; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G024190 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G024190
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionpumilio homolog 12-like
Genome locationCicolChr02:7527861..7529476
RNA-Seq ExpressionCcUC02G024190
SyntenyCcUC02G024190
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]2.9e-9469.26Show/hide
Query:  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPL
        HR+VV LIS L Y CQQW I L M PHVLTLAKDF  GH+V++SCF +  P  NELI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVL+SPL
Subjt:  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPL

Query:  IQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVA
        IQD  +LS HPYGNYVIQFMIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L+QICT++YGN+V+QT MS+A
Subjt:  IQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVA

Query:  KGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKLQEF
        KG   +LLE+AIKSHW VLQ H YG+NVI+  +R KKK+KL ++
Subjt:  KGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKLQEF

KAG8497997.1 hypothetical protein CXB51_006726 [Gossypium anomalum]1.2e-3935.76Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYS
        + +H L++H   N  +  L +  +Q     LLL L+T    F+  C   LG R V KL+ R+  S +Q +I LS + P  +TL  +   GH ++  C  +
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYS

Query:  LSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKF
         S    + I   IA NC ++A +++GCC+L +C+ Y      + R+ +++ +I +A  LS H YGNYV+QF++ +   ++   +I +L+  +V+LSM+K+
Subjt:  LSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKF

Query:  GSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHK
        GSNVVEKC+ C       II EI+    +   L++  D YGNYVIQ+A+ V+KG+ +  L R I  H+ VLQ H +GK V+   K  K
Subjt:  GSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHK

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]7.2e-8570.25Show/hide
Query:  NANGRINNNNNNN---NNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLAACLHHLGHRVVVKLISRLTYSC
        N N  I+N++ N+   N+N +L ++L++LTT  +H +I+HPLGN FLLHLLQ    H TFINHLLLSL T S  HFL   LH+LG+RVVV LIS L Y C
Subjt:  NANGRINNNNNNN---NNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLAACLHHLGHRVVVKLISRLTYSC

Query:  QQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNY
        QQW IAL MSPHVLTLAKDFQGGH+V++SCF S SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVL++PLI+DA +LS HPYGNY
Subjt:  QQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNY

Query:  VIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        VIQFMIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  VIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]6.5e-7051.72Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        +H L+LHPLGN+ +  L +  H+ FI  LLLSLI     FLA CLH LG + VVKL+ RL+    Q   A+ +S H + LAK    GH VL +CF +LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VLV+PLIQ+A +LS H Y N+VIQF+I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL
        VVEKCL C E     II+EI+E  N+   +Q+ T++YGNYV Q A+SVAKG A+ LL RAIKS   +L+FHPYG++V+A A + K++S +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL

XP_022725062.1 putative pumilio homolog 8, chloroplastic [Durio zibethinus]2.4e-4033.79Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL
        +++H L++H   N  +  L ++ +Q     LL  L+ S   FL  C    G R V K + R++   Q+  +   + P  +TL  D   GH ++  CF   
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG
        S    +L++  I ++C ++A +++GCC+LQ+C++++     + R+ L++ +  +A  LS HPYGNYV+Q+++ +   ++   II  L   +V LSM+K+G
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG

Query:  SNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL
        SNVVEKCL    EG    II EI+   ++   L++  D YGNYV+Q+A+ V+KG+ H  L   I+ H+  L  H +GK V+A  K  K + +L
Subjt:  SNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein2.0e-7270.53Show/hide
Query:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE
        +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVL+SPLIQD  +LS HPYGNYVIQFMIQLDG NIG RII EL +KFV LSMDK+GSNVVE
Subjt:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE

Query:  KCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKLQEF
        KCLSCCEG  + II+EILE N  ++L+QICT++YGN+V+QT MS+AKG   +LLE+AIKSHW VLQ H YG+NVI+  +R KKK+KL ++
Subjt:  KCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKLQEF

A0A1S3C139 putative pumilio homolog 8, chloroplastic3.5e-8570.25Show/hide
Query:  NANGRINNNNNNN---NNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLAACLHHLGHRVVVKLISRLTYSC
        N N  I+N++ N+   N+N +L ++L++LTT  +H +I+HPLGN FLLHLLQ    H TFINHLLLSL T S  HFL   LH+LG+RVVV LIS L Y C
Subjt:  NANGRINNNNNNN---NNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLAACLHHLGHRVVVKLISRLTYSC

Query:  QQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNY
        QQW IAL MSPHVLTLAKDFQGGH+V++SCF S SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVL++PLI+DA +LS HPYGNY
Subjt:  QQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNY

Query:  VIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        VIQFMIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  VIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like3.1e-7051.72Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        +H L+LHPLGN+ +  L +  H+ FI  LLLSLI     FLA CLH LG + VVKL+ RL+    Q   A+ +S H + LAK    GH VL +CF +LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VLV+PLIQ+A +LS H Y N+VIQF+I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL
        VVEKCL C E     II+EI+E  N+   +Q+ T++YGNYV Q A+SVAKG A+ LL RAIKS   +L+FHPYG++V+A A + K++S +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL

A0A6P3YS61 pumilio homolog 12-like7.6e-4035.93Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL
        +++H L++   GN  +  L++  +   ++ +L+S+I++   F   C+   G RVV KL+  L    QQ+    ++S   + L K   G H V++ CF  L
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYS-----NDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALS
        SP  N+ +L  +A NC E+A +++GCCILQ C+ Y+       +  + ++ L++ +I +A  LS HPYGNYV+Q +I          I+ +L+ K+V+LS
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYS-----NDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALS

Query:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKK
        M+K GSNVVEKCL  S  E     I+ EI+   N    L +  D YGNYV Q+A+ V+ G  H  L R I  H   L  HP+GK V+  A+  K+
Subjt:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKK

A0A6P5XBS2 putative pumilio homolog 8, chloroplastic1.2e-4033.79Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL
        +++H L++H   N  +  L ++ +Q     LL  L+ S   FL  C    G R V K + R++   Q+  +   + P  +TL  D   GH ++  CF   
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG
        S    +L++  I ++C ++A +++GCC+LQ+C++++     + R+ L++ +  +A  LS HPYGNYV+Q+++ +   ++   II  L   +V LSM+K+G
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG

Query:  SNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL
        SNVVEKCL    EG    II EI+   ++   L++  D YGNYV+Q+A+ V+KG+ H  L   I+ H+  L  H +GK V+A  K  K + +L
Subjt:  SNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL

SwissProt top hitse value%identityAlignment
Q1PFN9 Pumilio homolog 94.4e-2932.86Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSS-HHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS
        V  L + P GN  +  L   S +     L++S++TS+    +  CL+  G RVV K+I  +    Q   +   + P  L L KD  G H V++SC  +L 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSS-HHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE LV+ + +++ +LS  P+GNYV+Q++I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +V+EKCL         I+ E+L   N   LLQ   D Y NYVIQTA+SV KG     L   +   +  L   PY K + +
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

Q9C9R6 Putative pumilio homolog 7, chloroplastic2.7e-3432.97Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL    +     ++L         +   L+  G RVV +L+  +    Q   + L++ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE L++ + +++  L+  P+GNY +QF+I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL  C      I+ E++   + +QLLQ   D Y N+VIQ A++  KG  H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

Q9LDW3 Pumilio homolog 113.1e-3031.03Show/hide
Query:  ITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQ
        + I+ K   N+V  L   P GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +T   Q   +  ++ P  L+L ++  G H 
Subjt:  ITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQ

Query:  VLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKF
        +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E LV  + +++  L+  P+GNY++Q++I+      G  ++ EL+  +
Subjt:  VLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKF

Query:  VALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        V L+  KFGS+VVEKCL         I+ E++   N   LLQ   D Y NYVIQ A+S  KG     L   ++  +  L+  PY K + +
Subjt:  VALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

Q9LM20 Putative pumilio homolog 8, chloroplastic1.3e-3331.54Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  +    Q   +  ++ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE LV+ + +++  L+  PYGNY +QF+++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL+ C      I+ E++   + + L+Q   D Y N+VIQ A++V KG+ H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

Q9LVC3 Pumilio homolog 121.9e-2730.61Show/hide
Query:  NSNANANGRINNNNNNNNNNNYLITILKKLTTNDVH-----------SLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVK
        NS A A G+I     + +   +L  I  +   ND+             L++ P GN  +  LL+  ++     ++ S+       +       G R V K
Subjt:  NSNANANGRINNNNNNNNNNNYLITILKKLTTNDVH-----------SLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVK

Query:  LISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADN
        ++       +   I  ++   ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    LVS +  +A  
Subjt:  LISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADN

Query:  LSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHR
        LS  P+GNYV+Q++ +L      + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  D YGNYVIQ A+  +KGN H 
Subjt:  LSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHR

Query:  LLERAIKSHWFVLQFHPYGKNVIALAKRHK
        LL  AIK +   L+ +PYGK V++     K
Subjt:  LLERAIKSHWFVLQFHPYGKNVIALAKRHK

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 89.5e-3531.54Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  +    Q   +  ++ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE LV+ + +++  L+  PYGNY +QF+++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL+ C      I+ E++   + + L+Q   D Y N+VIQ A++V KG+ H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT1G35730.1 pumilio 93.1e-3032.86Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSS-HHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS
        V  L + P GN  +  L   S +     L++S++TS+    +  CL+  G RVV K+I  +    Q   +   + P  L L KD  G H V++SC  +L 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSS-HHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE LV+ + +++ +LS  P+GNYV+Q++I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +V+EKCL         I+ E+L   N   LLQ   D Y NYVIQTA+SV KG     L   +   +  L   PY K + +
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT1G78160.1 pumilio 71.9e-3532.97Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL    +     ++L         +   L+  G RVV +L+  +    Q   + L++ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE L++ + +++  L+  P+GNY +QF+I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL  C      I+ E++   + +QLLQ   D Y N+VIQ A++  KG  H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT4G08840.1 pumilio 112.2e-3131.03Show/hide
Query:  ITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQ
        + I+ K   N+V  L   P GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +T   Q   +  ++ P  L+L ++  G H 
Subjt:  ITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQ

Query:  VLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKF
        +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E LV  + +++  L+  P+GNY++Q++I+      G  ++ EL+  +
Subjt:  VLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKF

Query:  VALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        V L+  KFGS+VVEKCL         I+ E++   N   LLQ   D Y NYVIQ A+S  KG     L   ++  +  L+  PY K + +
Subjt:  VALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT5G56510.1 pumilio 121.3e-2830.61Show/hide
Query:  NSNANANGRINNNNNNNNNNNYLITILKKLTTNDVH-----------SLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVK
        NS A A G+I     + +   +L  I  +   ND+             L++ P GN  +  LL+  ++     ++ S+       +       G R V K
Subjt:  NSNANANGRINNNNNNNNNNNYLITILKKLTTNDVH-----------SLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVK

Query:  LISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADN
        ++       +   I  ++   ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    LVS +  +A  
Subjt:  LISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADN

Query:  LSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHR
        LS  P+GNYV+Q++ +L      + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  D YGNYVIQ A+  +KGN H 
Subjt:  LSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHR

Query:  LLERAIKSHWFVLQFHPYGKNVIALAKRHK
        LL  AIK +   L+ +PYGK V++     K
Subjt:  LLERAIKSHWFVLQFHPYGKNVIALAKRHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATTTCTTGTCCAACACTAAAAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATAATAATAATAATAATAATTACTTAATCACCATTCTTAA
AAAACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTTCATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTC
TCTCCCTTATCACTTCATCACACCACTTCCTAGCAGCCTGCCTTCATCATCTCGGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGG
ACCATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGA
GTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAAC
TTCGAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATA
GGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGA
CTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGCAATTATGTTATCCAGACAGCCATGTCCGTTGCTAAGG
GAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATTGGCCAAACGTCATAAAAAGAAG
TCCAAATTACAAGAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATTTCTTGTCCAACACTAAAAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATAATAATAATAATAATAATTACTTAATCACCATTCTTAA
AAAACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTTCATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTC
TCTCCCTTATCACTTCATCACACCACTTCCTAGCAGCCTGCCTTCATCATCTCGGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGG
ACCATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGA
GTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAAC
TTCGAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATA
GGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGA
CTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGCAATTATGTTATCCAGACAGCCATGTCCGTTGCTAAGG
GAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATTGGCCAAACGTCATAAAAAGAAG
TCCAAATTACAAGAGTTTTAAAGTTGGGTGTATTATATATATATATATCTTCAAGGACATGTTATTATATATCATTTGTTTTATGTTATATTTGAAGGAATATGC
Protein sequenceShow/hide protein sequence
MENFLSNTKNSNANANGRINNNNNNNNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQW
TIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANI
GWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKK
SKLQEF