; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G023530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G023530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCicolChr02:6470239..6475862
RNA-Seq ExpressionCcUC02G023530
SyntenyCcUC02G023530
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]5.8e-9576.92Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKH  YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQ ANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDR+ IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQ
        CC +S  IITEVSDQNFVD+ PGELSG MP AKRL+KASSG   N Q
Subjt:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQ

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]1.2e-9274.12Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  QLDAEQTHWTDEKH LYLDSLEASFVQ LHQHR   ALS K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP
        QK+RRKPI P+++SSELM+LQDASWQ ANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CSDR+ IR  TNSC SAR+SQ   P
Subjt:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        CC +S  IITEVSDQNFVD+ PGELS  MPIAKRL+KASS  S + QVVP KRLS
Subjt:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]1.9e-9877.25Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKH  YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQ ANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDR+ IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        CC +S  IITEVSDQNFVD+ PGELSG MP AKRL+KASSG   N QVVP KRLS
Subjt:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]6.9e-8869.53Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  QLDA QTHWT+EKH L+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPN++SSE M+LQDASWQ AN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CSDR  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        PCC DS+ I+TEVSDQNFVD  PGELS   PI KRL+KASS SSGN++V P KRLS
Subjt:  PCCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

XP_038887003.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]8.3e-11081.89Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTKQK
        M  SHT SSISPPPL DRRQSLMPPSA+DSTR  SQS SSSIT+DGSN F + +HSLQLDAEQTHWTDEKH LYLDSLEASFVQGLHQHRRR ALS +QK
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTKQK

Query:  IRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCC
        +  KP MPN++SSELMILQDASWQ ANIGRNDP LD TADSPAILEDLWINRFPSAGKQCT E PD+LEECG+CSDR+ +RNT+NSCGSARSSQQIPPCC
Subjt:  IRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCC

Query:  HDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLSE
         DSNIIITEVSDQNFVDD P ELSG +PIAKRL+K SS SSGNDQVVP KR S+
Subjt:  HDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLSE

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein5.8e-9374.12Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  QLDAEQTHWTDEKH LYLDSLEASFVQ LHQHR   ALS K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP
        QK+RRKPI P+++SSELM+LQDASWQ ANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CSDR+ IR  TNSC SAR+SQ   P
Subjt:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        CC +S  IITEVSDQNFVD+ PGELS  MPIAKRL+KASS  S + QVVP KRLS
Subjt:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X19.3e-9977.25Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKH  YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQ ANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDR+ IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        CC +S  IITEVSDQNFVD+ PGELSG MP AKRL+KASSG   N QVVP KRLS
Subjt:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

A0A5D3C4A3 Cold regulated protein 27, putative isoform 22.8e-9576.92Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKH  YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQ ANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDR+ IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQ
        CC +S  IITEVSDQNFVD+ PGELSG MP AKRL+KASSG   N Q
Subjt:  CCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQ

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X23.3e-8869.53Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  QLDA QTHWT+EKH L+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPN++SSE M+LQDASWQ AN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CSDR  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        PCC DS+ I+TEVSDQNFVD  PGELS   PI KRL+KASS SSGN++V P KRLS
Subjt:  PCCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X21.4e-8668.75Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  QLDA QTHWTDEKH L+LD+LEASFVQ LH++R   A S+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPN++SSE M+LQDASWQ ANIGR DPLL  TADSPAILED+WIN FPSAG Q T ET D+LEECG+CSDR  IRN TNSC SARSSQQIP
Subjt:  KQKIRRKPIMPNMTSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS
        PCC DS+ I+ EVSDQNFVD  PGELSG  PI KRL+KASS S GND+V P KRLS
Subjt:  PCCHDSNIIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSGSSGNDQVVPSKRLS

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 276.0e-1030.25Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKHSLYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD

Query:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIII---TEVSDQNF
          WQ  N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ K+      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL
        V++    + G    +K+++    S SS  DQVVP  +L
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL

Q8L983 Cold-regulated protein 288.3e-0427.05Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNMTSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH+ YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNMTSSELM

Query:  ILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRN---TTNSCGSARSSQQIPPCCHDSNIIITEVSDQ
        +LQ+  WQ  N G+    L+ +++           RF                       R  +RN    +N   +  ++ Q    CHD     +E S Q
Subjt:  ILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRN---TTNSCGSARSSQQIPPCCHDSNIIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSGSSG--NDQVVPSKRLSER
        NF ++   E  G +   KR R+A++  S    DQVVP + +  R
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSGSSG--NDQVVPSKRLSER

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)5.9e-0527.05Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNMTSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH+ YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNMTSSELM

Query:  ILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRN---TTNSCGSARSSQQIPPCCHDSNIIITEVSDQ
        +LQ+  WQ  N G+    L+ +++           RF                       R  +RN    +N   +  ++ Q    CHD     +E S Q
Subjt:  ILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRN---TTNSCGSARSSQQIPPCCHDSNIIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSGSSG--NDQVVPSKRLSER
        NF ++   E  G +   KR R+A++  S    DQVVP + +  R
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSGSSG--NDQVVPSKRLSER

AT4G33980.2 FUNCTIONS IN: molecular_function unknown5.9e-0527.05Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNMTSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH+ YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNMTSSELM

Query:  ILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRN---TTNSCGSARSSQQIPPCCHDSNIIITEVSDQ
        +LQ+  WQ  N G+    L+ +++           RF                       R  +RN    +N   +  ++ Q    CHD     +E S Q
Subjt:  ILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRN---TTNSCGSARSSQQIPPCCHDSNIIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSGSSG--NDQVVPSKRLSER
        NF ++   E  G +   KR R+A++  S    DQVVP + +  R
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSGSSG--NDQVVPSKRLSER

AT5G42900.1 cold regulated gene 274.2e-1130.25Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKHSLYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD

Query:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIII---TEVSDQNF
          WQ  N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ K+      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL
        V++    + G    +K+++    S SS  DQVVP  +L
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL

AT5G42900.2 cold regulated gene 274.2e-1130.25Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKHSLYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD

Query:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIII---TEVSDQNF
          WQ  N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ K+      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL
        V++    + G    +K+++    S SS  DQVVP  +L
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL

AT5G42900.3 cold regulated gene 271.9e-1130.38Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKHSLYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNMTSSELMILQD

Query:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCC--HDSNIIITEVSDQNFV
          WQ  N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ K+      S GSA S +Q+      HD   +  EVSDQNFV
Subjt:  ASWQMANIGRNDPLLD--NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCC--HDSNIIITEVSDQNFV

Query:  DDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL
        ++    + G    +K+++    S SS  DQVVP  +L
Subjt:  DDCPGELSGAMPIAKRLRKA-SSGSSGNDQVVPSKRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATC
CGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGTTTAT
ATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATG
ACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGATGGCTAACATTGGGAGGAATGATCCTTTATTGGATAACACTGCTGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAGTGTGGAAATTGTAGTGATAGGAAACGCATAAGAAACACAA
CGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATATAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCA
GGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGGTTCTTCGGGCAATGACCAGGTTGTACCATCTAAAAGATTATCAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
CACCATTCGCCTCTTCTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTC
CTTCTATTTTTGGTTCTTTCGATCGATTTTCCCTTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACG
GCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATT
CTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGTTTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGG
GATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATGACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGATGGCTAACATTGG
GAGGAATGATCCTTTATTGGATAACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTG
ATCTCCTTGAAGAGTGTGGAAATTGTAGTGATAGGAAACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGAT
TCTAATATAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGG
TTCTTCGGGCAATGACCAGGTTGTACCATCTAAAAGATTATCAGAAAGATAAAACCCAAACGTCATATTGACTTCAGAACAAAGATTGCCAGAGGCCATATTGTCTTCAG
AACATCCTCAAAGTCAAAACTTGTGCGTCCAAATTCAGATTTGTGTTACTGTGTGAGAGGGAGCTGACAACAATTCATTTCAACAGGTGAAAATACCTGGCTGTTCAAGC
TCATTAACAAAATACGACATGGTTCTCTTTCCTTTTTGAAAGAGCATTGTAAAGAAAATAAGGGAATTGACAGGTAATAATTCTACCAGAAGATTTGCGGCAGGAAGGAG
AAAATATGTTTGTGTATAAACTAAACTTTTTCCTAGTTCAAATATTGAGTGAAATATATGTTAATCCTTTCTTTTCCCCTGTTTTCCTTTTTCTTAGAGTTTGAAAAGAT
GGAAATTCTACTAGATGTAGGGCATGAATATAGAGAAGCTAGACAACACCCTGATAGTGAGATAGATACACACCCTTTTTTTTTATTTGTTTGCACTACTCTCATTTTGA
AGTTCTCAAGTGTAAATCATTACATAAAGCAAAGGGTCACGCTTTTGTGACGCTGAAAGAGAATTGAACAAGTTTATTGATTTTCTTTAGCGGGTAAGGTTTTTTCTTTG
TATTGTATCCTGGCGTTTTCACAATTTTTTGATATTTGTACTTGTGTTGGTAGCAATTGTAATTTTTACTGCAACTTAGCTTCAGCTAGAGCTATTGTTCTCACTCTGCT
GCTAGGTGGCAACATTTGTGTTCAAGGGATTTTGAGGACATAGTTAGATAATGAAATAGTAGAGCTTTTCTCTTGTTTATGTTATGGGGTGCATCTCAGATGGTTGATGA
CAATTTACTTACGTTAAGTGCTTGATTAATGTGTGTGATTTTATTCCACCAAGTAAAACTCTGGATATACAATTTTGTTAAGCAATTGGAAGAGTGCGTGAGTATTTGTT
AGTGCTATGTTTGTTTGGATCCCTTTTTTTGCCTTTTTTGTGGGCTAACTTTGGCCTCTTTTCCTAGAAACCAAGTTCTTTTGAATCTCTGGTGAAATTGATAGTAGTTT
TAGTATTTTAGGGTGGCATAAAACCATCCTCTAATTAGTATTTGTGGAGTCATGTTGGTGCCAAATTTTAAGGTGACAGAATTGAGGCGAACTTTTTGACTAGAGGATGG
TTTAGTTCTGCTTTCAGTGACACATTCTAAGGGAATCACTGGATGAGGTGGTAGTCACCAAAACGTGACGATGCACGATCATATTTGATCGGTCAATGGAAGGAAGGGCT
GGGTGTTCTATTGAGTCGTTATTGACTTTCTTCTAGATCATGTGACATGGCTGATGCAGGGGTATCCATTCAACTAAGGATGGTGCATCAGGGGGTACTAAGATTTCTTC
TTGGGAACTTCTTTTTGAGAAGCTTGCTACCTTCATTCTTGTTAGTTATACTCTCCATTGTGGAGATGGATGTGGTGATTCCAATTTGATGGTATTATTAATAAGAGCAT
TAGTTTATGGCAATGCTCTGTTGTGGGCCAATTCATTGATGGTTGATGAGTAATATTTGGGAAAGAAATGAGGTGGCAACTATTACTTTATTGGACGATGGTTTGGTCAC
CTTTTCGTTTCGTGGTACTCAATCTAGTGATTGGGGGCTAATCGACCCTCTCATATTTTGGAGGTGAGCTGCCTATATATCAACAGCTTGGTTCGATAACTATTGGTTTT
TTTTTTCAATTAAAAATTGAACCAAACCAATTTTTTTGTTTTCTCCAAATAGCTGGGGTTGGTTCGGTTTTTTTGGC
Protein sequenceShow/hide protein sequence
MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHSLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNM
TSSELMILQDASWQMANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRKRIRNTTNSCGSARSSQQIPPCCHDSNIIITEVSDQNFVDDCP
GELSGAMPIAKRLRKASSGSSGNDQVVPSKRLSER