; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G021480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTrafficking protein particle complex subunit
Genome locationCicolChr02:3994390..3997021
RNA-Seq ExpressionCcUC02G021480
SyntenyCcUC02G021480
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR011012 - Longin-like domain superfamily
IPR044760 - Trafficking protein particle complex subunit 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589019.1 Transcription factor ABORTED MICROSPORES, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6983.43Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_004144858.1 trafficking protein particle complex subunit 2-like protein [Cucumis sativus]1.2e-6984.02Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRS   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_022136317.1 trafficking protein particle complex subunit 2-like protein [Momordica charantia]1.8e-6881.66Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRS   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA+
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_022928280.1 trafficking protein particle complex subunit 2-like protein [Cucurbita moschata]2.8e-6983.43Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

XP_031127945.1 trafficking protein particle complex subunit 2-like protein [Ipomoea triloba]4.4e-6780.95Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNP+KSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA
                               FFRRFH AYVDAVSNPFHVPGKKITS+TFAESVSTIVKSFG SSA
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA

TrEMBL top hitse value%identityAlignment
A0A0A0K4Q0 Uncharacterized protein6.0e-7084.02Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRS   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A1S3BJH9 trafficking protein particle complex subunit 2-like protein6.0e-7084.02Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRS   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A6J1C584 trafficking protein particle complex subunit 2-like protein8.7e-6981.66Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRS   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSA+
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A6J1ERA2 Trafficking protein particle complex subunit1.3e-6983.43Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

A0A6J1JPT4 Trafficking protein particle complex subunit1.3e-6983.43Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
                               FFRRFH AYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI

SwissProt top hitse value%identityAlignment
A6H7F7 Trafficking protein particle complex subunit 2-like protein4.6e-2740.74Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV
        M VCVAV+  +N PLYI+S    ++ LK H++VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++RS+
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV

Query:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV
                                  FR+ H++Y D + NPF+ PG +I S+ F   V++++
Subjt:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV

B2RYU6 Trafficking protein particle complex subunit 2-like protein1.2e-2740.74Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV
        M VC+AV+  +N PLYI+S T  ++ LK H++VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++RS+
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV

Query:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV
                                  FR+ H++Y D + NPF+ PG +I S+ F   V++++
Subjt:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV

Q54CU7 Trafficking protein particle complex subunit 2-like protein1.3e-2941.21Show/hide
Query:  IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDL-DVRDADVRS
        IVCVA+VG  NNPL+IQ F+ +   ++ LKLH+IVHCSLD+++++  + +K     ++ +LGLLYPTE+YKVYGYLTNTK+KFI+V  D  D++D+D++ 
Subjt:  IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDL-DVRDADVRS

Query:  VSTICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKS
                                  FF+R    +++  SNPF+ P  K+ SK F + V+ +V S
Subjt:  VSTICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKS

Q5M8X5 Trafficking protein particle complex subunit 2-like protein7.2e-2841.36Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV
        M VCVAV+  +N PLYI+S T  ++ LK H+ VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++RS+
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV

Query:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV
                                  FR+ H++Y D + NPF+ PG  I S+ F  +V++++
Subjt:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV

Q9JME7 Trafficking protein particle complex subunit 2-like protein1.6e-2740.74Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV
        M VC+AV+  +N PLYI+S T  +  LK H++VH SLDVVDE+++   K+     E +LGLLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++RS+
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRSV

Query:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV
                                  FR+ H++Y D + NPF+ PG +I S+ F   V++++
Subjt:  STICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIV

Arabidopsis top hitse value%identityAlignment
AT2G20930.1 SNARE-like superfamily protein8.3e-6472.89Show/hide
Query:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST
        MIVCVAVVGHQNNPLYIQSFT+ADDALKLHHIVHCSLDV++ERVNNP+KSG TLNE FLGLLYPT NYKVYGYLTNTKVKFI+VTTDLDVRD DVRS   
Subjt:  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVST

Query:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFS
                               FFR+FH AYVDAVSNPFHVPGKKITS+TFA++VS IV S+G +
Subjt:  ICGFPIFYSIIVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCCCTTTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTACACTGTTCGCT
GGATGTCGTCGATGAGCGGGTGAACAATCCGAGAAAATCTGGACCAACCCTGAACGAAACATTTCTGGGTCTTCTTTATCCGACCGAAAATTACAAAGTGTATGGCTATT
TGACTAACACCAAAGTGAAGTTCATTATGGTGACAACAGATCTAGATGTCAGAGATGCCGATGTGAGAAGTGTGAGTACCATTTGTGGGTTTCCAATTTTCTACAGCATT
ATAGTTCTTTCATTTTCACATGTGAACTATCACTGTAAATTTTTCAGGAGATTTCATGATGCATATGTGGATGCAGTTTCAAACCCATTTCATGTGCCAGGTAAGAAAAT
TACTTCCAAGACATTTGCAGAAAGTGTGAGCACCATTGTCAAGTCCTTTGGCTTCAGTTCAGCTATTTGA
mRNA sequenceShow/hide mRNA sequence
GATCCGACCTTCTTCGTGGTATCGCGACCAAAAAATTCGCATTGCCCGAGTTTTTTTTCGCAATCCAGCAAAATAATTCCGGCCAGCCATCGTCGAAGATGATCGTCTGC
GTCGCCGTCGTCGGCCACCAGAACAACCCCCTTTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTACACTGTTCGCTGGATGTCGTCGA
TGAGCGGGTGAACAATCCGAGAAAATCTGGACCAACCCTGAACGAAACATTTCTGGGTCTTCTTTATCCGACCGAAAATTACAAAGTGTATGGCTATTTGACTAACACCA
AAGTGAAGTTCATTATGGTGACAACAGATCTAGATGTCAGAGATGCCGATGTGAGAAGTGTGAGTACCATTTGTGGGTTTCCAATTTTCTACAGCATTATAGTTCTTTCA
TTTTCACATGTGAACTATCACTGTAAATTTTTCAGGAGATTTCATGATGCATATGTGGATGCAGTTTCAAACCCATTTCATGTGCCAGGTAAGAAAATTACTTCCAAGAC
ATTTGCAGAAAGTGTGAGCACCATTGTCAAGTCCTTTGGCTTCAGTTCAGCTATTTGAGTGACAAACCAGGCAACCATTGACGTGTAGAACTGAAAATTCAATACCGAGT
CTGAAGCCATTGACAGCCGTAGTTTACCTTACTGCTGTTGTCTACTGCCATTTTTCTTGTATTCTTGATAGTATTTGAAATTTCTTTTTCTCCAGTGTAGTAAGAAAGGT
GAAACAATTCAACTTTCTTTTTTCATTGGCATTCACTGTTTCTATTTTATGCTCGTCTCACATGACAGACTGGTTTCTGTTTCAAAGTGAAAATTTATCCGTATGAAATG
CAAGATTGAAGGGTT
Protein sequenceShow/hide protein sequence
MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSVSTICGFPIFYSI
IVLSFSHVNYHCKFFRRFHDAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI