; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G022060 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G022060
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionAuxin-responsive protein
Genome locationCicolChr02:4438922..4439426
RNA-Seq ExpressionCcUC02G022060
SyntenyCcUC02G022060
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049684.1 auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa]1.4e-4691.89Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  A DAP+DVPAGHVAICVGSS RRFVVRATYLNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

KAG6572078.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4690.99Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

XP_004144827.1 indole-3-acetic acid-induced protein ARG7 [Cucumis sativus]6.2e-4792.79Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR  AGDAPSDVPAGHVAICVGSS RRFVVRATYLNHPIFQ LL QAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

XP_023554734.1 auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]2.3e-4690.99Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

XP_038888410.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]1.9e-5197.3Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSG GDAPSDVPAGHVAICVGSS RRFVVRATYLNHPIFQ LLLQAEEEYGFTNQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

TrEMBL top hitse value%identityAlignment
A0A0A0K0H1 Uncharacterized protein3.0e-4792.79Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR  AGDAPSDVPAGHVAICVGSS RRFVVRATYLNHPIFQ LL QAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

A0A1S3BJN8 auxin-responsive protein SAUR36-like1.9e-4690.99Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  A DAP+DVPAGHVAICVGSS RRFVVRAT+LNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

A0A5D3CM24 Auxin-responsive protein SAUR36-like6.7e-4791.89Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  A DAP+DVPAGHVAICVGSS RRFVVRATYLNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

A0A6J1GKR4 auxin-induced protein 6B-like2.5e-4690.09Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR VSR
Subjt:  VFEEVLRTVSR

A0A6J1I2L6 auxin-induced protein 6B-like1.5e-4690.09Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.8e-1244.71Show/hide
Query:  SDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAATSTLRVVSSVS
        S VP+GHV + VG    RFVV A  LNHP+F  LL ++ +EYG+T +G L IPC+  VFE+V   V  + +  A  T  +++S+S
Subjt:  SDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAATSTLRVVSSVS

O65695 Auxin-responsive protein SAUR501.9e-1136.63Show/hide
Query:  KSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAG----DAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVF
        K++ + +   ++Q+L+      R ++  +++G G      P DVP GH  + VG +  R++V  ++L HP FQ+LL +AEEE+GF +   L IPCDE VF
Subjt:  KSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAG----DAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVF

Query:  E
        +
Subjt:  E

P32295 Indole-3-acetic acid-induced protein ARG71.9e-1142.31Show/hide
Query:  SRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGPLAIPCDESVFEEVLRTVS
        S R+ A     D P G++A+ VG + +RFV+  ++LN P+FQ+LL QAEEE+G+ +  G L IPC E +F+ +   +S
Subjt:  SRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGPLAIPCDESVFEEVLRTVS

Q9SA49 Auxin-responsive protein SAUR411.5e-1151.56Show/hide
Query:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        VPAGHV + VG    RFVV A  +NHPIF  LL ++ +EYG+  +G L IPC   VFE V+ T+
Subjt:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

Q9SGU2 Auxin-responsive protein SAUR711.1e-1151.56Show/hide
Query:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        VP GHV + VG    RFVV A  LNHP+F  LL Q+ +EYG+  QG L IPC   VFE +L ++
Subjt:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family2.6e-3563.96Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        M+  + K + IR IV +RQML+RWR KAR+++ SR       PSDVP+GHVA+CVGS  RRFVVRA+YLNHPI  NLL+QAEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEE +R +SR
Subjt:  VFEEVLRTVSR

AT1G75590.1 SAUR-like auxin-responsive protein family5.8e-3563.96Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        M+ G+ K + IR IV +RQML+RWR +AR+++S  R      PSDVP+GHVA+ VGSS RRFVVRATYLNHP+ +NLL+QAEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEE +R +SR
Subjt:  VFEEVLRTVSR

AT4G34750.1 SAUR-like auxin-responsive protein family3.6e-2953.51Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE
        + K+N I  +V IRQML++W+KKA + +S+      D  SDVP GHVA+ VG + RR+VVRA +LNHPIF+ LL +AEEEYGF N GPLAIPCDES+FE+
Subjt:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VLRTVSRIFAAAAT
        ++  V+R  +++++
Subjt:  VLRTVSRIFAAAAT

AT4G34750.2 SAUR-like auxin-responsive protein family3.6e-2953.51Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE
        + K+N I  +V IRQML++W+KKA + +S+      D  SDVP GHVA+ VG + RR+VVRA +LNHPIF+ LL +AEEEYGF N GPLAIPCDES+FE+
Subjt:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VLRTVSRIFAAAAT
        ++  V+R  +++++
Subjt:  VLRTVSRIFAAAAT

AT5G10990.1 SAUR-like auxin-responsive protein family5.4e-3359.84Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        M+ GI K + IR IV +RQML++WR KAR+ +S RRS     PSDVP+GHVA+ VG S RRFVV ATYLNHPI  NLL++AEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRIFAAAATSTLR
        VFEE +R ++R      T  L+
Subjt:  VFEEVLRTVSRIFAAAATSTLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGCGTTACCGCCTCTTCTCGCCGCTC
CGGCGCCGGTGATGCTCCGTCGGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCT
TCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCC
CGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAG
GGAACTAACTGAAGATTGCGACTCGGGCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGCGTTACCGCCTCTTCTCGCCGCTC
CGGCGCCGGTGATGCTCCGTCGGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCT
TCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCC
CGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAG
GGAACTAACTGAAGATTGCGACTCGGGCTGGTGA
Protein sequenceShow/hide protein sequence
MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVS
RIFAAAATSTLRVVSSVSLGRCFLISPINRFVSKMERELTEDCDSGW