; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G024230 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G024230
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionpumilio homolog 12-like
Genome locationCicolChr02:7602258..7603695
RNA-Seq ExpressionCcUC02G024230
SyntenyCcUC02G024230
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]3.2e-9368.98Show/hide
Query:  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPL
        HR+VV LIS L Y CQQW I L M PHVLTLAKDF  GH+V++SCF +  P  NELI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVL+SPL
Subjt:  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPL

Query:  IQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVA
        IQD  +LS HPYGNYVIQFMIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + +I+EILE N  ++L+QICT++YGN+V+QT MS+A
Subjt:  IQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVA

Query:  KGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKSKLQEF
        KG+  KLL + IKSHWL LQ H YG+NVI S + RDKKK+KL ++
Subjt:  KGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKSKLQEF

KAG8497997.1 hypothetical protein CXB51_006726 [Gossypium anomalum]1.8e-4035.79Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYS
        + +H L++H   N  +  L +  +Q     LLL L+T    F+  C   LG R V KL+ R+  S +Q +I LS + P  +TL  +   GH ++  C  +
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYS

Query:  LSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKF
         S    + I   IA NC ++A +++GCC+L +C+ Y      + R+ +++ +I +A  LS H YGNYV+QF++ +   ++   +I +L+  +V+LSM+K+
Subjt:  LSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKF

Query:  GSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTK
        GSNVVEKC+ C       +I EI+    +   L++  D YGNYVIQ+A+ V+KG+ Y  L R I  H+  LQSH +GK V+   K
Subjt:  GSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTK

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]5.3e-8869.84Show/hide
Query:  MPLMED-DQAMLSNNNANANTNYSINNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLVACLHHLGHRVVV
        M LM+D D  M+SN++AN     S  N+N +L ++L++LTT  +H +I+HPLGN FLLHLLQ    H TFINHLLLSL T S  HFL   LH+LG+RVVV
Subjt:  MPLMED-DQAMLSNNNANANTNYSINNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLVACLHHLGHRVVV

Query:  KLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDAD
         LIS L Y CQQW IAL MSPHVLTLAKDFQGGH+V++SCF S SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVL++PLI+DA 
Subjt:  KLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDAD

Query:  NLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        +LS HPYGNYVIQFMIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  NLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]1.1e-6650.52Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        +H L+LHPLGN+ +  L +  H+ FI  LLLSLI     FL  CLH LG + VVKL+ RL+    Q   A+ +S H + LAK    GH VL +CF +LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VLV+PLIQ+A +LS H Y N+VIQF+I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKS
        VVEKCL C E     +I+EI+E  N+   +Q+ T++YGNYV Q A+SVAKGEAY LL R IKS    L+ HPYG++V+ +   R ++ S
Subjt:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKS

XP_022725062.1 putative pumilio homolog 8, chloroplastic [Durio zibethinus]2.4e-4033.45Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL
        +++H L++H   N  +  L ++ +Q     LL  L+ S   FL  C    G R V K + R++   Q+  +   + P  +TL  D   GH ++  CF   
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG
        S    +L++  I ++C ++A +++GCC+LQ+C++++     + R+ L++ +  +A  LS HPYGNYV+Q+++ +   ++   II  L   +V LSM+K+G
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG

Query:  SNVVEKCL-SCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKK
        SNVVEKCL    EG    +I EI+   ++   L++  D YGNYV+Q+A+ V+KG+ +  L   I+ H+ +L SH +GK V+  TK R  +
Subjt:  SNVVEKCL-SCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKK

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein1.7e-7170.16Show/hide
Query:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE
        +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVL+SPLIQD  +LS HPYGNYVIQFMIQLDG NIG RII EL +KFV LSMDK+GSNVVE
Subjt:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE

Query:  KCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKSKLQEF
        KCLSCCEG  + +I+EILE N  ++L+QICT++YGN+V+QT MS+AKG+  KLL + IKSHWL LQ H YG+NVI S + RDKKK+KL ++
Subjt:  KCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKSKLQEF

A0A1S3C139 putative pumilio homolog 8, chloroplastic2.6e-8869.84Show/hide
Query:  MPLMED-DQAMLSNNNANANTNYSINNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLVACLHHLGHRVVV
        M LM+D D  M+SN++AN     S  N+N +L ++L++LTT  +H +I+HPLGN FLLHLLQ    H TFINHLLLSL T S  HFL   LH+LG+RVVV
Subjt:  MPLMED-DQAMLSNNNANANTNYSINNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSHHFLVACLHHLGHRVVV

Query:  KLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDAD
         LIS L Y CQQW IAL MSPHVLTLAKDFQGGH+V++SCF S SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVL++PLI+DA 
Subjt:  KLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDAD

Query:  NLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        +LS HPYGNYVIQFMIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  NLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

A0A5D2ZYG0 PUM-HD domain-containing protein4.4e-4035.09Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYS
        + +H L++H + N  +  L +  +Q  +  LLL L+T    F+  C   LG R V KL+ R+  S +Q +I LS + P  +TL  +   GH ++  C  +
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYS

Query:  LSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKF
         S    + I   IA NC ++A +++GCC+L +C+ +      + R+ +++ +I +A  LS H YGNYV+QF++ +   ++   +I +L+  +V+LSM+K+
Subjt:  LSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKF

Query:  GSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTK
        GSNVVEKC+ C       +I EI+    +   L++  D YGNYVIQ+A+ V+KG+ Y  L R I  H+  L SH +GK V+   K
Subjt:  GSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTK

A0A6J1D5W5 pumilio homolog 12-like5.6e-6750.52Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        +H L+LHPLGN+ +  L +  H+ FI  LLLSLI     FL  CLH LG + VVKL+ RL+    Q   A+ +S H + LAK    GH VL +CF +LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VLV+PLIQ+A +LS H Y N+VIQF+I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKS
        VVEKCL C E     +I+EI+E  N+   +Q+ T++YGNYV Q A+SVAKGEAY LL R IKS    L+ HPYG++V+ +   R ++ S
Subjt:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKKS

A0A6P5XBS2 putative pumilio homolog 8, chloroplastic1.2e-4033.45Show/hide
Query:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL
        +++H L++H   N  +  L ++ +Q     LL  L+ S   FL  C    G R V K + R++   Q+  +   + P  +TL  D   GH ++  CF   
Subjt:  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG
        S    +L++  I ++C ++A +++GCC+LQ+C++++     + R+ L++ +  +A  LS HPYGNYV+Q+++ +   ++   II  L   +V LSM+K+G
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFG

Query:  SNVVEKCL-SCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKK
        SNVVEKCL    EG    +I EI+   ++   L++  D YGNYV+Q+A+ V+KG+ +  L   I+ H+ +L SH +GK V+  TK R  +
Subjt:  SNVVEKCL-SCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKK

SwissProt top hitse value%identityAlignment
Q1PFN9 Pumilio homolog 95.2e-3033.57Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLV-ACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS
        V  L + P GN  +  L   S +     L++S++TS+   L+  CL+  G RVV K+I  +    Q   +   + P  L L KD  G H V++SC  +L 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLV-ACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE LV+ + +++ +LS  P+GNYV+Q++I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEA-YKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR
        +V+EKCL         ++ E+L   N   LLQ   D Y NYVIQTA+SV KG    KL+ +  +  +  L S PY K +   T L+
Subjt:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEA-YKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR

Q9C9R6 Putative pumilio homolog 7, chloroplastic3.9e-3332.04Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL    +     ++L         +   L+  G RVV +L+  +    Q   + L++ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE L++ + +++  L+  P+GNY +QF+I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR
        +VE+CL  C      ++ E++   + +QLLQ   D Y N+VIQ A++  KG  +  L   I+ H + L+++PY K +     L+
Subjt:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR

Q9LDW3 Pumilio homolog 111.3e-2830.41Show/hide
Query:  INNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLA
        ++  N   + I+ K   N+V  L   P GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +T   Q   +  ++ P  L+L 
Subjt:  INNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLA

Query:  KDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRI
        ++  G H +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E LV  + +++  L+  P+GNY++Q++I+      G  +
Subjt:  KDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRI

Query:  INELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNV
        + EL+  +V L+  KFGS+VVEKCL         ++ E++   N   LLQ   D Y NYVIQ A+S  KG     L   ++  +  L+  PY K +
Subjt:  INELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNV

Q9LM20 Putative pumilio homolog 8, chloroplastic1.9e-3230.53Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  +    Q   +  ++ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE LV+ + +++  L+  PYGNY +QF+++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRD
        +VE+CL+ C      ++ E++   + + L+Q   D Y N+VIQ A++V KG  +  L   I+ H + L+++PY K +     L++
Subjt:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRD

Q9LVC3 Pumilio homolog 123.4e-2931.9Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFL-VACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS
        +  L++ P GN  +  LL+  ++     ++ S+       + ++C  H G R V K++       +   I  ++   ++ L K+  G H V++ C   L 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFL-VACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    LVS +  +A  LS  P+GNYV+Q++ +L      + I+ +L+  +  LSM K  S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVI
        NVVEKCL   +      I  I E  N  +L Q+  D YGNYVIQ A+  +KG  + LL   IK +   L+++PYGK V+
Subjt:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVI

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 81.4e-3330.53Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  +    Q   +  ++ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE LV+ + +++  L+  PYGNY +QF+++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRD
        +VE+CL+ C      ++ E++   + + L+Q   D Y N+VIQ A++V KG  +  L   I+ H + L+++PY K +     L++
Subjt:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRD

AT1G35730.1 pumilio 93.7e-3133.57Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLV-ACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS
        V  L + P GN  +  L   S +     L++S++TS+   L+  CL+  G RVV K+I  +    Q   +   + P  L L KD  G H V++SC  +L 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLV-ACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE LV+ + +++ +LS  P+GNYV+Q++I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEA-YKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR
        +V+EKCL         ++ E+L   N   LLQ   D Y NYVIQTA+SV KG    KL+ +  +  +  L S PY K +   T L+
Subjt:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEA-YKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR

AT1G78160.1 pumilio 72.8e-3432.04Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP
        V  L++ P GN  +  LL    +     ++L         +   L+  G RVV +L+  +    Q   + L++ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE L++ + +++  L+  P+GNY +QF+I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR
        +VE+CL  C      ++ E++   + +QLLQ   D Y N+VIQ A++  KG  +  L   I+ H + L+++PY K +     L+
Subjt:  VVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLR

AT4G08840.1 pumilio 119.2e-3030.41Show/hide
Query:  INNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLA
        ++  N   + I+ K   N+V  L   P GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +T   Q   +  ++ P  L+L 
Subjt:  INNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLA

Query:  KDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRI
        ++  G H +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E LV  + +++  L+  P+GNY++Q++I+      G  +
Subjt:  KDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRI

Query:  INELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNV
        + EL+  +V L+  KFGS+VVEKCL         ++ E++   N   LLQ   D Y NYVIQ A+S  KG     L   ++  +  L+  PY K +
Subjt:  INELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNV

AT5G56510.1 pumilio 122.4e-3031.9Show/hide
Query:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFL-VACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS
        +  L++ P GN  +  LL+  ++     ++ S+       + ++C  H G R V K++       +   I  ++   ++ L K+  G H V++ C   L 
Subjt:  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFL-VACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    LVS +  +A  LS  P+GNYV+Q++ +L      + I+ +L+  +  LSM K  S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVI
        NVVEKCL   +      I  I E  N  +L Q+  D YGNYVIQ A+  +KG  + LL   IK +   L+++PYGK V+
Subjt:  NVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTAATGGAAGATGATCAAGCAATGCTTTCCAATAATAATGCTAATGCTAATACCAATTATAGCATTAATAATAATAATAATTACTTAATCACCATTCTTAAAAA
ACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTACATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCT
CCCTTATCACTTCATCACACCACTTCCTAGTAGCCTGCCTTCATCATCTCGGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGGACC
ATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGAGTT
GATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTC
GAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATAGGA
TGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTA
TGTTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGTAATTATGTTATCCAAACAGCCATGTCAGTGGCTAAGGGAG
AAGCTTATAAGTTACTTGGAAGAGGCATTAAGAGCCATTGGCTTTATCTTCAATCTCATCCGTATGGAAAAAATGTGATTCCATCAACCAAATTACGTGATAAAAAGAAG
TCAAAATTACAAGAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTAATGGAAGATGATCAAGCAATGCTTTCCAATAATAATGCTAATGCTAATACCAATTATAGCATTAATAATAATAATAATTACTTAATCACCATTCTTAAAAA
ACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTACATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCT
CCCTTATCACTTCATCACACCACTTCCTAGTAGCCTGCCTTCATCATCTCGGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGGACC
ATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGAGTT
GATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTC
GAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATAGGA
TGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTA
TGTTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGTAATTATGTTATCCAAACAGCCATGTCAGTGGCTAAGGGAG
AAGCTTATAAGTTACTTGGAAGAGGCATTAAGAGCCATTGGCTTTATCTTCAATCTCATCCGTATGGAAAAAATGTGATTCCATCAACCAAATTACGTGATAAAAAGAAG
TCAAAATTACAAGAGTTTTAA
Protein sequenceShow/hide protein sequence
MPLMEDDQAMLSNNNANANTNYSINNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLVACLHHLGHRVVVKLISRLTYSCQQWT
IALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIG
WRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYVIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGEAYKLLGRGIKSHWLYLQSHPYGKNVIPSTKLRDKKK
SKLQEF