; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G022320 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G022320
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCRM domain-containing protein
Genome locationCicolChr02:4675261..4677597
RNA-Seq ExpressionCcUC02G022320
SyntenyCcUC02G022320
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022267.1 yqeI [Cucurbita argyrosperma subsp. argyrosperma]3.0e-10075.34Show/hide
Query:  MGASIISS-------HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDD
        MGASI+SS       HSLLLRSVPSS STF  +P      +A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SF+RSFS TIS  S V F EDDD
Subjt:  MGASIISS-------HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDD

Query:  GIEDEDESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D++ESDYEDE EIEDFE  D  V  G ET VAS+ SS++ S +EVK+IP LT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  GIEDEDESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIKYKHPGARTVVVVEAAGIDLK
        LKIK+LGNCP ELED VR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARK+YVRKEPDRVK  LQVKIKYKH  ART VVVEAAG DLK
Subjt:  LKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIKYKHPGARTVVVVEAAGIDLK

XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]1.2e-10484.07Show/hide
Query:  MGASIIS--SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDE
        MGASIIS  SHSLLLRS+PSSFSTFFSKP    +AAAAISTVCFHQFKP+SS  LTRESPHH R FT SA LSF+RSFS TIS PSEV FDE DD IED+
Subjt:  MGASIIS--SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDE

Query:  DESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        DESDYEDE E+ED      VG GTETGVASELSS + SRNEVK+IP LTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
Subjt:  DESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        GNCPEELED VRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARK+Y+RKEPDRVKSILQ KI+
Subjt:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]8.5e-10380.66Show/hide
Query:  MGASIIS------SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDG
        M ASIIS      SHSLLLRSVPSSFSTFFSKP    +A AA STVCFHQFKP+SS FLTR+SPH+SR FT S SLSF+R FS T+S PSEVRFDE DD 
Subjt:  MGASIIS------SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDG

Query:  IEDEDESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
        IED+DESDYEDE E+ED     +VG GTE GVASELSS + +RNEVK+IP LTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
Subjt:  IEDEDESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK

Query:  IKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        IKILGNCPE+LED VRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K++
Subjt:  IKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]3.4e-9174.64Show/hide
Query:  MGASIISS-------HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDD
        MGASI+SS       HSLLLRSVPSS STF  +P      +A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SF+RSFS  IS  S V F EDDD
Subjt:  MGASIISS-------HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDD

Query:  GIEDEDESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D+DESDYEDE EIEDFE  D  V  G ET VAS+ SS++ SR+EVK IP LT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  GIEDEDESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        LKIK+LGNCP ELED VR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARKIYVRKEPDRVK  LQ K++
Subjt:  LKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]4.5e-10484.81Show/hide
Query:  MGASIIS--SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDE
        MGASIIS  SHSLLLRSVPSSFSTFFSKP A+A AAA    VCF+QFKP SSNF TRES HHSRSF  S SLSF RSF+ TIS PSE RFDEDDD IEDE
Subjt:  MGASIIS--SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDE

Query:  DESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        DESDYEDE EI   ER+EAV  G ETGVASELSS M +RNEVK+IP LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
Subjt:  DESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE++KR+ARKIYVRKE DRVKSILQ KI+
Subjt:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein5.8e-10584.07Show/hide
Query:  MGASIIS--SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDE
        MGASIIS  SHSLLLRS+PSSFSTFFSKP    +AAAAISTVCFHQFKP+SS  LTRESPHH R FT SA LSF+RSFS TIS PSEV FDE DD IED+
Subjt:  MGASIIS--SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDE

Query:  DESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        DESDYEDE E+ED      VG GTETGVASELSS + SRNEVK+IP LTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
Subjt:  DESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        GNCPEELED VRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARK+Y+RKEPDRVKSILQ KI+
Subjt:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

A0A1S3BJF7 uncharacterized protein LOC1034903504.1e-10380.66Show/hide
Query:  MGASIIS------SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDG
        M ASIIS      SHSLLLRSVPSSFSTFFSKP    +A AA STVCFHQFKP+SS FLTR+SPH+SR FT S SLSF+R FS T+S PSEVRFDE DD 
Subjt:  MGASIIS------SHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDG

Query:  IEDEDESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
        IED+DESDYEDE E+ED     +VG GTE GVASELSS + +RNEVK+IP LTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
Subjt:  IEDEDESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK

Query:  IKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        IKILGNCPE+LED VRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K++
Subjt:  IKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein4.2e-6391.1Show/hide
Query:  ETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVN
        ETGVASELSS + +RNEVK+IP LTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED VRKLEESTGSVVVN
Subjt:  ETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVN

Query:  QIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        QIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K++
Subjt:  QIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

A0A6J1C409 uncharacterized protein LOC1110077234.0e-5875.29Show/hide
Query:  ESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        +SDYE E  I DFE  +E++G  ++    S+LSSS+ + +EVK++P LT+KEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL
Subjt:  ESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
         NCP EL+DAVR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR+ARKIYVRKEPDRVKSILQ K++
Subjt:  GNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

A0A6J1I2Z3 uncharacterized protein LOC1114700601.6e-9174.64Show/hide
Query:  MGASIISS-------HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDD
        MGASI+SS       HSLLLRSVPSS STF  +P      +A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SF+RSFS  IS  S V F EDDD
Subjt:  MGASIISS-------HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDD

Query:  GIEDEDESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D+DESDYEDE EIEDFE  D  V  G ET VAS+ SS++ SR+EVK IP LT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  GIEDEDESDYEDEGEIEDFE-RDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK
        LKIK+LGNCP ELED VR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARKIYVRKEPDRVK  LQ K++
Subjt:  LKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIK

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY1.7e-0533.71Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS
        L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E     V  +   TG+  V  IG+T+++YRP+
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY1.7e-0533.71Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS
        L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E     V  +   TG+  V  IG+T+++YRP+
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY1.7e-0533.71Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS
        L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E     V  +   TG+  V  IG+T+++YRP+
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI2.8e-0838.2Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L NC E+  D    L + + S +V  IG T+++Y+ S
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS

P71376 RNA-binding protein HI_13339.4e-0429.21Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS
        L+ K+K+ L   AH L   +   ++G +G+T G+       L  +EL+K+K+ G   E  +  +  +   T +  V  IG  +++YRPS
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein5.4e-3148.58Show/hide
Query:  STVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSF-SFT-ISVPSEVRFDEDDDGIEDEDE-SDYEDEGEIEDFERDEAVGSGTETGVASELSSSM
        S VC    +P S + L R+S HH+     S+SL   R + SF+ + VP    F   D+  +DED  S      EI D         G E G  SEL+   
Subjt:  STVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSF-SFT-ISVPSEVRFDEDDDGIEDEDE-SDYEDEGEIEDFERDEAVGSGTETGVASELSSSM

Query:  ASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS
           N       L+ KEK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+KI   CP ELED + +LEE+TGSV V QI RTVI+YRPS
Subjt:  ASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPS

Query:  ITKMKAEEEKRR
         TK+KA+E+K+R
Subjt:  ITKMKAEEEKRR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein6.2e-3544.44Show/hide
Query:  HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDEDES--DYEDE
        H+LL    P S    F +P   + + +  +    H+ KP   +F ++  P HS S          +SFS +I  P      E+D+  EDED S  +YE E
Subjt:  HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDEDES--DYEDE

Query:  GEIEDFERDEAV---GSGTETGVASELSSSMASRNEVKD----------IPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
         E E+ E+D  V     G E   ASE  S +  + E  +             L+IKEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  GEIEDFERDEAV---GSGTETGVASELSSSMASRNEVKD----------IPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK
        K+KI    P+ELEDAV+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +
Subjt:  KIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein6.2e-3544.44Show/hide
Query:  HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDEDES--DYEDE
        H+LL    P S    F +P   + + +  +    H+ KP   +F ++  P HS S          +SFS +I  P      E+D+  EDED S  +YE E
Subjt:  HSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDEDES--DYEDE

Query:  GEIEDFERDEAV---GSGTETGVASELSSSMASRNEVKD----------IPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
         E E+ E+D  V     G E   ASE  S +  + E  +             L+IKEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  GEIEDFERDEAV---GSGTETGVASELSSSMASRNEVKD----------IPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK
        K+KI    P+ELEDAV+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +
Subjt:  KIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTCGATAATCTCCTCTCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTTTCTCCACCTTCTTCTCTAAACCCCCCGCCTCCGCCACCGCCGCCGCCGCCAT
CTCCACCGTTTGCTTCCATCAATTTAAGCCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTCGCTCCGCATCCCTTTCCTTCACTC
GCTCCTTTTCCTTCACCATTTCCGTCCCCTCCGAGGTCAGATTTGACGAAGACGACGATGGAATTGAAGATGAAGATGAAAGCGATTACGAAGATGAAGGTGAAATCGAA
GATTTTGAAAGGGACGAGGCCGTTGGGAGTGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCGTCAATGGCGAGTAGAAATGAAGTGAAGGATATTCCGGGCTTGAC
AATTAAGGAGAAAAAAGAGCTGGCATCGTATGCTCATAGTTTAGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCA
TCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAGCTGGAGGATGCGGTGAGGAAATTGGAGGAATCAACTGGTTCTGTGGTG
GTGAATCAAATTGGCAGGACTGTTATTATTTACAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAGAAACGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCTGA
TCGAGTCAAATCCATTTTGCAGGTAAAAATAAAATACAAACACCCCGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTATTGATCTGAAATAG
mRNA sequenceShow/hide mRNA sequence
CAAGTTTCTTTTAGCTTCAGGGAAGCCGAACCAAGAAGCAAGCAAAAATGGGGGCTTCGATAATCTCCTCTCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTTTCTCC
ACCTTCTTCTCTAAACCCCCCGCCTCCGCCACCGCCGCCGCCGCCATCTCCACCGTTTGCTTCCATCAATTTAAGCCCAACAGTTCAAACTTCCTCACTCGCGAATCTCC
TCACCATTCCCGGTCTTTCACTCGCTCCGCATCCCTTTCCTTCACTCGCTCCTTTTCCTTCACCATTTCCGTCCCCTCCGAGGTCAGATTTGACGAAGACGACGATGGAA
TTGAAGATGAAGATGAAAGCGATTACGAAGATGAAGGTGAAATCGAAGATTTTGAAAGGGACGAGGCCGTTGGGAGTGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCT
TCGTCAATGGCGAGTAGAAATGAAGTGAAGGATATTCCGGGCTTGACAATTAAGGAGAAAAAAGAGCTGGCATCGTATGCTCATAGTTTAGGGAAGAAGCTGAAAAGTCA
GTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAGC
TGGAGGATGCGGTGAGGAAATTGGAGGAATCAACTGGTTCTGTGGTGGTGAATCAAATTGGCAGGACTGTTATTATTTACAGGCCCAGCATCACAAAAATGAAAGCAGAG
GAAGAGAAACGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCTGATCGAGTCAAATCCATTTTGCAGGTAAAAATAAAATACAAACACCCCGGAGCTCGAACCGTGGT
CGTCGTGGAAGCAGCAGGTATTGATCTGAAATAGGATTCACATCTTGCAGGTTTATGTTGGAGGAACAGATTTTGAATTTTCATCCCAATGTTTAGAGATTAAACAAGAT
TATAGGTTGTTTGACAAGAGTTAGTAGGAGGAGCTCAAACTCTACTTCCGTGTATCTCATGTTTTGTTGTTTGCTTTCTACTCATGCTTTTGAAACTTAAGCC
Protein sequenceShow/hide protein sequence
MGASIISSHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDEDESDYEDEGEIE
DFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVV
VNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIKYKHPGARTVVVVEAAGIDLK