882.1e-4571.52Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLV+PS GR  IWIVT  LF S++SGGGCLLMY+ LPETE TAWLPVAGLSLVCLPWFFW LTF YR+ISRACGFRVSLG+ V   A  A  NN N +N
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS
        N   ESPQ D G +AN+ED   G+QR+SNSSSN S ASRESE PLAITMGS
Subjt:  NASAESPQCDLGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein9.8e-2444.79Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        M + +P AG+AFI ++T FLF SI  GGGCL+ Y ILP      WL   G+  VCLPWFFW+LTF YR++SR  GFR+ +G     G NN NAN      
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  N-----ASAESPQCDLGDRANEEDGD-------NGDQRRSNSSSNDSVASRESEMPLAITMGS
        +      S ESP  D  +      G        N  ++R ++SSN ++AS ESEMPLAI+M S
Subjt:  N-----ASAESPQCDLGDRANEEDGD-------NGDQRRSNSSSNDSVASRESEMPLAITMGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTTTCCATTGTCAGCGGCGGTGGTTGTCTTTTGATGTACATGATCCT
CCCTGAGACCGAAACTACCGCTTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTCTTAACTTTCTTCTATAGAGTCATCTCACGTGCAT
GTGGTTTTAGAGTCTCCCTTGGTATTGGTGTGGAGGTAGGTGCAAATAACGCAAATGCCAATAATAATAATAATAACAATAATGCATCTGCTGAATCCCCTCAATGCGAT
TTGGGAGATCGAGCTAATGAGGAGGACGGCGACAATGGCGATCAAAGGCGAAGCAATTCGTCATCCAACGACTCAGTAGCATCTCGTGAGAGTGAAATGCCATTAGCCAT
AACAATGGGGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTTTCCATTGTCAGCGGCGGTGGTTGTCTTTTGATGTACATGATCCT
CCCTGAGACCGAAACTACCGCTTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTCTTAACTTTCTTCTATAGAGTCATCTCACGTGCAT
GTGGTTTTAGAGTCTCCCTTGGTATTGGTGTGGAGGTAGGTGCAAATAACGCAAATGCCAATAATAATAATAATAACAATAATGCATCTGCTGAATCCCCTCAATGCGAT
TTGGGAGATCGAGCTAATGAGGAGGACGGCGACAATGGCGATCAAAGGCGAAGCAATTCGTCATCCAACGACTCAGTAGCATCTCGTGAGAGTGAAATGCCATTAGCCAT
AACAATGGGGTCGTAA
Protein sequenceShow/hide protein sequence
MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNNNASAESPQCD
LGDRANEEDGDNGDQRRSNSSSNDSVASRESEMPLAITMGS