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CcUC02G023660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G023660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCytochrome c oxidase subunit 3
Genome locationCicolChr02:6610370..6610692
RNA-Seq ExpressionCcUC02G023660
SyntenyCcUC02G023660
Gene Ontology termsGO:0019646 - aerobic electron transport chain (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004129 - cytochrome-c oxidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP95426.1 cytochrome c oxidase subunit 3 [Phtheirospermum japonicum]7.0e-1892.31Show/hide
Query:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        MA+FGFTRSFGN+RRRCDVHALISRGATLLSLG IFILYTMFVWW DVLRES
Subjt:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
KAG6604293.1 Cytochrome c oxidase subunit 3, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0663.27Show/hide
Query:  FGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        F   RSFGNHRRRCDVHALISRG      G       +FVWW DVLRES
Subjt:  FGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
PUZ39219.1 hypothetical protein GQ55_9G268800 [Panicum hallii var. hallii]1.6e-1790.38Show/hide
Query:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        MA+FGFTRSFGNH RRCDVHALISRGATLLSLG IF+LYTMFVWW DVLRES
Subjt:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
VDD26767.1 unnamed protein product [Brassica rapa]5.9e-1788.46Show/hide
Query:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        MA+FGFTRSFGNHRRRCDVHA ISRGA LLSLG IF+LYTMFVWW DVLRES
Subjt:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
YP_009315972.1 cytochrome oxidase subunit 3 [Cocos nucifera]1.5e-0745Show/hide
Query:  MRPKRAPSFTILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHAL--------------------------ISRGATLLSLGFIFILYTMFVWWLDVLRES
        MRPKRAP FT L GGGEGG     H    + F    +R   H +                             GATLLSLG IFILYTMFVWW DVLRES
Subjt:  MRPKRAPSFTILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHAL--------------------------ISRGATLLSLGFIFILYTMFVWWLDVLRES
TrEMBL top hitse value%identityAlignment
A0A2T7C796 Cytochrome c oxidase subunit 37.5e-1890.38Show/hide
Query:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        MA+FGFTRSFGNH RRCDVHALISRGATLLSLG IF+LYTMFVWW DVLRES
Subjt:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
A0A2Z2CD33 Cytochrome c oxidase subunit 37.1e-0845Show/hide
Query:  MRPKRAPSFTILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHAL--------------------------ISRGATLLSLGFIFILYTMFVWWLDVLRES
        MRPKRAP FT L GGGEGG     H    + F    +R   H +                             GATLLSLG IFILYTMFVWW DVLRES
Subjt:  MRPKRAPSFTILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHAL--------------------------ISRGATLLSLGFIFILYTMFVWWLDVLRES
A0A3P6D6P0 Cytochrome c oxidase subunit 32.9e-1788.46Show/hide
Query:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        MA+FGFTRSFGNHRRRCDVHA ISRGA LLSLG IF+LYTMFVWW DVLRES
Subjt:  MAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
A0A4D8YNU3 Mitochondrial protein YMF192.1e-0768.89Show/hide
Query:  ILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHALISRGATLLSLG
        +L   G  GSKSMA+FGFTRSFGN+RRRCDVHALISRG      G
Subjt:  ILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHALISRGATLLSLG
Q1KZN6 Cytochrome c oxidase subunit 3 (Fragment)2.3e-0670.45Show/hide
Query:  SFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
        SFGNHRR          GATLLSLG IF+LYTMFVWW DVLRES
Subjt:  SFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRES
SwissProt top hitse value%identityAlignment
P14853 Cytochrome c oxidase subunit 32.2e-0692.59Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GATLLSLG IFILYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES
P15953 Cytochrome c oxidase subunit 32.2e-0692.59Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GATLLSLG IFILYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES
P32808 Cytochrome c oxidase subunit 32.2e-0692.59Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GATLLSLG IFILYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES
Q03227 Cytochrome c oxidase subunit 32.2e-0692.59Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GATLLSLG IFILYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES
Q36952 Cytochrome c oxidase subunit 33.7e-0688.89Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GATLLSLG IF+LYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES
Arabidopsis top hitse value%identityAlignment
AT2G07687.1 Cytochrome c oxidase, subunit III7.7e-0788.89Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GA LLSLG IFILYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES
ATMG00730.1 cytochrome c oxidase subunit 37.7e-0788.89Show/hide
Query:  GATLLSLGFIFILYTMFVWWLDVLRES
        GA LLSLG IFILYTMFVWW DVLRES
Subjt:  GATLLSLGFIFILYTMFVWWLDVLRES

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCCAAAAGAGCCCCTTCTTTTACCATTTTAGCGGGTGGAGGTGAAGGGGGATCCAAGTCCATGGCCCATTTCGGGTTCACTCGGAGCTTTGGCAACCACCGTAG
GAGGTGTGATGTACATGCACTCATTTCAAGGGGTGCAACACTTCTAAGTTTGGGCTTCATATTTATCCTATATACCATGTTCGTATGGTGGCTCGATGTTCTACGTGAAT
CTTTCAATTGGTTAGAATTCGTTACT
mRNA sequenceShow/hide mRNA sequence
ATAGAAAGAAAATGAGACCCAAAAGAGCCCCTTCTTTTACCATTTTAGCGGGTGGAGGTGAAGGGGGATCCAAGTCCATGGCCCATTTCGGGTTCACTCGGAGCTTTGGC
AACCACCGTAGGAGGTGTGATGTACATGCACTCATTTCAAGGGGTGCAACACTTCTAAGTTTGGGCTTCATATTTATCCTATATACCATGTTCGTATGGTGGCTCGATGT
TCTACGTGAATCTTTCAATTGGTTAGAATTCGTTACT
Protein sequenceShow/hide protein sequence
MRPKRAPSFTILAGGGEGGSKSMAHFGFTRSFGNHRRRCDVHALISRGATLLSLGFIFILYTMFVWWLDVLRESFNWLEFVT