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CcUC02G021830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr02:4290471..4291819
RNA-Seq ExpressionCcUC02G021830
SyntenyCcUC02G021830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS87523.1 Os04g0104350 [Oryza sativa Japonica Group]1.5e-0447.06Show/hide
Query:  PSSDSFPSIMFWVSGINFWVAVWSSKSGRS-MPKTGFVPISIAPAPSPNSATPTK-----SYG-RFALEVTSR----TRLPGLFSAKSLATLRPATPPEQ
        PSS SF + +  VSG+    A   S S RS +  TG  P + APA SPNSA PT+     S G R  +E TS     TR PGLFSA+SLA      PP Q
Subjt:  PSSDSFPSIMFWVSGINFWVAVWSSKSGRS-MPKTGFVPISIAPAPSPNSATPTK-----SYG-RFALEVTSR----TRLPGLFSAKSLATLRPATPPEQ

Query:  PM
        PM
Subjt:  PM

BAT10049.1 Os10g0168000 [Oryza sativa Japonica Group]8.5e-0540.38Show/hide
Query:  IVKLIPSSDSFPSIMFWVSGINFWVAVWSSKSGRSMPKTGFVPISIAPAPSPNSATPT-------KSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPE
        +V  +PS+ S P IM          A   S +G S  + G  P  IAPAPSPNS  PT       + + R + E  +RTR P LFSA SLA+     PPE
Subjt:  IVKLIPSSDSFPSIMFWVSGINFWVAVWSSKSGRSMPKTGFVPISIAPAPSPNSATPT-------KSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPE

Query:  QPMK
        QP +
Subjt:  QPMK

KAB8112197.1 hypothetical protein EE612_050279 [Oryza sativa]1.9e-0439.42Show/hide
Query:  IVKLIPSSDSFPSIMFWVSGINFWVAVWSSKSGRSMPKTGFVPISIAPAPSPNSATPT-------KSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPE
        +V  +PS+ S P IM          A   S +G S  + G  P  IAPAPSPNS  PT       + + + + E  +RTR P LFSA SLA+     PPE
Subjt:  IVKLIPSSDSFPSIMFWVSGINFWVAVWSSKSGRSMPKTGFVPISIAPAPSPNSATPT-------KSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPE

Query:  QPMK
        QP +
Subjt:  QPMK

KAG7011747.1 hypothetical protein SDJN02_26653, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-06100Show/hide
Query:  EVTSRTRLPGLFSAKSLATLRPATPPEQPMK
        EVTSRTRLPGLFSAKSLATLRPATPPEQPMK
Subjt:  EVTSRTRLPGLFSAKSLATLRPATPPEQPMK

TrEMBL top hitse value%identityAlignment
A0A0P0W5V7 Os04g0104350 protein7.0e-0547.06Show/hide
Query:  PSSDSFPSIMFWVSGINFWVAVWSSKSGRS-MPKTGFVPISIAPAPSPNSATPTK-----SYG-RFALEVTSR----TRLPGLFSAKSLATLRPATPPEQ
        PSS SF + +  VSG+    A   S S RS +  TG  P + APA SPNSA PT+     S G R  +E TS     TR PGLFSA+SLA      PP Q
Subjt:  PSSDSFPSIMFWVSGINFWVAVWSSKSGRS-MPKTGFVPISIAPAPSPNSATPTK-----SYG-RFALEVTSR----TRLPGLFSAKSLATLRPATPPEQ

Query:  PM
        PM
Subjt:  PM

A0A0P0XRZ5 Os10g0168000 protein4.1e-0540.38Show/hide
Query:  IVKLIPSSDSFPSIMFWVSGINFWVAVWSSKSGRSMPKTGFVPISIAPAPSPNSATPT-------KSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPE
        +V  +PS+ S P IM          A   S +G S  + G  P  IAPAPSPNS  PT       + + R + E  +RTR P LFSA SLA+     PPE
Subjt:  IVKLIPSSDSFPSIMFWVSGINFWVAVWSSKSGRSMPKTGFVPISIAPAPSPNSATPT-------KSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPE

Query:  QPMK
        QP +
Subjt:  QPMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAGAAGAAGAAGAAACCCGACGGCAAGATTCCTCGCCAGAATCCCTTCAAACGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAATTTCCCCACCAC
CCATCTTCATTTTCAAGCTTTCTTCCACCATGTACTCCAGTACGTACACAATCGAATTACTGCTCGCATTTCCATAGTCCATCAGAGCTCGCCGGCTCGCCGTCAGCTTC
TCAGTTCTCTTGCTATTGTGAAACTAATACCTTCCTCCGACAGTTTTCCATCGATTATGTTCTGGGTATCCGGAATAAATTTCTGGGTTGCTGTGTGGAGCTCAAAGAGT
GGCCGTTCAATGCCCAAAACAGGTTTTGTGCCAATTAGCATCGCCCCTGCACCATCCCCAAATAGTGCCACGCCTACCAAATCGTATGGACGATTTGCACTCGAAGTGAC
AAGCAGGACTCGGCTTCCTGGGTTGTTTTCAGCTAAGTCTTTGGCGACTCTAAGGCCTGCTACACCTCCAGAGCAACCCATGAAGTAA
mRNA sequenceShow/hide mRNA sequence
AAGAAGAAGAAGAAGAAACCCGACGGCAAGATTCCTCGCCAGAATCCCTTCAAACGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAATTTCCCCACCAC
CCATCTTCATTTTCAAGCTTTCTTCCACCATGTACTCCAGTACGTACACAATCGAATTACTGCTCGCATTTCCATAGTCCATCAGAGCTCGCCGGCTCGCCGTCAGCTTC
TCAGTTCTCTTGCTATTGTGAAACTAATACCTTCCTCCGACAGTTTTCCATCGATTATGTTCTGGGTATCCGGAATAAATTTCTGGGTTGCTGTGTGGAGCTCAAAGAGT
GGCCGTTCAATGCCCAAAACAGGTTTTGTGCCAATTAGCATCGCCCCTGCACCATCCCCAAATAGTGCCACGCCTACCAAATCGTATGGACGATTTGCACTCGAAGTGAC
AAGCAGGACTCGGCTTCCTGGGTTGTTTTCAGCTAAGTCTTTGGCGACTCTAAGGCCTGCTACACCTCCAGAGCAACCCATGAAGTAA
Protein sequenceShow/hide protein sequence
KKKKKKPDGKIPRQNPFKRNPRSKRQNQSPFLNFPTTHLHFQAFFHHVLQYVHNRITARISIVHQSSPARRQLLSSLAIVKLIPSSDSFPSIMFWVSGINFWVAVWSSKS
GRSMPKTGFVPISIAPAPSPNSATPTKSYGRFALEVTSRTRLPGLFSAKSLATLRPATPPEQPMK