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CcUC02G021090 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021090
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationCicolChr02:3582938..3586618
RNA-Seq ExpressionCcUC02G021090
SyntenyCcUC02G021090
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR033966 - RuBisCO
IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACB29085.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Lycoseris crocata]3.1e-1781.48Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNE+IREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
AER11594.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Tacca integrifolia]2.4e-1783.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNEIIREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
AIJ03446.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Lycoseris triplinervia]3.1e-1781.48Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNE+IREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
ASR73535.1 ribulose-1,5-bisphosphate carboxygenase/oxygenase large subunit, partial [Dioscorea spicata]2.4e-1783.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNEIIREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
YP_009862972.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Anthoceros punctatus]2.4e-1775.86Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
        WGN P AVANRVALEACVQARNEGR+LACEGN+IIREA+KWSPEL A CE++ E   +
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
TrEMBL top hitse value%identityAlignment
A0A2H4K9S6 Ribulose bisphosphate carboxylase large chain (Fragment)1.1e-1783.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNEIIREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
A0A6M8B0W8 Ribulose bisphosphate carboxylase large chain1.1e-1775.86Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
        WGN P AVANRVALEACVQARNEGR+LACEGN+IIREA+KWSPEL A CE++ E   +
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
A0A6M8B1K3 Ribulose bisphosphate carboxylase large chain1.1e-1775.86Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
        WGN P AVANRVALEACVQARNEGR+LACEGN+IIREA+KWSPEL A CE++ E   +
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
B2Y4V7 Ribulose bisphosphate carboxylase large chain (Fragment)1.5e-1781.48Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNE+IREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
G9JKI6 Ribulose bisphosphate carboxylase large chain (Fragment)1.1e-1783.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LACEGNEIIREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
SwissProt top hitse value%identityAlignment
P28446 Ribulose bisphosphate carboxylase large chain (Fragment)2.0e-1983.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGRNLA EGNEIIREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
P30827 Ribulose bisphosphate carboxylase large chain2.0e-1975Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLISF
        WGN P AVANRVALEACVQARNEGR+LA +GNEIIREA+KWSPEL A CE++ E    SF
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLISF
P36478 Ribulose bisphosphate carboxylase large chain (Fragment)2.6e-1983.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LA EGNEIIREA+KWSPEL A CEI+ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
P36481 Ribulose bisphosphate carboxylase large chain (Fragment)2.6e-1977.59Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
        WGN P AVANRVALEACVQARNEGR+LA EGNEIIREA+KWSPEL A CE++ E   I
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLI
Q7YJW4 Ribulose bisphosphate carboxylase large chain2.0e-1983.33Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGRNLA EGNEIIREA+KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases9.2e-2081.48Show/hide
Query:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE
        WGN P AVANRVALEACVQARNEGR+LA EGNEIIREA KWSPEL A CE++ E
Subjt:  WGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGTTATGGGGTAATGTACCTACTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAACGAGGGACGTAATCTTGCTTGTGAGGGTAATGA
AATTATCCGTGAGGCTAATAAATGGAGTCCCGAACTAGTTGCTACTTGTGAAATCTATTATGAAACAATGTTGATCTCTTTCTTTGAGCACATCGGCTATCATGCTGGAA
CTTCAAGCTATTGGGATGGGAAAGAAAGGCAAAGCTTCTTTGAGAATGCTTTTTCAGAGGGGAGGTCGAACATAAGGAATCCTTTTAGAAGCGCCACATCCAGCTCCCTG
TTTGTAAAGGGAAGGGACAACAGCAGCAACATATCCATTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATATTGTTATGGGGTAATGTACCTACTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAACGAGGGACGTAATCTTGCTTGTGAGGGTAATGA
AATTATCCGTGAGGCTAATAAATGGAGTCCCGAACTAGTTGCTACTTGTGAAATCTATTATGAAACAATGTTGATCTCTTTCTTTGAGCACATCGGCTATCATGCTGGAA
CTTCAAGCTATTGGGATGGGAAAGAAAGGCAAAGCTTCTTTGAGAATGCTTTTTCAGAGGGGAGGTCGAACATAAGGAATCCTTTTAGAAGCGCCACATCCAGCTCCCTG
TTTGTAAAGGGAAGGGACAACAGCAGCAACATATCCATTGGATAA
Protein sequenceShow/hide protein sequence
MILLWGNVPTAVANRVALEACVQARNEGRNLACEGNEIIREANKWSPELVATCEIYYETMLISFFEHIGYHAGTSSYWDGKERQSFFENAFSEGRSNIRNPFRSATSSSL
FVKGRDNSSNISIG