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CcUC02G021940 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021940
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationCicolChr02:4338323..4339719
RNA-Seq ExpressionCcUC02G021940
SyntenyCcUC02G021940
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.1e-0472.22Show/hide
Query:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISH
        +LLC+ EEEFGY H MGGL  TIHCRDDIF   ISH
Subjt:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISH
KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]7.1e-0467.57Show/hide
Query:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHF
        +LL + EE+FGY H MGGL  TIHCRDDIFT++IS F
Subjt:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHF
XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.1e-0474.29Show/hide
Query:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIIS
        +LLC+ EEEFGY H MGGL  TIHCRDDIFT++IS
Subjt:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIIS
TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein4.1e-0572.22Show/hide
Query:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISH
        +LLC+ EEEFGY H MGGL  TIHCRDDIFT++IS+
Subjt:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISH
A0A5A7U363 Auxin-induced protein 15A-like5.3e-0572.22Show/hide
Query:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISH
        +LLC+ EEEFGY H MGGL  TIHCRDDIF   ISH
Subjt:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISH
A0A6J1C4W2 auxin-responsive protein SAUR24-like5.3e-0574.29Show/hide
Query:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIIS
        +LLC+ EEEFGY H MGGL  TIHCRDDIFT++IS
Subjt:  KLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34810.1 SAUR-like auxin-responsive protein family2.6e-0450Show/hide
Query:  SAPKLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIIS
        S  + L R EEEFG+ H MGGLTI   CR+++F ++I+
Subjt:  SAPKLLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIIS
AT5G18010.1 SAUR-like auxin-responsive protein family5.8e-0451.35Show/hide
Query:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
        LL + EEEFG+ H MGGLTI   C +D F N+ S  +
Subjt:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
AT5G18020.1 SAUR-like auxin-responsive protein family9.0e-0554.05Show/hide
Query:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
        LL + EEEFG+ H MGGLTI   C +D F N+ S F+
Subjt:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
AT5G18030.1 SAUR-like auxin-responsive protein family4.5e-0451.35Show/hide
Query:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
        LL + EEEFG+ H MGGLTI   C +D F N+ S  +
Subjt:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
AT5G18080.1 SAUR-like auxin-responsive protein family4.5e-0451.35Show/hide
Query:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE
        LL + EEEFG+ H MGGLTI   C +D F N+ S  +
Subjt:  LLCRFEEEFGYQHAMGGLTITIHCRDDIFTNIISHFE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTAAGTCTACTGCTATGCCCCATCCAGTAGCTTCTGAGAAGGCCTCTTTATCATCATGTAATCAATCTTGTAGAATAGGAACATTAGAAATAACCAAAACCAT
TGATGGAAATGAAATTGTCACAACTTTACTAGAAATTGAAGAGGTTTCTTACTTCAAAAAGAAGACAATAATGTTTGTGTTAGTTTTCATCCTTCTGCCTTGTAACTCTT
TTTCTTGCCTTCCAGCTATAAATGGTAAACATATTATTGAATCTCAGGTAAAACAAAGTGCTCCCAAGTTGCTTTGTCGGTTTGAAGAAGAATTTGGTTACCAGCATGCT
ATGGGTGGTCTTACTATTACTATTCATTGCAGAGACGACATTTTCACCAATATCATATCCCATTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTAAGTCTACTGCTATGCCCCATCCAGTAGCTTCTGAGAAGGCCTCTTTATCATCATGTAATCAATCTTGTAGAATAGGAACATTAGAAATAACCAAAACCAT
TGATGGAAATGAAATTGTCACAACTTTACTAGAAATTGAAGAGGTTTCTTACTTCAAAAAGAAGACAATAATGTTTGTGTTAGTTTTCATCCTTCTGCCTTGTAACTCTT
TTTCTTGCCTTCCAGCTATAAATGGTAAACATATTATTGAATCTCAGGTAAAACAAAGTGCTCCCAAGTTGCTTTGTCGGTTTGAAGAAGAATTTGGTTACCAGCATGCT
ATGGGTGGTCTTACTATTACTATTCATTGCAGAGACGACATTTTCACCAATATCATATCCCATTTTGAATGA
Protein sequenceShow/hide protein sequence
MLLKSTAMPHPVASEKASLSSCNQSCRIGTLEITKTIDGNEIVTTLLEIEEVSYFKKKTIMFVLVFILLPCNSFSCLPAINGKHIIESQVKQSAPKLLCRFEEEFGYQHA
MGGLTITIHCRDDIFTNIISHFE