CuGenDBv2

Gene ID	CcUC02G020680
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RING-type E3 ubiquitin transferase
Genome location	CicolChr02:3247760..3251336
RNA-Seq Expression	CcUC02G020680
Synteny	CcUC02G020680
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

8.6e-92

93.58

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

1.3e-92

94.65

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Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

XP_008447828.1 PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]

8.1e-90

93.58

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGR   LQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

XP_016900442.1 PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]

8.1e-90

93.58

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

XP_022928123.1 uncharacterized protein At5g43822 isoform X1 [Cucurbita moschata]

2.0e-88

86.29

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Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+ NASSIIGRL++LQDP N+GSLSGMDGIVDALL KQMESLQL FSSI KTMEELGN+VRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEEAASFTSPLYL
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL LLC+MHRSEY+LKES+VSALPELFWK RNH AQDLSSLQQLLVDQPNIRKEE       +YL
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEEAASFTSPLYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

4.2e-92

93.58

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

6.4e-93

94.65

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

A0A1S3BIY0 uncharacterized protein At5g43822 isoform X3

3.9e-90

93.58

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGR   LQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

3.9e-90

93.58

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+QNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARNH AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

A0A6J1EQT0 uncharacterized protein At5g43822 isoform X1

9.6e-89

86.29

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWD+LQVRLISQ+ NASSIIGRL++LQDP N+GSLSGMDGIVDALL KQMESLQL FSSI KTMEELGN+VRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEEAASFTSPLYL
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL LLC+MHRSEY+LKES+VSALPELFWK RNH AQDLSSLQQLLVDQPNIRKEE       +YL
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEEAASFTSPLYL

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

9.7e-38

45.99

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S ++NASSII RL+ +Q+  ++G+L  + GI DA++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        G QL +  S++   +++++R+G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K       DL++LQ L+VDQPNI K+E
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

6.9e-39

45.99

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S ++NASSII RL+ +Q+  ++G+L  + GI DA++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE
        G QL +  S++   +++++R+G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K       DL++LQ L+VDQPNI K+E
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGCCATGGTCAAAAAATATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTACCAAAATGCTTC
CTCTATCATCGGGAGGCTTGAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGC
AACTTAGTTTCTCGTCTATTAAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCCAAT
CAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCT
TAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGAATCATAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTC
GGAAAGAGGAAGCTGCCAGTTTTACTTCTCCGTTATATCTGTCTGTGATGGCCTTTGGCCCTTTACCAGATTTGACGTCTCCTCTTAATTTATACTGA

mRNA sequence

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Protein sequence

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MEAMVKKYQQRFRKFKDEMDRWDDLQVRLISQYQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSN
QPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNHRAQDLSSLQQLLVDQPNIRKEEAASFTSPLYLSVMAFGPLPDLTSPLNLY

CcUC02G020680 (gene) of Watermelon (PI 537277) v1 genome