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CcUC02G019670 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G019670
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCicolChr02:2381648..2383366
RNA-Seq ExpressionCcUC02G019670
SyntenyCcUC02G019670
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023554650.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]4.1e-3286.02Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME
        MASFAARAI RSS GKAATLLSVGARAAPARSPF +ASKRP S+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSR SYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME

XP_023554651.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]5.3e-3289.89Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEV
        MASFAARAI RSS GKAATLLSVGARAAPARSPF +ASKRP S+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSR SYGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEV

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]1.6e-3388.17Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMSFCVESMLPFHSATSSALM SMLSVSR +YGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME

XP_038887456.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]2.2e-3392.13Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEV
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMSFCVESMLPFHSATSSALM SMLSVSR +YGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEV

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]6.3e-3392.05Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMSFCVESMLPFHSATSSALM SMLSVSR +YGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE

TrEMBL top hitse value%identityAlignment
A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.3e-3184.95Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME
        MASFAARAIFRSSSGK ATLLS GARAAPARSPF +ASKRPFS  S RIP+EMSFCVESMLPFHSATSSALMTSMLSVS  SYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 62.2e-3189.77Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        MASFAARAIFRSSSGKAATLLS GARAAPARSPF +ASKRPFS  S RIP+EMSFCVESMLPFHSATSSALMTSMLSVS  SYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 62.2e-3189.77Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        MASFAARAIFRSSSGKAATLLS GARAAPARSPF +ASKRPFS  S RIP+EMSFCVESMLPFHSATSSALMTSMLSVS  SYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE

A0A6J1HZK6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X22.2e-3187.64Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEV
        MASFAARAI RSS G+AATLLSVG+RAAPARS F +ASKRPFS+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSR SYGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEV

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.7e-3183.87Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME
        MASFAARAI RSS G+AATLLSVG+RAAPARS F +ASKRPFS+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSR SYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPME

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial3.1e-1148.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.9e-1147.13Show/hide
Query:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWL
        AAR++FRS++ +A++     S G +  P  AR+ F +  + P +    R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSRR  GW+
Subjt:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWL

AT1G28395.2 unknown protein1.9e-1147.13Show/hide
Query:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWL
        AAR++FRS++ +A++     S G +  P  AR+ F +  + P +    R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSRR  GW+
Subjt:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWL

AT2G20585.1 nuclear fusion defective 62.2e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE

AT2G20585.2 nuclear fusion defective 62.2e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE

AT2G20585.3 nuclear fusion defective 62.2e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTGGCGTTGC
TTCTAAACGACCTTTCTCTAAGTGCTCTGTAAGGATTCCAGTTGAAATGAGCTTCTGCGTCGAGTCCATGCTTCCATTTCATTCTGCAACTTCTTCGGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCGTAGTTATGGTTGGCTTTCAGAAGTACAGCCGATGGAGGATGTAATATGTGTGATATACACAATTGACCCTATATTTTTGGCCCTTAGA
ATGAAAGATGAAAAGGAGGAGGATGAAATAGTGAAGGGAAGAAAGAAGCCCGAGGCCGAGTGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTT
TTCAAATTGTGGCGCACTCTCAGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAATTTGGCGAGCTGATCCGCTGGAATTTGGTTTTCC
ATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAG
mRNA sequenceShow/hide mRNA sequence
CGAATTTATAATTTAATTTTAAAAAAGAAAAATAAAAAATCCCCCGGTTTCTCTAGCAGCGGCGGCAGGGTTTAGCATATCAATGCCCTAAATCTAAGACGGAACTCCGT
TCGTTCATCGTGGCTGCATTCTCAGATTTGCCGATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAG
AGCAGCTCCGGCTCGTTCACCATTTGGCGTTGCTTCTAAACGACCTTTCTCTAAGTGCTCTGTAAGGATTCCAGTTGAAATGAGCTTCTGCGTCGAGTCCATGCTTCCAT
TTCATTCTGCAACTTCTTCGGCATTGATGACTTCGATGCTTTCTGTCTCTCGCCGTAGTTATGGTTGGCTTTCAGAAGTACAGCCGATGGAGGATGTAATATGTGTGATA
TACACAATTGACCCTATATTTTTGGCCCTTAGAATGAAAGATGAAAAGGAGGAGGATGAAATAGTGAAGGGAAGAAAGAAGCCCGAGGCCGAGTGCTTCCCTCTTGAGTT
AGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTCAAATTGTGGCGCACTCTCAGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAAT
TTGGCGAGCTGATCCGCTGGAATTTGGTTTTCCATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAG
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRRSYGWLSEVQPMEDVICVIYTIDPIFLALR
MKDEKEEDEIVKGRKKPEAECFPLELGVAWYSTGRGFSNCGALSGRKVLCAEFYIVTVAAAKFGELIRWNLVFHVLAFSLVCMS