; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G022410 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G022410
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionchromatin remodeling protein SHL-like
Genome locationCicolChr02:4785924..4791178
RNA-Seq ExpressionCcUC02G022410
SyntenyCcUC02G022410
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0035067 - negative regulation of histone acetylation (biological process)
GO:2000028 - regulation of photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0035064 - methylated histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001025 - Bromo adjacent homology (BAH) domain
IPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger
IPR043151 - Bromo adjacent homology (BAH) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448075.2 PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo]1.2e-12098.15Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHF+CESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSKVAETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

XP_011658548.1 chromatin remodeling protein SHL [Cucumis sativus]2.6e-12097.69Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLDHF+CESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSKVAETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

XP_022135772.1 chromatin remodeling protein SHL-like [Momordica charantia]5.4e-11894.91Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFK+YTKLDAVGNDDYFCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMT EEAKKLDHFFCESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TS++AETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

XP_022924958.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata]2.3e-11694.91Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLDHFFCESCS EGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSK+AETKVD+KRRRR
Subjt:  TSKVAETKVDTKRRRR

XP_038889039.1 chromatin remodeling protein SHL-like [Benincasa hispida]3.1e-12198.61Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAF+PDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSKVAETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

TrEMBL top hitse value%identityAlignment
A0A0A0K4E7 Uncharacterized protein1.3e-12097.69Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLDHF+CESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSKVAETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

A0A1S3BJS6 chromatin remodeling protein SHL-like5.6e-12198.15Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHF+CESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSKVAETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

A0A6J1C3P9 chromatin remodeling protein SHL-like2.6e-11894.91Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFK+YTKLDAVGNDDYFCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMT EEAKKLDHFFCESCSSEGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TS++AETKVDTKRRRR
Subjt:  TSKVAETKVDTKRRRR

A0A6J1EAH8 chromatin remodeling protein SHL-like isoform X11.1e-11694.91Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLDHFFCESCS EGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSK+AETKVD+KRRRR
Subjt:  TSKVAETKVDTKRRRR

A0A6J1I3B3 chromatin remodeling protein SHL isoform X11.6e-11594.44Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKA RQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLDHFFCESCS EGQKKLQNS+S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKRRRR
        TSK+AETKVD+KRRRR
Subjt:  TSKVAETKVDTKRRRR

SwissProt top hitse value%identityAlignment
F4JGB7 Chromatin remodeling protein At4g042603.3e-6263.16Show/hide
Query:  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFD
        GDCVLMRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+C FD
Subjt:  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFD

Query:  YNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSESTSKVAETKVDTKR
        Y + TGAF PDRVAVY KCEMPYN D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S   + K   ++
Subjt:  YNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSESTSKVAETKVDTKR

F4JL28 Chromatin remodeling protein EBS4.3e-8670.81Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSES
         VHTFKNYT+L+ VG +DY+CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDHF C  CSS+   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSES

Query:  TSKVAETKV
        +S   + KV
Subjt:  TSKVAETKV

Q3UHR0 BAH and coiled-coil domain-containing protein 15.1e-1033.58Show/hide
Query:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--
        + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V   + Y ++  
Subjt:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--

Query:  ---DAVGNDDYFCRFDYNSTTGAF-NPDRVAVYC
                D Y+    Y+ TTG     D V V C
Subjt:  ---DAVGNDDYFCRFDYNSTTGAF-NPDRVAVYC

Q9FEN9 Chromatin remodeling protein SHL2.1e-8871.36Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        C VH+F +YTKLD+VGNDD+FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D+F+CE CS + Q+ L NS S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKR
        TS   + KV+ KR
Subjt:  TSKVAETKVDTKR

Q9P281 BAH and coiled-coil domain-containing protein 12.3e-1032.84Show/hide
Query:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDA
        + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V   + Y ++  
Subjt:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDA

Query:  V-----GNDDYFCRFDYNSTTGAF-NPDRVAVYC
                D Y+    Y+ TTG     D V + C
Subjt:  V-----GNDDYFCRFDYNSTTGAF-NPDRVAVYC

Arabidopsis top hitse value%identityAlignment
AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein7.1e-6062.16Show/hide
Query:  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTT
        MRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY + T
Subjt:  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTT

Query:  GAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSESTSKVAETKVDTKR
        GAF PDRVAVY KCEMPYN D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S   + K   ++
Subjt:  GAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSESTSKVAETKVDTKR

AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein3.1e-8770.81Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSES
         VHTFKNYT+L+ VG +DY+CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDHF C  CSS+   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSES

Query:  TSKVAETKV
        +S   + KV
Subjt:  TSKVAETKV

AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein8.6e-9070.83Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSES
         VHTFKNYT+L+ VG +DY+CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDHF C  CSS+   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSES

Query:  TSKVAETKVDTKRRRR
        +S   + KV+TKRR+R
Subjt:  TSKVAETKVDTKRRRR

AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.5e-8971.36Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES
        C VH+F +YTKLD+VGNDD+FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D+F+CE CS + Q+ L NS S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSES

Query:  TSKVAETKVDTKR
        TS   + KV+ KR
Subjt:  TSKVAETKVDTKR

AT4G39100.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein3.5e-7576.07Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDW
        C VH+F +YTKLD+VGNDD+FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+W
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTTATGAGGCCCTCCGAACCCTC
GAAACCTTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGCGGTC
GGAGACAGTTTCATGGCTCGAAGGAGCTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGAAAGTGTACGGTGCATACGTTTAAGAATTATACC
AAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTATTGCAAGTGTGAGATGCC
TTATAATCCCGATGACCTAATGGTTCAGTGCGAGAGCTGCAGTGACTGGTTCCATCCTGCTTGTATAGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTCTTCT
GTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCAGAGTCTACATCTAAAGTTGCAGAGACTAAGGTGGATACAAAACGACGCCGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
TTGCTCCACCGTCCGTCGCTTAGTAGTATTGGCTTTGGCATATGCCGCCACGTGACAACCAAATCCACTCCTCCGCCGGATATTTCCCCCTTTTTCACTGCCACCGACCA
CCCTGCAGGGCTCCCTTTTGATGGCCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTT
ATGAGGCCCTCCGAACCCTCGAAACCTTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCC
GGAGGAATCAATTGGCGGTCGGAGACAGTTTCATGGCTCGAAGGAGCTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGAAAGTGTACGGTGC
ATACGTTTAAGAATTATACCAAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTG
TATTGCAAGTGTGAGATGCCTTATAATCCCGATGACCTAATGGTTCAGTGCGAGAGCTGCAGTGACTGGTTCCATCCTGCTTGTATAGAAATGACTGCAGAAGAAGCTAA
AAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCAGAGTCTACATCTAAAGTTGCAGAGACTAAGGTGGATACAAAACGAC
GCCGGAGGTGATGATAATGTAAATAAACAAAAATACGGTGACTTAGAGTCATTAAAAGAACCAACCAGAGCTTCTAACTTTCTAATGAGTTGGAACAAGTGCATAGATGT
AGGATAATGTAAATACTAGCTCTAGTGTGTTCAACATTCATTGAAGCAGGTAGAGAGACTGGTTTGAAATGTATTGAAGTTCTTTTATTTAAAATGGCCCTTTCTTCTGT
GAAGGTTGCAGATTTGTTTCATTTCCTCAAAACTCCTAAACTTTCAACTCTTTAATCCATTTTTCTCATTATTCTTAGCTGATGCTGATGTATAGGTGAAATATCTGTCA
AGGGCACTAGGAAAGATATTTTTATGTAATTATTTGGTTGCAAGTTAATTGAACTGGGCTTCATTTGACTGGCTACTCTAGTGTGTCCCAACCTTTCCCTTGTAGAAATT
TTAATTGCAT
Protein sequenceShow/hide protein sequence
MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYT
KLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSESTSKVAETKVDTKRRRR