; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G021970 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G021970
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationCicolChr02:4369885..4370181
RNA-Seq ExpressionCcUC02G021970
SyntenyCcUC02G021970
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572087.1 hypothetical protein SDJN03_28815, partial [Cucurbita argyrosperma subsp. sororia]4.9e-4287.76Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQS RRSSSTGNG+S V VPKG+FTIYVGEVQKKRFVIPLSYLNQP+FQDLLS+AE+EFGYDHPMGGITIPCSE+LFLDLT+SLKDS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

XP_022952259.1 auxin-induced protein 15A-like [Cucurbita moschata]2.9e-4287.76Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQS RRSSSTGNG+S V VPKG+FT+YVGEVQKKRFVIPLSYLNQP+FQDLLS+AEEEFGYDHPMGGITIPCSE+LFLDLT+SLKDS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

XP_022969520.1 auxin-induced protein 15A-like isoform X2 [Cucurbita maxima]6.4e-4286.73Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQS R+SSSTGNG+S V VPKG+FT+YVGEVQKKRFVIPLSYLNQPTFQDLLS+AE+EFGYDHPMGGITIPCSE+LFLDLT+SLKDS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

XP_023553883.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]1.4e-4186.6Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKD
        MG RLPRIVH KQS RRSSSTGNG+S V VPKG+FT+YVGE QKKRF+IPLSYLNQPTFQDLLSRAE+EFGYDHPMGGITIPCSE+LFLDLT+SLKD
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKD

XP_023554217.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]1.9e-4184.69Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQS RRSSSTGNG+S V +PKG+FT+YVGEVQKKRFVIPLSYLNQP+FQDLLS++E+EFGYDHPMGGITIPCSE+LFLDLT+SLKDS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

TrEMBL top hitse value%identityAlignment
A0A6J1C5R3 auxin-induced protein 15A-like1.4e-3984Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGAS--AVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQSLRRSSSTGNGAS  AV VPKG+FT+YVGEVQKKRFVIPLSYLN+P+FQDLL +AEEEFGYDHPMGGITIPCSE+ FL LTQSL +S
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGAS--AVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

A0A6J1GK20 auxin-induced protein X15-like1.1e-3983.84Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSE-ELFLDLTQSLKDS
        MG RLPRIVH KQS RRSSSTGNG+S V +PKG+FT+YVGEVQKKRFVIPLSYLNQP+FQDLLS+AEEEFGYDHPMGGITIPCSE E  LDLT+SL DS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSE-ELFLDLTQSLKDS

A0A6J1GL62 auxin-induced protein 15A-like1.4e-4287.76Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQS RRSSSTGNG+S V VPKG+FT+YVGEVQKKRFVIPLSYLNQP+FQDLLS+AEEEFGYDHPMGGITIPCSE+LFLDLT+SLKDS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

A0A6J1I054 auxin-induced protein 15A-like isoform X23.1e-4286.73Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS
        MG RLPRIVH KQS R+SSSTGNG+S V VPKG+FT+YVGEVQKKRFVIPLSYLNQPTFQDLLS+AE+EFGYDHPMGGITIPCSE+LFLDLT+SLKDS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS

A0A6J1I2U7 auxin-induced protein 15A-like isoform X12.9e-4084.85Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELF-LDLTQSLKDS
        MG RLPRIVH KQS R+SSSTGNG+S V VPKG+FT+YVGEVQKKRFVIPLSYLNQPTFQDLLS+AE+EFGYDHPMGGITIPCSE+LF LDLT+SL DS
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELF-LDLTQSLKDS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.4e-2358.76Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGASA--VYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSL
        MG RLP        +R++ S  N AS+  +  PKG+  +YVGE   KRFVIP+S+LNQP FQDLLS+AEEEFGYDHPMGG+TIPCSE+LF  +T  L
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGASA--VYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSL

P33080 Auxin-induced protein X10A2.8e-2456.57Show/hide
Query:  MGSRLPRIVHVKQSLRRSSSTGNGAS--AVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKD
        MG RLP        +R++S   N AS  +V VPKG+  +YVG+ + +RF+IP+SYLNQP+FQDLL++AEEEFGYDHPMGG+TIPC E+ FL +T  L D
Subjt:  MGSRLPRIVHVKQSLRRSSSTGNGAS--AVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKD

Q9FJF7 Auxin-responsive protein SAUR223.1e-2353.93Show/hide
Query:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK
        ++  K+ L RS++  + A     PKGF  +YVGE QKKR+++PLSYLNQP+FQ LLS++E+EFG+DHPMGG+TIPC E+ F+++T  L+
Subjt:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK

Q9FJG0 Auxin-responsive protein SAUR203.1e-2355.29Show/hide
Query:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLT
        ++  K+ L RS++  + A     PKGF  +YVGE QKKR+++P+SYLNQP+FQ LLS++EEEFG+DHPMGG+TIPC E+ F+++T
Subjt:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLT

Q9FK62 Auxin-responsive protein SAUR242.8e-2462.03Show/hide
Query:  SSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK
        S STG G++A   PKGF  +YVGE QKKR+++P+SYLNQP+FQ LLS++EEEFG+DHPMGG+TIPC E+ F+++T  L+
Subjt:  SSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family1.2e-2758.51Show/hide
Query:  MGSRLPRIVH-VKQSLRRSS--STGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDL
        M  R+PR++   KQ LR++   S+ + +S++ VPKG+  +YVGE   KRFV+P+SYL+QP+FQDLL +AEEEFG+DHPMGG+TIPCSEE+F+DL
Subjt:  MGSRLPRIVH-VKQSLRRSS--STGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDL

AT5G18010.1 SAUR-like auxin-responsive protein family2.9e-2453.93Show/hide
Query:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK
        ++  K+ L RS++ G+ A     PKGF  +YVGE QKKR+++PLSYL+QP+FQ LLS++EEEFG+ HPMGG+TIPC E+ F+++T  L+
Subjt:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK

AT5G18020.1 SAUR-like auxin-responsive protein family2.2e-2455.29Show/hide
Query:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLT
        ++  K+ L RS++  + A     PKGF  +YVGE QKKR+++P+SYLNQP+FQ LLS++EEEFG+DHPMGG+TIPC E+ F+++T
Subjt:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLT

AT5G18050.1 SAUR-like auxin-responsive protein family2.2e-2453.93Show/hide
Query:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK
        ++  K+ L RS++  + A     PKGF  +YVGE QKKR+++PLSYLNQP+FQ LLS++E+EFG+DHPMGG+TIPC E+ F+++T  L+
Subjt:  IVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK

AT5G18080.1 SAUR-like auxin-responsive protein family2.0e-2562.03Show/hide
Query:  SSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK
        S STG G++A   PKGF  +YVGE QKKR+++P+SYLNQP+FQ LLS++EEEFG+DHPMGG+TIPC E+ F+++T  L+
Subjt:  SSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCCGGTTGCCTAGAATTGTTCATGTTAAGCAAAGTCTTCGTCGGTCTTCATCAACTGGAAATGGAGCATCGGCGGTTTACGTTCCAAAGGGGTTCTTTACCAT
TTATGTTGGTGAAGTACAAAAGAAGCGTTTCGTCATTCCACTGTCGTACTTGAACCAGCCTACTTTTCAAGATTTGTTGAGTCGAGCAGAAGAAGAATTTGGATATGATC
ACCCCATGGGCGGCATCACAATTCCTTGCAGTGAAGAACTTTTCCTTGATCTCACTCAAAGTTTGAAAGACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCCGGTTGCCTAGAATTGTTCATGTTAAGCAAAGTCTTCGTCGGTCTTCATCAACTGGAAATGGAGCATCGGCGGTTTACGTTCCAAAGGGGTTCTTTACCAT
TTATGTTGGTGAAGTACAAAAGAAGCGTTTCGTCATTCCACTGTCGTACTTGAACCAGCCTACTTTTCAAGATTTGTTGAGTCGAGCAGAAGAAGAATTTGGATATGATC
ACCCCATGGGCGGCATCACAATTCCTTGCAGTGAAGAACTTTTCCTTGATCTCACTCAAAGTTTGAAAGACTCATGA
Protein sequenceShow/hide protein sequence
MGSRLPRIVHVKQSLRRSSSTGNGASAVYVPKGFFTIYVGEVQKKRFVIPLSYLNQPTFQDLLSRAEEEFGYDHPMGGITIPCSEELFLDLTQSLKDS