; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G017800 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G017800
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRibosome assembly factor mrt4
Genome locationCicolChr02:629230..639232
RNA-Seq ExpressionCcUC02G017800
SyntenyCcUC02G017800
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0000027 - ribosomal large subunit assembly (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0009536 - plastid (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0016740 - transferase activity (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR005880 - Ribosomal protein L2, bacterial/organellar-type
IPR043164 - 50S ribosomal protein L10, insertion domain superfamily
IPR043141 - Ribosomal protein L10-like domain superfamily
IPR040637 - 60S ribosomal protein L10P, insertion domain
IPR033867 - Ribosome assembly factor Mrt4
IPR022671 - Ribosomal protein L2, conserved site
IPR022669 - Ribosomal protein L2, C-terminal
IPR014726 - Ribosomal protein L2, domain 3
IPR014722 - Ribosomal protein L2, domain 2
IPR008991 - Translation protein SH3-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147352.1 uncharacterized protein LOC101215226 [Cucumis sativus]2.4e-9173.9Show/hide
Query:  MRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINS
        MRSA A ALRGLRRFSSRRPVSSPINQ       VS                                       P  G  GRTFRERMTNYMATLDINS
Subjt:  MRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINS

Query:  QIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVR
        QIGSCMPL  MRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSR CLVKLPSREEKLID++C+ATIGQVSNP HGT+KLRKAGQSRWLGRRP VR
Subjt:  QIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVR

Query:  GVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        GVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPWGKPTKCGYKTRS +RK+
Subjt:  GVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

XP_008460907.1 PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo]7.1e-9172.73Show/hide
Query:  MRSAPAFALRGLRRFSSRRPVSSPI---NQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLD
        MRSA A ALRGLRRFSSRRPVSSPI    ++PTSDLLVS  +                                          GRTFRERM NYMATLD
Subjt:  MRSAPAFALRGLRRFSSRRPVSSPI---NQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLD

Query:  INSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRP
        INSQIGSCMPL AMRIGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGKSR CLVKLPSREEK ID++C+ATIGQVSNP HG +KLRKAGQSRWLGRRP
Subjt:  INSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRP

Query:  VVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ
         VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPWGKPTKCGYKTRS +RK+Q
Subjt:  VVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ

XP_022932015.1 uncharacterized protein LOC111438344 [Cucurbita moschata]2.5e-8871.71Show/hide
Query:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI
        MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                                       GTYGRT RERMTNYMATLDI
Subjt:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI

Query:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
        NSQIGSCMPLSAMRIGTIIHNIE+NPGQGGKLVR+AGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
Subjt:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV

Query:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        VRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWGKPTKCGYKT  L+RKK
Subjt:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

XP_022971723.1 uncharacterized protein LOC111470392 [Cucurbita maxima]1.1e-8872.11Show/hide
Query:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI
        MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                                       GTYGRTFRERMTNYMATLDI
Subjt:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI

Query:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
        NSQIGSCMPLSAMRIGTIIHNI +NPGQGGKLVRSAGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
Subjt:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV

Query:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        VRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWGKPTKCGYKT  L+RKK
Subjt:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

XP_038902173.1 60S ribosomal protein L2, mitochondrial [Benincasa hispida]1.2e-10180.08Show/hide
Query:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI
        MAMRSAPA ALRGLRRFSSRRPVSSPI +EPTSDLLVS  +                                       GTYGRTFRERMTNYMATLDI
Subjt:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI

Query:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
        NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGT ARILKLPE KSRYCLVKLPSREEKLID+RC+ATIGQVSNPSHGT+KLRKAGQSRWLGRRPV
Subjt:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV

Query:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
Subjt:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LQ76 Ribosomal_L2_C domain-containing protein5.3e-8491.23Show/hide
Query:  GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPS
        G  GRTFRERMTNYMATLDINSQIGSCMPL  MRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSR CLVKLPSREEKLID++C+ATIGQVSNP 
Subjt:  GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPS

Query:  HGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        HGT+KLRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPWGKPTKCGYKTRS +RK+
Subjt:  HGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

A0A1S3CEQ1 60S ribosomal protein L2, mitochondrial3.4e-9172.73Show/hide
Query:  MRSAPAFALRGLRRFSSRRPVSSPI---NQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLD
        MRSA A ALRGLRRFSSRRPVSSPI    ++PTSDLLVS  +                                          GRTFRERM NYMATLD
Subjt:  MRSAPAFALRGLRRFSSRRPVSSPI---NQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLD

Query:  INSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRP
        INSQIGSCMPL AMRIGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGKSR CLVKLPSREEK ID++C+ATIGQVSNP HG +KLRKAGQSRWLGRRP
Subjt:  INSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRP

Query:  VVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ
         VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPWGKPTKCGYKTRS +RK+Q
Subjt:  VVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ

A0A6J1DZS5 uncharacterized protein LOC1110250175.7e-8670.2Show/hide
Query:  MAMRSAPAFALRGLRRFSSRRPVS----SPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMA
        MAMRSA + ALRGLRRFSS+  +S    + INQEP+SDLLVS  +                                       GTYGRTFRERMTNYMA
Subjt:  MAMRSAPAFALRGLRRFSSRRPVS----SPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMA

Query:  TLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLG
        TLDINSQIGSCMPLSAMRIGT+IHNIE+NPGQGGKLVR+AGT A+ILK P   SRYCLV+LPS  EKLIDSRC+ATIGQVSNPSHGT+KLRKAGQSRWLG
Subjt:  TLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLG

Query:  RRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        RRPVVRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWGKPTK GYKT  L+RKK
Subjt:  RRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

A0A6J1F113 uncharacterized protein LOC1114383441.2e-8871.71Show/hide
Query:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI
        MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                                       GTYGRT RERMTNYMATLDI
Subjt:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI

Query:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
        NSQIGSCMPLSAMRIGTIIHNIE+NPGQGGKLVR+AGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
Subjt:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV

Query:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        VRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWGKPTKCGYKT  L+RKK
Subjt:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

A0A6J1I7S9 uncharacterized protein LOC1114703925.5e-8972.11Show/hide
Query:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI
        MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                                       GTYGRTFRERMTNYMATLDI
Subjt:  MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDI

Query:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
        NSQIGSCMPLSAMRIGTIIHNI +NPGQGGKLVRSAGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQVSNPSHGTRKLRKAGQSRWLGRRPV
Subjt:  NSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV

Query:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        VRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWGKPTKCGYKT  L+RKK
Subjt:  VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

SwissProt top hitse value%identityAlignment
A4FV84 mRNA turnover protein 4 homolog4.5e-4055.17Show/hide
Query:  RLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNAGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLN
        R+FFG NKVM V+LGRS SDE +  L++VSK L G  GL FTN  KEEV+  F +Y + DYAR G+ AT  V L  GPLEQF H MEP LR+LGLP  L 
Subjt:  RLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNAGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLN

Query:  KGVVELVSDFVVCEEGKSLSPESAGILRSLGIRMATFRLNLVCRW
        KGVV L+SD+ VC+EG  L+PE A +L+  G  MA F++++   W
Subjt:  KGVVELVSDFVVCEEGKSLSPESAGILRSLGIRMATFRLNLVCRW

P0C8K6 60S ribosomal protein L2, mitochondrial1.2e-4865.07Show/hide
Query:  LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGR
        LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+LPS  EKLIDSRC+ATIG VSNP+HG RKLRKAGQSRW GR
Subjt:  LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGR

Query:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYK
        RP+VRGVAMNPVDHPHGGGEG++K     G+ S +PWGKPTK G++
Subjt:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYK

P26859 60S ribosomal protein L2, mitochondrial4.7e-4562.59Show/hide
Query:  IGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRG
        +G+C+PL+ + IGT +HNIE NPGQG KL R+AGT A+I++  E   + C+V+LPS  +KLIDSRC+ATIG VSN +HG RK  KAGQSRWLGRRP+VRG
Subjt:  IGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRG

Query:  VAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRK
        VAMNPVDHPHGGGEG++K     G+ S +PWGKPTK G+KT   +R+
Subjt:  VAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRK

P92812 60S ribosomal protein L2, mitochondrial1.2e-4865.07Show/hide
Query:  LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGR
        LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+LPS  EKLIDSRC+ATIG VSNP+HG RKLRKAGQSRW GR
Subjt:  LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGR

Query:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYK
        RP+VRGVAMNPVDHPHGGGEG++K     G+ S +PWGKPTK G++
Subjt:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYK

Q2F969 60S ribosomal protein L2, mitochondrial1.2e-4865.07Show/hide
Query:  LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGR
        LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+LPS  EKLIDSRC+ATIG VSNP+HG RKLRKAGQSRW GR
Subjt:  LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGR

Query:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYK
        RP+VRGVAMNPVDHPHGGGEG++K     G+ S +PWGKPTK G++
Subjt:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYK

Arabidopsis top hitse value%identityAlignment
AT1G25260.1 Ribosomal protein L10 family protein5.7e-6273.2Show/hide
Query:  RLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNAGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLN
        + F G+NKVMQV+LGRSA DE+R G+YKVSKLL G+ GL  T++PKEEVE LFN Y D D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLN
Subjt:  RLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNAGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLN

Query:  KGVVELVSDFVVCEEGKSLSPESAGILRSLGIRMATFRLNLVCRWSPGDFELY
        KG VELV+DFVVCEEGK LSP+SA ILR L ++MATF+LNL+CRWSP DFELY
Subjt:  KGVVELVSDFVVCEEGKSLSPESAGILRSLGIRMATFRLNLVCRWSPGDFELY

AT2G44065.1 Ribosomal protein L2 family3.8e-5866.28Show/hide
Query:  TYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLP-EGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPS
        T  ++   +M   M  +DINS IGS MPL  MRIGTIIHNIE+NPGQG K+VR+AGT+A+ILK P +GK   CL+KLPS + K I+++C+ATIG VSNPS
Subjt:  TYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLP-EGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPS

Query:  HGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ
        HGT+KL KAGQSRWLG RP VRGVAMNP DHPHGGGEGKSKSSGS G+ S +PWGKP K GYK+ S+++KK+
Subjt:  HGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ

AT2G44065.2 Ribosomal protein L2 family3.8e-5866.28Show/hide
Query:  TYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLP-EGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPS
        T  ++   +M   M  +DINS IGS MPL  MRIGTIIHNIE+NPGQG K+VR+AGT+A+ILK P +GK   CL+KLPS + K I+++C+ATIG VSNPS
Subjt:  TYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLP-EGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPS

Query:  HGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ
        HGT+KL KAGQSRWLG RP VRGVAMNP DHPHGGGEGKSKSSGS G+ S +PWGKP K GYK+ S+++KK+
Subjt:  HGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ

ATCG00830.1 ribosomal protein L28.8e-3149.67Show/hide
Query:  DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRR
        ++  ++G+ +PL+ M +GT IHNIEI  G+GG+L R+AG  A+++   EGKS    +KLPS E +LI   C AT+GQV N     + L +AG   WLG+R
Subjt:  DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRR

Query:  PVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        PVVRGV MNPVDHPHGGGEG++       K   TPWG P   G +TR  +RKK
Subjt:  PVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK

ATCG01310.1 ribosomal protein L28.8e-3149.67Show/hide
Query:  DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRR
        ++  ++G+ +PL+ M +GT IHNIEI  G+GG+L R+AG  A+++   EGKS    +KLPS E +LI   C AT+GQV N     + L +AG   WLG+R
Subjt:  DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRR

Query:  PVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK
        PVVRGV MNPVDHPHGGGEG++       K   TPWG P   G +TR  +RKK
Subjt:  PVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTGTCTCTTGGTCGAAGTGCTTCTGATGAGATTCGACCAGGCCTTTACAAGGTTTCCAAGCTTCTG
CACGGAAATGCTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCC
ACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAAGGTGTG
GTGGAGCTTGTGTCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGCATACTGCGTTCGTTGGGGATAAGGATGGCAACTTTTCGG
CTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGATGATTCTGACAGTTGTATACTTCCTCTTGGAGTAGCAGCAGCAGCC
GAAAGCCACAAAACCCTCTCCGGCCGTCGTATTTCTCTTTGCTTCCTTCCCAATCTTCGAGAATCCCAAGTACCTGGAATTATTCCCTTTCGCACTGCTGCAATC
GGAAGGGTCATGGCTATGAGATCCGCGCCCGCGTTTGCTCTTCGGGGCCTCAGAAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCAATCAGGAACCCACC
TCCGACCTTCTAGTTTCTGGCAAGTCCCTCTTCCCATTTTCCTTTATCTCATCTTCTTTTCTGCGCCTTTCTTTATCTTTTGATTTTGAGTTCAAATATTTTCTT
GTGGTTGGAATGTTTGTCTACTCTGTGTGTCCTGATCTAGGGACATACGGTAGGACGTTCCGTGAACGAATGACAAATTACATGGCTACCCTCGACATCAATTCA
CAAATTGGAAGCTGCATGCCGCTTTCTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAATCCAGGTCAAGGCGGGAAGCTTGTGCGGTCAGCAGGA
ACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATACTGCTTGGTGAAACTCCCTTCGCGTGAAGAGAAGTTGATTGATTCTAGGTGCAAAGCAACA
ATTGGTCAGGTGTCTAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCAATGAAC
CCAGTGGATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGCGGTTAC
AAGACTCGATCTCTCAGACGCAAAAAACAAGAATAA
mRNA sequenceShow/hide mRNA sequence
GTGTAGAAAACTCAAATAAGAACGTAAACCCTAAAACCCAAAGCTTCTTTTTTTCTGTATTTCCCTGCGGCAGACATACCCAAATTCGCGACCATATTTGATTTC
TTTCTTCTCCATTCTCCCTTCTCCCTCTCCATCGCTGCCATTATCGGTCGCTGGTTCATCTCCACACTCAATTTTCTTTCTCCTCCTCTTAACTCCCTCTCTATT
ACTGCAAAACTCCATCTCAAGGTCTGTATCAAGGTTTCTTTTTTTGCAGCAATAAAAGATGCCCAAGTCGAAGCGTGATAGGCCAGTTACTTTATCAAAAACCAA
GAAGAAAGGAAGGGAACACAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTACAACTCAATTTTTGTTTTCACTGTTGAGAACATGAGAAACCT
CAAGTTTAAGGAACTCAGGGAGCAGCTGAAGTCATCTAGCAGGCAAGTTGTATTTCCTGGCTTCTGTATTATTTATTTGCTACATCATTTCAAATATTGATTAGT
GATACGGTATTGTATTATGCCTCTGATGCCTGTTGACATTTTTAAAGTGTAAGAAATGTTTAATGAGGCTAAGTGGTAAAAAATCGGGGTGTTCTGTTTGTGAAC
CTCATTTACTGCAAATTTTTGAACTGCTGCTGAGTGGCATTTTGAGATGTCATGCTTTGAGGCTCCTAGTGAGGAATATATTGGGATAATTAGTATGATTAATAG
TAAGGGGCATTCTAGTAATTAATCATTAAATTGGTTAGGTTTTTCGGTTATAAATGGTGGGAAAAAGTATGGCTTGGGTGTGAAGAACTTTTGTAGGATTTCCTT
AGTTGGTAATTTGGGAGAGTCCAAGACTCTTGAAAGCTAGTGGTTACCTTGTTACTACTCTTATAAATTATAGTATATTTCCTTATATTTTCATATATTAGTGTT
CTTGAGTTTTCTATGTGTTTTTCTGTGTGTTCTGGTCAGGAGGTATCCTAACACATGCATGACCTCTCTATTTCTCTAATGATTTGATGTGACCTAACCTGACCA
GACTGAGTAGTTAACATGGGTTCCCAAATTGACTTTTTCCCCCAATGGATAGATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTGTCTCTTGGTCGAAGTGCTT
CTGATGAGATTCGACCAGGCCTTTACAAGGTTTCCAAGCTTCTGCACGGAAATGCTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTTATTTA
ACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTT
CTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAAGGTGTGGTGGAGCTTGTGTCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCAGAGTCAG
CCGGCATACTGCGTTCGTTGGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGATG
ATTCTGACAGTTGTATACTTCCTCTTGGAGTAGCAGCAGCAGCCGAAAGCCACAAAACCCTCTCCGGCCGTCGTATTTCTCTTTGCTTCCTTCCCAATCTTCGAG
AATCCCAAGTACCTGGAATTATTCCCTTTCGCACTGCTGCAATCGGAAGGGTCATGGCTATGAGATCCGCGCCCGCGTTTGCTCTTCGGGGCCTCAGAAGGTTCT
CTTCCAGAAGGCCAGTTTCATCTCCAATCAATCAGGAACCCACCTCCGACCTTCTAGTTTCTGGCAAGTCCCTCTTCCCATTTTCCTTTATCTCATCTTCTTTTC
TGCGCCTTTCTTTATCTTTTGATTTTGAGTTCAAATATTTTCTTGTGGTTGGAATGTTTGTCTACTCTGTGTGTCCTGATCTAGGGACATACGGTAGGACGTTCC
GTGAACGAATGACAAATTACATGGCTACCCTCGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTTCTGCAATGCGCATTGGTACGATTATCCACAATATCG
AGATAAATCCAGGTCAAGGCGGGAAGCTTGTGCGGTCAGCAGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATACTGCTTGGTGAAACTCC
CTTCGCGTGAAGAGAAGTTGATTGATTCTAGGTGCAAAGCAACAATTGGTCAGGTGTCTAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCC
GGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCAATGAACCCAGTGGATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAA
AGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGCGGTTACAAGACTCGATCTCTCAGACGCAAAAAACAAGAATAA
Protein sequenceShow/hide protein sequence
MDRLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNAGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGV
VELVSDFVVCEEGKSLSPESAGILRSLGIRMATFRLNLVCRWSPGDFELYIDGPDDSDSCILPLGVAAAAESHKTLSGRRISLCFLPNLRESQVPGIIPFRTAAI
GRVMAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSLSFDFEFKYFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINS
QIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMN
PVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQE