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CcUC02G021910 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021910
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCicolChr02:4331869..4332138
RNA-Seq ExpressionCcUC02G021910
SyntenyCcUC02G021910
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]2.7e-3185.14Show/hide
Query:  QRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ
        +R S+VPKGYCAVYVGENQKKRFVIP+TYLNQPCFQDL +Q TEEFEYYHPMGGLTFHC DDIFA++I HLNEQ
Subjt:  QRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]8.1e-2872.41Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        M L +LLRR S +  +  +VVPKGYCAVYVGE QKKRFVIPVTYLNQPCFQDL SQA +EF YYHPMGGLT  CR+DIF N+I  LN
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

KGN43209.1 hypothetical protein Csa_020258 [Cucumis sativus]5.2e-2770.11Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        M + +LLRR+S +  +  +VVPKGYCAVYVGE QKKRFVIP+TYLNQPCFQ L SQA EEF YYHPMGGLT  CR+DIF N+I  LN
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]2.6e-2672.41Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        M + +LLRR+S  G    +VVPKGYCAVYVGE QKKRFVIPVTYLNQPCFQ L SQA EEF YYHPMGGLT  CR+DIF N+I  LN
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]2.1e-2871.59Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE
        MGLR+LL+R     NQ  S VPKGYCAVYVGE+QKKRFVIP++YLNQPCFQ+L  QA EEF YYHPMGGLT HCRDDIF ++I  LN+
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE

TrEMBL top hitse value%identityAlignment
A0A0A0K2F9 Uncharacterized protein2.5e-2770.11Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        M + +LLRR+S +  +  +VVPKGYCAVYVGE QKKRFVIP+TYLNQPCFQ L SQA EEF YYHPMGGLT  CR+DIF N+I  LN
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

A0A0A0K5V1 Uncharacterized protein9.9e-4087.64Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ
        MGLRRLLRRSSM GNQR S+VPKGYCAVYVGENQKKRFVIP+TYLNQPCFQDL +Q TEEFEYYHPMGGLTFHC DDIFA++I HLNEQ
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ

A0A1S4DWU0 auxin-induced protein 15A-like1.3e-2672.41Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        M + +LLRR+S  G    +VVPKGYCAVYVGE QKKRFVIPVTYLNQPCFQ L SQA EEF YYHPMGGLT  CR+DIF N+I  LN
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

A0A5D3CL76 Auxin-induced protein 15A-like1.3e-2672.41Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        M + +LLRR+S  G    +VVPKGYCAVYVGE QKKRFVIPVTYLNQPCFQ L SQA EEF YYHPMGGLT  CR+DIF N+I  LN
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.0e-2871.59Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE
        MGLR+LL+R     NQ  S VPKGYCAVYVGE+QKKRFVIP++YLNQPCFQ+L  QA EEF YYHPMGGLT HCRDDIF ++I  LN+
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG73.2e-1956.98Show/hide
Query:  LRRSSMTGNQRGSVV---PKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ
        +R++    N+  S V   PKGY AVYVGEN  KRFVIPV++LNQP FQDL SQA EEF Y HPMGGLT  C +D+F ++   L+ Q
Subjt:  LRRSSMTGNQRGSVV---PKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ

P33079 Auxin-induced protein 10A51.1e-1954.84Show/hide
Query:  MGLR--RLLRRSSMTGNQRGSV---VPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE
        MG R   ++RR+S    Q  S    VPKGY AVYVG+ + +RF IPV+YLN+P FQ+L SQA EEF Y HPMGGLT  C+++ F N+  HLNE
Subjt:  MGLR--RLLRRSSMTGNQRGSV---VPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE

P33080 Auxin-induced protein X10A6.5e-2055.29Show/hide
Query:  LRRSSMTGNQRGS---VVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE
        +R++S+  NQ  S    VPKGY  VYVG+ + +RF+IPV+YLNQP FQDL +QA EEF Y HPMGGLT  C++D F  +  HLN+
Subjt:  LRRSSMTGNQRGS---VVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNE

P33083 Auxin-induced protein 6B5.5e-1955.95Show/hide
Query:  LRRSSMTGNQRGSV---VPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        +R++S + NQ  S    V KGY AVYVGE + +RFVIPV+YLN+P FQDL SQA EEF Y+HP GGLT  C +D+F ++   LN
Subjt:  LRRSSMTGNQRGSV---VPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

Q9FK62 Auxin-responsive protein SAUR241.4e-1954.65Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL
        +G +++L RS  TG   GS  PKG+ AVYVGE+QKKR+++PV+YLNQP FQ L S++ EEF + HPMGGLT  C +D F N+   L
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family1.5e-1949.43Show/hide
Query:  RRLLRRSSMTGNQRGSV---VPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN
        +++LR++ +  +   S    VPKGY AVYVGE   KRFV+PV+YL+QP FQDL  +A EEF + HPMGGLT  C ++IF ++    N
Subjt:  RRLLRRSSMTGNQRGSV---VPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLN

AT5G18010.1 SAUR-like auxin-responsive protein family3.9e-2050Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL
        +G +++L RS+      GS  PKG+ AVYVGE+QKKR+++P++YL+QP FQ L S++ EEF + HPMGGLT  C +D F N+   L
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL

AT5G18020.1 SAUR-like auxin-responsive protein family6.6e-2051.22Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANM
        +G +++L RS+       S  PKG+ AVYVGE+QKKR+++P++YLNQP FQ L S++ EEF + HPMGGLT  C +D F N+
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANM

AT5G18050.1 SAUR-like auxin-responsive protein family1.9e-1948.84Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL
        +G +++L RS+       S  PKG+ AVYVGE+QKKR+++P++YLNQP FQ L S++ +EF + HPMGGLT  C +D F N+   L
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL

AT5G18080.1 SAUR-like auxin-responsive protein family1.0e-2054.65Show/hide
Query:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL
        +G +++L RS  TG   GS  PKG+ AVYVGE+QKKR+++PV+YLNQP FQ L S++ EEF + HPMGGLT  C +D F N+   L
Subjt:  MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTCGTCGTCTTCTAAGGCGGTCTTCAATGACAGGAAACCAGAGAGGTTCCGTGGTTCCTAAGGGTTATTGTGCAGTCTATGTTGGAGAGAACCAAAAG
AAACGGTTCGTGATTCCGGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGTTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTA
ACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCCCTCACTTGAATGAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTCGTCGTCTTCTAAGGCGGTCTTCAATGACAGGAAACCAGAGAGGTTCCGTGGTTCCTAAGGGTTATTGTGCAGTCTATGTTGGAGAGAACCAAAAG
AAACGGTTCGTGATTCCGGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGTTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTA
ACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCCCTCACTTGAATGAACAATGA
Protein sequenceShow/hide protein sequence
MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ