; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G017600 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G017600
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMYB transcription factor
Genome locationCicolChr02:482538..485590
RNA-Seq ExpressionCcUC02G017600
SyntenyCcUC02G017600
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040758.1 transcriptional activator Myb [Cucumis melo var. makuwa]7.7e-10493.33Show/hide
Query:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
        M+RSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
Subjt:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK

Query:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR
        WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNG GKSSL AVVASGSGE EDHKR
Subjt:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR

Query:  RIPFIDFLGM
        RIPFIDFLGM
Subjt:  RIPFIDFLGM

KAG6571346.1 Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia]3.9e-9283.11Show/hide
Query:  MIRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLH
        M+RSRSSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLH
Subjt:  MIRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLH

Query:  GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAPPVVLGNGGGKSSLPAVVASG
        GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNH NNNNNILRTRHSLLPFSK        TAVKWTPL A    VL +GGG S+  A V SG
Subjt:  GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAPPVVLGNGGGKSSLPAVVASG

Query:  SGEAEDHKRRIPFIDFLGM
        S E E+ KRR+PFIDFLGM
Subjt:  SGEAEDHKRRIPFIDFLGM

XP_004147366.1 transcription factor MYB52 [Cucumis sativus]2.0e-10493.33Show/hide
Query:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
        M+RS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
Subjt:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK

Query:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTT-AVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR
        WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHN NNN I   RHSLL FSKTT AVKWTPLTA  PV+LGNG GKSSLPAVVASGSGE EDHKR
Subjt:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTT-AVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR

Query:  RIPFIDFLGM
        RIPFIDFLGM
Subjt:  RIPFIDFLGM

XP_008460890.2 PREDICTED: transcriptional activator Myb [Cucumis melo]3.8e-10393.3Show/hide
Query:  IRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKW
        +RSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKW
Subjt:  IRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKW

Query:  ALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRR
        ALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNG GKSSL AVVASGSGE EDHKRR
Subjt:  ALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRR

Query:  IPFIDFLGM
        IPFIDFLGM
Subjt:  IPFIDFLGM

XP_038902736.1 transcription factor MYB52-like [Benincasa hispida]6.5e-10391.39Show/hide
Query:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
        M+RSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
Subjt:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK

Query:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRR
        WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTN+NN N   LR RHSLLPFSKTTA+KWTPLTA  PV+LGNG GKSSLP  VASGS E++D KRR
Subjt:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRR

Query:  IPFIDFLGM
        IPFIDFLGM
Subjt:  IPFIDFLGM

TrEMBL top hitse value%identityAlignment
A0A0A0LM98 Uncharacterized protein9.8e-10593.33Show/hide
Query:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
        M+RS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
Subjt:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK

Query:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTT-AVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR
        WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHN NNN I   RHSLL FSKTT AVKWTPLTA  PV+LGNG GKSSLPAVVASGSGE EDHKR
Subjt:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTT-AVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR

Query:  RIPFIDFLGM
        RIPFIDFLGM
Subjt:  RIPFIDFLGM

A0A1S3CEN7 transcriptional activator Myb1.8e-10393.3Show/hide
Query:  IRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKW
        +RSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKW
Subjt:  IRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKW

Query:  ALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRR
        ALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNG GKSSL AVVASGSGE EDHKRR
Subjt:  ALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRR

Query:  IPFIDFLGM
        IPFIDFLGM
Subjt:  IPFIDFLGM

A0A5D3BQW6 Transcriptional activator Myb3.7e-10493.33Show/hide
Query:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
        M+RSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK
Subjt:  MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNK

Query:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR
        WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNG GKSSL AVVASGSGE EDHKR
Subjt:  WALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKR

Query:  RIPFIDFLGM
        RIPFIDFLGM
Subjt:  RIPFIDFLGM

A0A6J1EVU5 transcription factor CSA-like4.7e-9182.19Show/hide
Query:  MIRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLH
        M+RSRSSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLH
Subjt:  MIRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLH

Query:  GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAPPVVLGNGGGKSSLPAVVASG
        GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNH  NNNNILRTRHSLLPFSK        TAVKWTPL A    VL +GGG  +  A V SG
Subjt:  GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAPPVVLGNGGGKSSLPAVVASG

Query:  SGEAEDHKRRIPFIDFLGM
        S E E+ KRR+PFIDFLGM
Subjt:  SGEAEDHKRRIPFIDFLGM

A0A6J1I2H4 transcription factor CSA-like1.8e-9081.74Show/hide
Query:  MIRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLH
        M+RSRSSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQ GPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLH
Subjt:  MIRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLH

Query:  GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAPPVVLGNGGGKSSLPAVVASG
        GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNH  NNNNILRTRHSLLPFSK        TA+KWTPL A    VL +GGG  +  A VA G
Subjt:  GNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAPPVVLGNGGGKSSLPAVVASG

Query:  SGEAEDHKRRIPFIDFLGM
        S E ED KRR+PFIDFLGM
Subjt:  SGEAEDHKRRIPFIDFLGM

SwissProt top hitse value%identityAlignment
Q5NBM8 Transcription factor CSA2.7e-4364.62Show/hide
Query:  GGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDN
        G GGG  G  C RGHWRPAED KL+ LV Q+GPQNWN IAE  +GRSGKSCRLRW+NQLDP IN+  F+EEEEERL+   + +GNKWALIAR F GRTDN
Subjt:  GGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDN

Query:  AVKNHYHVIMARRRRERFTIFTNHNNNNNN
        AVKNH+HV+MARR RE+   F     ++++
Subjt:  AVKNHYHVIMARRRRERFTIFTNHNNNNNN

Q6R053 Transcription factor MYB566.6e-4270.43Show/hide
Query:  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNA
        G SG++   C RGHWRP ED KL++LV QFGPQNWN I+ H  GRSGKSCRLRW+NQLDP INK  F+EEEE RLL   + +GNKWALI+R F GRTDNA
Subjt:  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNA

Query:  VKNHYHVIMARRRRE
        VKNH+HVIMARR RE
Subjt:  VKNHYHVIMARRRRE

Q6R0C4 Transcription factor MYB529.9e-4676.64Show/hide
Query:  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM
        C RGHWRPAED KLR+LVEQFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPF+EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIM
Subjt:  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM

Query:  ARRRRER
        ARR RER
Subjt:  ARRRRER

Q9FX36 Transcription factor MYB541.6e-4372.22Show/hide
Query:  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV
        + C RGHWRPAED KL+ LVEQ+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF+EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HV
Subjt:  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV

Query:  IMARRRRE
        IMARR R+
Subjt:  IMARRRRE

Q9SEZ4 Transcription factor MYB1051.1e-4169.3Show/hide
Query:  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
        G SS  S  RGHWRPAED KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLDP IN+  F+EEEEERL+   +L+GNKWA+IAR F GRTDN+VK
Subjt:  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK

Query:  NHYHVIMARRRRER
        NH+HVIMAR+ RE+
Subjt:  NHYHVIMARRRRER

Arabidopsis top hitse value%identityAlignment
AT1G17950.1 myb domain protein 527.0e-4776.64Show/hide
Query:  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM
        C RGHWRPAED KLR+LVEQFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPF+EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIM
Subjt:  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM

Query:  ARRRRER
        ARR RER
Subjt:  ARRRRER

AT1G69560.1 myb domain protein 1058.0e-4369.3Show/hide
Query:  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
        G SS  S  RGHWRPAED KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLDP IN+  F+EEEEERL+   +L+GNKWA+IAR F GRTDN+VK
Subjt:  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK

Query:  NHYHVIMARRRRER
        NH+HVIMAR+ RE+
Subjt:  NHYHVIMARRRRER

AT1G73410.1 myb domain protein 541.1e-4472.22Show/hide
Query:  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV
        + C RGHWRPAED KL+ LVEQ+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF+EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HV
Subjt:  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV

Query:  IMARRRRE
        IMARR R+
Subjt:  IMARRRRE

AT4G33450.1 myb domain protein 691.8e-4762.68Show/hide
Query:  SCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVI
        SC RGHWRP ED+ LRQLVEQ+GP+NWN+IA+H  GRSGKSCRLRWYNQLDPNI K PF+EEEEERLL   ++ GN+WA IAR F GRTDNAVKNH+HVI
Subjt:  SCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVI

Query:  MARRRRERF--TIFTNHNNNNNNILRTRHSLLPFSKTTAVKW
        MARR+RE F  T  +  N   + +L    SL   +++    W
Subjt:  MARRRRERF--TIFTNHNNNNNNILRTRHSLLPFSKTTAVKW

AT5G17800.1 myb domain protein 564.7e-4370.43Show/hide
Query:  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNA
        G SG++   C RGHWRP ED KL++LV QFGPQNWN I+ H  GRSGKSCRLRW+NQLDP INK  F+EEEE RLL   + +GNKWALI+R F GRTDNA
Subjt:  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNA

Query:  VKNHYHVIMARRRRE
        VKNH+HVIMARR RE
Subjt:  VKNHYHVIMARRRRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGGTCAAGAAGTAGCAGTAGTAGTGGCGGCAGTAGCGGCGGTGGTGGCGGAAGCAGCGGCGTCAGCTGCTACCGAGGCCACTGGCGGCCGGCGGAGGACAATAA
ACTCCGGCAGCTCGTTGAACAATTTGGCCCTCAAAACTGGAATTACATTGCAGAACACTTTGAAGGCAGATCTGGAAAAAGCTGTAGATTGAGATGGTACAATCAACTAG
ATCCAAATATAAACAAGAACCCATTTAGTGAGGAAGAAGAAGAGAGGCTTTTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCTAGACACTTCAAAGGA
AGAACAGACAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAATCACAACAACAATAATAACAACATTCTAAG
GACCCGCCATAGCTTACTACCCTTTTCAAAGACCACGGCCGTCAAATGGACTCCTCTTACGGCCGCTCCGCCCGTGGTGCTCGGAAATGGCGGCGGAAAGTCGTCTTTGC
CAGCTGTAGTTGCGTCAGGCTCCGGTGAGGCTGAGGATCACAAGAGGAGGATTCCATTCATAGACTTTCTTGGAATGAACTTGAAGGCAACGAGACCAAACACGTCCTAA
mRNA sequenceShow/hide mRNA sequence
TACTATCACAAAGCCAGCCCATTTACCTAATTAGATCACAAAATGCCTTATAATGGGATCTGTTCTATGTTCTTATACAAAACAAATGAAGCCTTGAAGAACCAAAATAA
ATGAAATAAAGCTGTTTTGTTGGTGTTTTTTCAAATCTCAATGCAATTCTCAAATCCCATTTCACAATCTTTTCTTCTTCAATAATAAACTTTCTTTTAACCTCTCTTTC
CTTCTAAGGGTTTTTAGGGTTGGATTTTCAGAATGATAAGGTCAAGAAGTAGCAGTAGTAGTGGCGGCAGTAGCGGCGGTGGTGGCGGAAGCAGCGGCGTCAGCTGCTAC
CGAGGCCACTGGCGGCCGGCGGAGGACAATAAACTCCGGCAGCTCGTTGAACAATTTGGCCCTCAAAACTGGAATTACATTGCAGAACACTTTGAAGGCAGATCTGGAAA
AAGCTGTAGATTGAGATGGTACAATCAACTAGATCCAAATATAAACAAGAACCCATTTAGTGAGGAAGAAGAAGAGAGGCTTTTAATGTTTCAACAGCTTCATGGGAACA
AATGGGCATTAATAGCTAGACACTTCAAAGGAAGAACAGACAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACT
AATCACAACAACAATAATAACAACATTCTAAGGACCCGCCATAGCTTACTACCCTTTTCAAAGACCACGGCCGTCAAATGGACTCCTCTTACGGCCGCTCCGCCCGTGGT
GCTCGGAAATGGCGGCGGAAAGTCGTCTTTGCCAGCTGTAGTTGCGTCAGGCTCCGGTGAGGCTGAGGATCACAAGAGGAGGATTCCATTCATAGACTTTCTTGGAATGA
ACTTGAAGGCAACGAGACCAAACACGTCCTAAGTGGTCTCTAAGCAACTAATCTAGTCCACCTGAAAGGGAGATAGGGCTCCAAGAGCAAATCTACTAAGGGGTTTCCAA
AGTTTGGATGTGGTGGAAAAAGAGACTTTCTCCCACATGCTTTACACGCATGTCTATTATTATTTTCTTCAACCTGATTTTGGATGATATATAGGTGGATTTGTCTTATT
TTCATTGACAAAAATACTTAAATGC
Protein sequenceShow/hide protein sequence
MIRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKG
RTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTTAVKWTPLTAAPPVVLGNGGGKSSLPAVVASGSGEAEDHKRRIPFIDFLGMNLKATRPNTS