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CcUC02G019040 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G019040
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionVascular-related unknown protein 1
Genome locationCicolChr02:1756249..1757056
RNA-Seq ExpressionCcUC02G019040
SyntenyCcUC02G019040
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455422.1 PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]1.2e-6275Show/hide
Query:  NNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNKKTR
        NNA  +  D P ENSS   AAGAEEQEESGWTDYLEDYFNSE +ERESSFLCSSIGSCSNWD  +NIS PNYDIN N NVG V +D       +  KKTR
Subjt:  NNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNKKTR

Query:  AQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN
         QKIFE DDSLQDTATSPIHSPKV D K+ TS ENPRF+D HIT+  NSTGSGRQ+GKYYSNKEK VYSAEKKGLCL P SMLLNYHN
Subjt:  AQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN

XP_011658705.1 vascular-related unknown protein 1 [Cucumis sativus]1.5e-5770.16Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNK
        ME N+ A    D     +SS+V    EEQEESGWTDYLEDYFNSE +ERESSFLCSSIGSCSNWD  +NIS P+YDIN N N+G V +D       +  K
Subjt:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNK

Query:  KTRAQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN
        KTR QKIFE DDSLQDTATSPIHSPKV D K+ TS EN  F+D HIT+  NSTGSGRQ+GKYYSNKEKGVYSAEKKGLCLFP SMLLNYHN
Subjt:  KTRAQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN

XP_022136166.1 uncharacterized protein LOC111007924 [Momordica charantia]5.2e-3452.08Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVA---AGAEEQEESGWTDYLEDYF-NSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTNVGKVIFDVP------NKK
        MEKN  A     PP E  S++ A    G  E+EESGWTDYLEDYF +S+IERE SFLCSSIGSCS+ D N +         +VG+V  D P       K 
Subjt:  MEKNNAAAEGVDPPTENSSSSVA---AGAEEQEESGWTDYLEDYF-NSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTNVGKVIFDVP------NKK

Query:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSA-----EKKGLCLFPLSMLLNY
        TR QKIF+DDSL+DTATSP+HSPKV D K+ T H N +F+DH   M+  S GS       YS  EKGV +A     +++GLCLFP SMLL+Y
Subjt:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSA-----EKKGLCLFPLSMLLNY

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]2.6e-2560.77Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFL-CSSIGSCSNWDHNISDPNYDINN-----TNVGKVIFDVPN----KK
        M+K NAAA GVDPP E SSS+ A GAEE  ESGWT+YLEDY  SEIER+SSFL CSS GSCS WD  IS+ N +  N      +VG+VI D PN    KK
Subjt:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFL-CSSIGSCSNWDHNISDPNYDINN-----TNVGKVIFDVPN----KK

Query:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKL
        T  Q+IF+DDSL+DTATSP+ +PKV D  +
Subjt:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKL

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]2.2e-6977.13Show/hide
Query:  MEKNNAAAEGVDPPTENSSSS----VAAGAEEQEESGWTDYLEDYFNSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTN-VGKVIFDVPN----KKT
        MEKNNA AEG D P ENSS+S     AAGAEEQEESGWTDYLEDYF+S    ESS+LCSSIGSCSNWDHNIS+PNYDIN TN +GK+IFDVPN    KKT
Subjt:  MEKNNAAAEGVDPPTENSSSS----VAAGAEEQEESGWTDYLEDYFNSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTN-VGKVIFDVPN----KKT

Query:  RAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN
        R QKIFEDDSLQDTATSPIHSPKV D K+ TSHENPRF+     ++TN TGS RQLGKYYS+KE GVYS+EKKGLCLFPLSMLLNYHN
Subjt:  RAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein7.3e-5870.16Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNK
        ME N+ A    D     +SS+V    EEQEESGWTDYLEDYFNSE +ERESSFLCSSIGSCSNWD  +NIS P+YDIN N N+G V +D       +  K
Subjt:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNK

Query:  KTRAQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN
        KTR QKIFE DDSLQDTATSPIHSPKV D K+ TS EN  F+D HIT+  NSTGSGRQ+GKYYSNKEKGVYSAEKKGLCLFP SMLLNYHN
Subjt:  KTRAQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN

A0A1S3C0F7 uncharacterized protein LOC1034955855.8e-6375Show/hide
Query:  NNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNKKTR
        NNA  +  D P ENSS   AAGAEEQEESGWTDYLEDYFNSE +ERESSFLCSSIGSCSNWD  +NIS PNYDIN N NVG V +D       +  KKTR
Subjt:  NNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSE-IERESSFLCSSIGSCSNWD--HNISDPNYDIN-NTNVGKVIFD-------VPNKKTR

Query:  AQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN
         QKIFE DDSLQDTATSPIHSPKV D K+ TS ENPRF+D HIT+  NSTGSGRQ+GKYYSNKEK VYSAEKKGLCL P SMLLNYHN
Subjt:  AQKIFE-DDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN

A0A6J1C2S1 uncharacterized protein LOC1110079242.5e-3452.08Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVA---AGAEEQEESGWTDYLEDYF-NSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTNVGKVIFDVP------NKK
        MEKN  A     PP E  S++ A    G  E+EESGWTDYLEDYF +S+IERE SFLCSSIGSCS+ D N +         +VG+V  D P       K 
Subjt:  MEKNNAAAEGVDPPTENSSSSVA---AGAEEQEESGWTDYLEDYF-NSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTNVGKVIFDVP------NKK

Query:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSA-----EKKGLCLFPLSMLLNY
        TR QKIF+DDSL+DTATSP+HSPKV D K+ T H N +F+DH   M+  S GS       YS  EKGV +A     +++GLCLFP SMLL+Y
Subjt:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSA-----EKKGLCLFPLSMLLNY

A0A6J1ESI7 Uncharacterized protein1.3e-2560.77Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFL-CSSIGSCSNWDHNISDPNYDINN-----TNVGKVIFDVPN----KK
        M+K NAAA GVDPP E SSS+ A GAEE  ESGWT+YLEDY  SEIER+SSFL CSS GSCS WD  IS+ N +  N      +VG+VI D PN    KK
Subjt:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFL-CSSIGSCSNWDHNISDPNYDINN-----TNVGKVIFDVPN----KK

Query:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKL
        T  Q+IF+DDSL+DTATSP+ +PKV D  +
Subjt:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKL

A0A6J1JN61 Uncharacterized protein1.8e-2460.77Show/hide
Query:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFL-CSSIGSCSNWDHNISDPNYDINNT-----NVGKVIFDVPN----KK
        M+K NA   GVDPP E SSS+ A GAEE EESGWT+YLEDY  SEIER+SSFL CSS GSCS WD  IS+ N +  N      +VG+VI D PN    KK
Subjt:  MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFL-CSSIGSCSNWDHNISDPNYDINNT-----NVGKVIFDVPN----KK

Query:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKL
        T  Q IF+DDSL+DTATSP+ +PKV DF +
Subjt:  TRAQKIFEDDSLQDTATSPIHSPKVGDFKL

SwissProt top hitse value%identityAlignment
Q9LSZ3 Vascular-related unknown protein 11.9e-0728.23Show/hide
Query:  EKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNS-----------EIERESSFLCSSIGSCSN-WDHNISDPNYDINNTNVGKVIFDVPNK
        E+N+   + +D    +  S    G + QEESGWT YL+D+ N            + +   S L +S    S+   H  S  ++ +N     K+ F     
Subjt:  EKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNS-----------EIERESSFLCSSIGSCSN-WDHNISDPNYDINNTNVGKVIFDVPNK

Query:  KTRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHIT---MVTNSTGSG-----------------RQLGKYYSNKEKGVYSAEKKGLCLF
        + R +KI EDDSL+DTA+SP++SPKV  F+       PR  + +++   ++ N  G G                 R L    +N          +GLC+ 
Subjt:  KTRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHIT---MVTNSTGSG-----------------RQLGKYYSNKEKGVYSAEKKGLCLF

Query:  PLSMLLNYH
        P+SML N++
Subjt:  PLSMLLNYH

Arabidopsis top hitse value%identityAlignment
AT3G21710.1 unknown protein1.3e-0633.08Show/hide
Query:  EKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNS-----------EIERESSFLCSSIGSCSN-WDHNISDPNYDINNTNVGKVIFDVPNK
        E+N+   + +D    +  S    G + QEESGWT YL+D+ N            + +   S L +S    S+   H  S  ++ +N     K+ F     
Subjt:  EKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNS-----------EIERESSFLCSSIGSCSN-WDHNISDPNYDINNTNVGKVIFDVPNK

Query:  KTRAQKIFEDDSLQDTATSPIHSPKVGDFK
        + R +KI EDDSL+DTA+SP++SPKV  F+
Subjt:  KTRAQKIFEDDSLQDTATSPIHSPKVGDFK

AT3G21710.2 unknown protein1.4e-0828.23Show/hide
Query:  EKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNS-----------EIERESSFLCSSIGSCSN-WDHNISDPNYDINNTNVGKVIFDVPNK
        E+N+   + +D    +  S    G + QEESGWT YL+D+ N            + +   S L +S    S+   H  S  ++ +N     K+ F     
Subjt:  EKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNS-----------EIERESSFLCSSIGSCSN-WDHNISDPNYDINNTNVGKVIFDVPNK

Query:  KTRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHIT---MVTNSTGSG-----------------RQLGKYYSNKEKGVYSAEKKGLCLF
        + R +KI EDDSL+DTA+SP++SPKV  F+       PR  + +++   ++ N  G G                 R L    +N          +GLC+ 
Subjt:  KTRAQKIFEDDSLQDTATSPIHSPKVGDFKLGTSHENPRFEDHHIT---MVTNSTGSG-----------------RQLGKYYSNKEKGVYSAEKKGLCLF

Query:  PLSMLLNYH
        P+SML N++
Subjt:  PLSMLLNYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAACAACGCCGCCGCTGAAGGTGTTGATCCCCCGACGGAAAATTCCTCCTCCTCCGTGGCCGCTGGAGCCGAAGAGCAAGAAGAGAGTGGTTGGACTGATTA
CTTGGAGGATTATTTCAATTCAGAAATTGAGAGAGAAAGCAGTTTTTTGTGTTCAAGTATTGGGAGTTGTTCAAATTGGGATCATAATATTTCAGATCCCAATTATGATA
TTAATAATACCAATGTTGGGAAAGTGATATTTGATGTCCCAAACAAGAAAACAAGAGCTCAGAAGATTTTTGAGGATGATTCCTTACAAGATACAGCTACTTCTCCTATT
CATAGTCCAAAAGTTGGTGATTTCAAACTGGGAACATCCCATGAAAATCCGAGGTTTGAGGATCATCATATCACAATGGTCACTAATTCTACGGGAAGTGGAAGGCAATT
GGGGAAATATTATTCAAACAAAGAAAAAGGTGTGTATTCAGCTGAGAAAAAAGGGTTGTGTTTGTTTCCTTTGTCCATGCTACTTAATTACCATAATTGA
mRNA sequenceShow/hide mRNA sequence
CTATTCTTTTCATGGAGAAGAACAACGCCGCCGCTGAAGGTGTTGATCCCCCGACGGAAAATTCCTCCTCCTCCGTGGCCGCTGGAGCCGAAGAGCAAGAAGAGAGTGGT
TGGACTGATTACTTGGAGGATTATTTCAATTCAGAAATTGAGAGAGAAAGCAGTTTTTTGTGTTCAAGTATTGGGAGTTGTTCAAATTGGGATCATAATATTTCAGATCC
CAATTATGATATTAATAATACCAATGTTGGGAAAGTGATATTTGATGTCCCAAACAAGAAAACAAGAGCTCAGAAGATTTTTGAGGATGATTCCTTACAAGATACAGCTA
CTTCTCCTATTCATAGTCCAAAAGTTGGTGATTTCAAACTGGGAACATCCCATGAAAATCCGAGGTTTGAGGATCATCATATCACAATGGTCACTAATTCTACGGGAAGT
GGAAGGCAATTGGGGAAATATTATTCAAACAAAGAAAAAGGTGTGTATTCAGCTGAGAAAAAAGGGTTGTGTTTGTTTCCTTTGTCCATGCTACTTAATTACCATAATTG
AGATGTAATTTAAGCATAATAATCATTAAAATCTCTA
Protein sequenceShow/hide protein sequence
MEKNNAAAEGVDPPTENSSSSVAAGAEEQEESGWTDYLEDYFNSEIERESSFLCSSIGSCSNWDHNISDPNYDINNTNVGKVIFDVPNKKTRAQKIFEDDSLQDTATSPI
HSPKVGDFKLGTSHENPRFEDHHITMVTNSTGSGRQLGKYYSNKEKGVYSAEKKGLCLFPLSMLLNYHN