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CcUC02G021920 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021920
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCicolChr02:4334987..4335232
RNA-Seq ExpressionCcUC02G021920
SyntenyCcUC02G021920
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]3.8e-3282.05Show/hide
Query:  HHLLRQSLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL
        H + R S+VPKGYCAVYVGENQKKRFVIP+TYLNQPC QDLL Q TEEF+YYHPMGGLTFHC DDIF DLIS LN+QL
Subjt:  HHLLRQSLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2680Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ
        ++VPKGYCAVYVGE QKKRFVIPVTYLNQPC QDLL QA +EF YYHPMGGLT  C++DIFT+LISQLN+
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]9.0e-2669.51Show/hide
Query:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        M L HLL++    S +PKGYCAVYVGE+QKKRF+IP++YLNQPC Q+LL Q  EEF Y+HPMGGLT HCKD IFT+LIS+LN
Subjt:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.5e-2580Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ
        ++VPKGYCAVYVGE QKKRFVIPVTYLNQPC Q LL QA EEF YYHPMGGLT  C++DIFT+LISQLN+
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]2.5e-2875.61Show/hide
Query:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        MGL  LL++    S VPKGYCAVYVGE+QKKRFVIP++YLNQPC Q+LL QA EEF YYHPMGGLT HC+DDIFTDLIS+LN
Subjt:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein1.4e-2773.17Show/hide
Query:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        M L HLL++    S VPKGYCAVYVGE+QKKRFVIP+TYLN+PC Q LL Q  EEF YYHPMGGLT HC+DDIFTDLIS +N
Subjt:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

A0A0A0K5U4 Uncharacterized protein4.4e-2669.51Show/hide
Query:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        M L HLL++    S +PKGYCAVYVGE+QKKRF+IP++YLNQPC Q+LL Q  EEF Y+HPMGGLT HCKD IFT+LIS+LN
Subjt:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

A0A0A0K5V1 Uncharacterized protein3.1e-3275.56Show/hide
Query:  MGLHHLLRQ---------SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL
        MGL  LLR+         S+VPKGYCAVYVGENQKKRFVIP+TYLNQPC QDLL Q TEEF+YYHPMGGLTFHC DDIF DLIS LN+QL
Subjt:  MGLHHLLRQ---------SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL

A0A5D3CL76 Auxin-induced protein 15A-like7.4e-2680Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ
        ++VPKGYCAVYVGE QKKRFVIPVTYLNQPC Q LL QA EEF YYHPMGGLT  C++DIFT+LISQLN+
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.2e-2875.61Show/hide
Query:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        MGL  LL++    S VPKGYCAVYVGE+QKKRFVIP++YLNQPC Q+LL QA EEF YYHPMGGLT HC+DDIFTDLIS+LN
Subjt:  MGLHHLLRQ----SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG75.0e-1966.18Show/hide
Query:  PKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQ
        PKGY AVYVGEN  KRFVIPV++LNQP  QDLL QA EEF Y HPMGGLT  C +D+F  + S L+ Q
Subjt:  PKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQ

P33080 Auxin-induced protein X10A3.2e-1864.18Show/hide
Query:  VPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        VPKGY  VYVG+ + +RF+IPV+YLNQP  QDLL QA EEF Y HPMGGLT  CK+D F  + S LN
Subjt:  VPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

P33081 Auxin-induced protein 15A5.0e-1959.74Show/hide
Query:  GLHHLLRQSLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        G+    + +  PKGY AVYVGE + KRFVIPV+YLNQP  QDLL QA EEF Y HPMGGLT  C +D+F  + S LN
Subjt:  GLHHLLRQSLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

P33083 Auxin-induced protein 6B1.2e-1762.69Show/hide
Query:  VPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        V KGY AVYVGE + +RFVIPV+YLN+P  QDLL QA EEF Y+HP GGLT  C +D+F  + S LN
Subjt:  VPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

Q9FK62 Auxin-responsive protein SAUR245.5e-1857.35Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQL
        S  PKG+ AVYVGE+QKKR+++PV+YLNQP  Q LL ++ EEF + HPMGGLT  C +D F ++ S+L
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.0e-1957.14Show/hide
Query:  LHHLLRQSLVPKGYCAVYVGE-NQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        L H      +PKG+ AVYVGE  QK+RFV+PVTYL+ PC Q LL +A EEF + HPMGGLT  C + IF DL S+L+
Subjt:  LHHLLRQSLVPKGYCAVYVGE-NQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

AT4G38840.1 SAUR-like auxin-responsive protein family7.1e-2164.18Show/hide
Query:  VPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        VPKGY AVYVGE   KRFV+PV+YL+QP  QDLL +A EEF + HPMGGLT  C ++IF DL S+ N
Subjt:  VPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

AT5G18020.1 SAUR-like auxin-responsive protein family8.7e-1952.86Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ
        S  PKG+ AVYVGE+QKKR+++P++YLNQP  Q LL ++ EEF + HPMGGLT  C +D F ++ S+  +
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQ

AT5G18060.1 SAUR-like auxin-responsive protein family1.1e-1855.07Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN
        S  PKG+ AVYVGE+QKKR+++P++YLNQP  Q LL ++ EEF + HPMGGLT  C +D F ++ S+L+
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLN

AT5G18080.1 SAUR-like auxin-responsive protein family3.9e-1957.35Show/hide
Query:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQL
        S  PKG+ AVYVGE+QKKR+++PV+YLNQP  Q LL ++ EEF + HPMGGLT  C +D F ++ S+L
Subjt:  SLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTCACCATCTTCTCCGGCAGTCTTTGGTTCCAAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAACGGTTCGTGATTCCAGTAACTTACTTGAA
TCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGAAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGA
TCTCTCAGTTAAATCAACAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTCACCATCTTCTCCGGCAGTCTTTGGTTCCAAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAACGGTTCGTGATTCCAGTAACTTACTTGAA
TCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGAAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGA
TCTCTCAGTTAAATCAACAACTATGA
Protein sequenceShow/hide protein sequence
MGLHHLLRQSLVPKGYCAVYVGENQKKRFVIPVTYLNQPCLQDLLGQATEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL