; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G019860 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G019860
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationCicolChr02:2541557..2542195
RNA-Seq ExpressionCcUC02G019860
SyntenyCcUC02G019860
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045594.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.7e-5363.48Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE++NI+N  I+TGDDC+ VGD+NK+V I+DVTCG GH +SIGSLGKY+K+K+ +GV VK CKL +T+N VRIKTW + A AF   DMHF DIEMVN
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNP+IIDQE CPWNQCNRKV SK KISNVS K +         + + CSQ       S  CEGVEVADIDL YSGSE
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

KAA0059167.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.7e-5366.08Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSEE+ I++ KI+TGDDCV VGDSNK+VTIT+VTCG GH +SIGSLGKY K+KD +GV VK CK+ NT+N VRIKTW + A AF   DMHF DIEM N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS
        VSNPIIIDQE CPWNQCNRKV SK KISNVS K +        +   +  K SI CEGVEVADI+L YSG+
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS

XP_031744814.1 exopolygalacturonase-like [Cucumis sativus]4.0e-5567.06Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE++NI++ KISTGDDCV VGDSNK+VTIT+VTCG GH +S+GSLGKY K+KD +GV VK CKLINT+N VRIKTW + AGAF   DMHF DIEM N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSG
        VSNP+IIDQE CPWNQCNRKV SK KIS VS K +        +   +  K SI CEGVEVADI+L YSG
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSG

XP_031744817.1 exopolygalacturonase-like [Cucumis sativus]6.8e-5567.06Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE++NI++ KISTGDDCV VGDSNK+VTIT+VTCG GH +S+GSLGKY K+KD +GV VK CKLINT+N VRIKTW + AGAF   DMHF DIEM N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSG
        VSNP+IIDQE CPWNQCNRKV SK KIS VS K +        +   +  K SI CEGVEVADI+L YSG
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSG

XP_038895545.1 exopolygalacturonase-like [Benincasa hispida]3.4e-5465.7Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE +NI+N KI TGDDC+ VGDSNK++ I+DVTCG GH +SIGSLGKY+K++   GV VK CKLINTSN VRIKTW +  GAF   DMHF DIEMVN
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNPIIIDQE CPWNQCNRKV SK KIS VS K ++       +   +  K S+ CEGVEVADIDL YSGS+
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ0 Exopolygalacturonase-like8.1e-5463.48Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE++NI+N  I+TGDDC+ VGD+NK+V I+DVTCG GH +SIGSLGKY+K+K+ +GV VK CKL +T+N VRIKTW + A AF   DMHF DIEMVN
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNP+IIDQE CPWNQCNRKV SK KISNVS K +         + + CSQ       S  CEGVEVADIDL YSGSE
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

A0A5A7UTD3 Exopolygalacturonase-like8.1e-5466.08Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSEE+ I++ KI+TGDDCV VGDSNK+VTIT+VTCG GH +SIGSLGKY K+KD +GV VK CK+ NT+N VRIKTW + A AF   DMHF DIEM N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS
        VSNPIIIDQE CPWNQCNRKV SK KISNVS K +        +   +  K SI CEGVEVADI+L YSG+
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS

A0A5D3BWP4 Exopolygalacturonase-like8.1e-5463.48Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE++NI+N  I+TGDDC+ VGD+NK+V I+DVTCG GH +SIGSLGKY+K+K+ +GV VK CKL +T+N VRIKTW + A AF   DMHF DIEMVN
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNP+IIDQE CPWNQCNRKV SK KISNVS K +         + + CSQ       S  CEGVEVADIDL YSGSE
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

A0A5D3D708 Exopolygalacturonase-like8.1e-5466.08Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSEE+ I++ KI+TGDDCV VGDSNK+VTIT+VTCG GH +SIGSLGKY K+KD +GV VK CK+ NT+N VRIKTW + A AF   DMHF DIEM N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS
        VSNPIIIDQE CPWNQCNRKV SK KISNVS K +        +   +  K SI CEGVEVADI+L YSG+
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS

A0A5D3DYI3 Exopolygalacturonase-like8.1e-5463.48Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +SSSE++NI+N  I+TGDDC+ VGD+NK+V I+DVTCG GH +SIGSLGKY+K+K+ +GV VK CKL +T+N VRIKTW + A AF   DMHF DIEMVN
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNP+IIDQE CPWNQCNRKV SK KISNVS K +         + + CSQ       S  CEGVEVADIDL YSGSE
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLE------ALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)7.4e-3644.91Show/hide
Query:  SEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSN
        S+ VNI+N +I TGDDC+ +GD +K + IT++TCG GH +S+GSLG+Y  ++  +G+ VK C +  + N VRIKTW +      + +MHF DI M +V  
Subjt:  SEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSN

Query:  PIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSG
        PI+IDQ  CP+NQC  +V S  K+S +S K ++     + +   +  K S  C GVE+ADIDL YSG
Subjt:  PIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSG

Q05967 Polygalacturonase2.5e-3645.93Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +S S  VNI +   STGDDC+ VGD  +++ IT VTCG GH +S+GSLG    +K  +GV V+ C   NT N VRIKTW          D+HF DI + N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNP++IDQ  CP+N+CN+ + S+ KIS VS + ++     + + + L+ K  + CEG+EV DID+ YSG E
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

Q39766 Polygalacturonase9.6e-3645.09Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTW-SEFAGAFTTFDMHFGDIEMV
        M  SE VNI+   I TGDDC+ +GD  K + I ++TCG GH +SIGSLGK+  ++   G+ +  C + NTSN  RIKTW  E  GA +  ++HF DI M 
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTW-SEFAGAFTTFDMHFGDIEMV

Query:  NVSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        NVS+PI+IDQ+ CPWN+C +   SK K+SN+S K +     L  +   +    S  C+ VE+ADID+ ++G+E
Subjt:  NVSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

Q39786 Polygalacturonase9.6e-3645.09Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTW-SEFAGAFTTFDMHFGDIEMV
        M  SE VNI+   I TGDDC+ +GD  K + I ++TCG GH +SIGSLGK+  ++   G+ +  C + NTSN  RIKTW  E  GA +  ++HF DI M 
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTW-SEFAGAFTTFDMHFGDIEMV

Query:  NVSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        NVS+PI+IDQ+ CPWN+C +   SK K+SN+S K +     L  +   +    S  C+ VE+ADID+ ++G+E
Subjt:  NVSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

Q40312 Polygalacturonase1.2e-3844.63Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        M  S +V I+N  I TGDDCV +GD +K++T+  V CG GH +S+GSLGK+  +++  G+ VK C L  T N VRIKTW +  G  T  D+HF DI M N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEAL------LLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS
        V NP+IIDQE  PWNQC++K  SK K+S +S K ++        ++L CS        ++ C+GVE+ ++DL ++G+
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEAL------LLLRCSQTCLQQKYSITCEGVEVADIDLIYSGS

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein1.8e-3744.77Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +  S+ V I+N  ISTGDDC+ VGD  K + +  VTCG GH +S+GSLG+Y  ++D  G+ V  C L  T N +RIKTW   A + T  D+HF DI + +
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNPI+IDQE CPWNQCN++ +S  K+ N+S K +      + +   L  K    C+ VE+ DID+ Y+G++
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

AT3G07830.1 Pectin lyase-like superfamily protein9.9e-3643.6Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +  S  V+I+N +ISTGDDCV VGD    + + +V CG GH +S+GSLG+Y  ++D  G+ V  C L  T N +RIKTW   A + T  ++HF +I + N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNPI+IDQE CPWNQCN++ SS  K++N+S + +      + +   L  K    CE V+V DI++ Y+G++
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

AT3G07840.1 Pectin lyase-like superfamily protein1.7e-3543.6Show/hide
Query:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN
        +  SE V I+N KI+TGDDC+ VGD  K + + +V CG GH +S+GSLG+Y  ++D  G+ V  C L  T N +RIKTW   A A T   +HF +I + N
Subjt:  MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVN

Query:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        VSNPI+IDQE CPWNQCN++  S  K+ ++S K +      + +   L  K +  C  VE+ +I+L Y G++
Subjt:  VSNPIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

AT3G14040.1 Pectin lyase-like superfamily protein9.6e-3139.64Show/hide
Query:  SEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSN
        S  VN++  KI TGDDCV +GD  + + + +V CG GH +SIGSLG+Y  ++   GV V+ C + NT N VRIKTW        + ++ F DI M NVS 
Subjt:  SEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSN

Query:  PIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        P++IDQE CP+  C   V SK K+S+V++K ++     + +   +  K  + C  + ++DI+L+++G E
Subjt:  PIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE

AT5G48140.1 Pectin lyase-like superfamily protein4.4e-3644.38Show/hide
Query:  SEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSN
        S+ + I+N  ISTGDDCV VGD  K + +  VTCG GH +SIGSLG+Y+ +++  G+ +  C L  T N +RIKTW   A   T  D+HF +I + NVSN
Subjt:  SEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGH-VSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSN

Query:  PIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE
        PI+IDQE CPWNQCN++  S  K++N+S K +      + +   L  K    C+ VEV D+++ Y+G++
Subjt:  PIIIDQEPCPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTTCAGAAGAGGTTAACATTATGAACAGAAAAATCTCAACGGGAGATGATTGTGTGTTTGTTGGAGACAGCAACAAGAAAGTAACTATTACTGATGTAACTTG
CGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTATGCCAAGCAAAAAGACAAGATAGGAGTTGTGGTCAAAACATGCAAATTAATCAATACTTCAAACAGTGTTA
GGATCAAAACATGGTCTGAATTTGCTGGCGCATTCACAACCTTTGACATGCATTTTGGAGATATTGAAATGGTTAACGTCAGTAATCCTATTATTATAGATCAAGAACCT
TGTCCATGGAATCAATGCAACCGAAAGGTTTCATCAAAAACTAAGATCAGCAACGTGAGTTTAAAAACATTAGAGGCACTTTTGCTACTCCGTTGCAGTCAAACTTGTTT
GCAGCAAAAATATAGCATAACATGTGAAGGTGTAGAAGTTGCTGATATTGACCTCATTTATAGTGGGAGTGAATCCCACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTTCAGAAGAGGTTAACATTATGAACAGAAAAATCTCAACGGGAGATGATTGTGTGTTTGTTGGAGACAGCAACAAGAAAGTAACTATTACTGATGTAACTTG
CGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTATGCCAAGCAAAAAGACAAGATAGGAGTTGTGGTCAAAACATGCAAATTAATCAATACTTCAAACAGTGTTA
GGATCAAAACATGGTCTGAATTTGCTGGCGCATTCACAACCTTTGACATGCATTTTGGAGATATTGAAATGGTTAACGTCAGTAATCCTATTATTATAGATCAAGAACCT
TGTCCATGGAATCAATGCAACCGAAAGGTTTCATCAAAAACTAAGATCAGCAACGTGAGTTTAAAAACATTAGAGGCACTTTTGCTACTCCGTTGCAGTCAAACTTGTTT
GCAGCAAAAATATAGCATAACATGTGAAGGTGTAGAAGTTGCTGATATTGACCTCATTTATAGTGGGAGTGAATCCCACAATTGA
Protein sequenceShow/hide protein sequence
MSSSEEVNIMNRKISTGDDCVFVGDSNKKVTITDVTCGLGHVSIGSLGKYAKQKDKIGVVVKTCKLINTSNSVRIKTWSEFAGAFTTFDMHFGDIEMVNVSNPIIIDQEP
CPWNQCNRKVSSKTKISNVSLKTLEALLLLRCSQTCLQQKYSITCEGVEVADIDLIYSGSESHN