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CcUC02G024490 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G024490
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBRCT domain-containing protein
Genome locationCicolChr02:7929370..7929654
RNA-Seq ExpressionCcUC02G024490
SyntenyCcUC02G024490
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1699910.1 unnamed protein product [Brassica napus]1.0e-0470.27Show/hide
Query:  YSSILKIHEGIWSSGMILALGARGPEFDSRNAPNIIF
        + +++   +GIWSSGMILALGARGPEFDSRNAP  IF
Subjt:  YSSILKIHEGIWSSGMILALGARGPEFDSRNAPNIIF

GEW39561.1 26S proteasome non-ATPase regulatory subunit 4 homolog [Tanacetum cinerariifolium]7.8e-0553.45Show/hide
Query:  SILKIHEGIWSSGMILALGARGPEFDSRNAPNIIFLVSFVENAKISKAENIGNVDCFS
        S+ K   G+WSSG+ILALGARGPEFDSRNAP+  FL+S    + +S   N+   D  S
Subjt:  SILKIHEGIWSSGMILALGARGPEFDSRNAPNIIFLVSFVENAKISKAENIGNVDCFS

GEW71266.1 monodehydroascorbate reductase 4, peroxisomal [Tanacetum cinerariifolium]9.2e-0696.43Show/hide
Query:  KIHEGIWSSGMILALGARGPEFDSRNAP
        K HEGIWSSGMILALGARGPEFDSRNAP
Subjt:  KIHEGIWSSGMILALGARGPEFDSRNAP

KAF9665928.1 hypothetical protein SADUNF_Sadunf16G0175700 [Salix dunnii]4.6e-0583.87Show/hide
Query:  ILKIHE-GIWSSGMILALGARGPEFDSRNAP
        ++K+HE GIWS+GMILALGARGPEFDSRNAP
Subjt:  ILKIHE-GIWSSGMILALGARGPEFDSRNAP

VDC97964.1 unnamed protein product [Brassica oleracea]4.6e-0579.41Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVE
        GIWSSGMILALGARGPEFDSRNAP   FLV+ ++
Subjt:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVE

TrEMBL top hitse value%identityAlignment
A0A061DQC8 Uncharacterized protein1.4e-0471.43Show/hide
Query:  SILKIHEGIWSSGMILALGARGPEFDSRNAPNIIF
        S  +  +G+WSSGMILALGARGPEFDSRNAP   F
Subjt:  SILKIHEGIWSSGMILALGARGPEFDSRNAPNIIF

A0A0D3BIR0 Uncharacterized protein6.4e-0576.47Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVE
        GIWSSGMIL LGARGPEFDSRNAP   FLV+ ++
Subjt:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVE

A0A2C9VIU6 Uncharacterized protein (Fragment)2.2e-0589.29Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPNIIF
        GIWSSGMILALGARGPEFDSRNAP ++F
Subjt:  GIWSSGMILALGARGPEFDSRNAPNIIF

A0A2U1NF93 Tetratricopeptide-like helical domain, DYW domain protein4.9e-0565.85Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVENAKISKA
        G+WSSGMILA GARGPEFDSRNAP  +   +F+  A IS A
Subjt:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVENAKISKA

A0A3P6BFV3 Uncharacterized protein2.2e-0579.41Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVE
        GIWSSGMILALGARGPEFDSRNAP   FLV+ ++
Subjt:  GIWSSGMILALGARGPEFDSRNAPNIIFLVSFVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGTTGCCGATAACTCCTGCTGCAGTTCTTCTGTAAGTACAAGTTGGGGAAAGGGATTTTTTTTAAATATAGTAGGATATTCTTCAATATTAAAGATACACGA
GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCAAATATTATCTTTTTGGTTTCGTTTGTAGAAAATGCTA
AAATTTCAAAAGCGGAGAACATTGGAAACGTTGATTGTTTTAGCAAAGAAGGGAATTTGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGTTGCCGATAACTCCTGCTGCAGTTCTTCTGTAAGTACAAGTTGGGGAAAGGGATTTTTTTTAAATATAGTAGGATATTCTTCAATATTAAAGATACACGA
GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCAAATATTATCTTTTTGGTTTCGTTTGTAGAAAATGCTA
AAATTTCAAAAGCGGAGAACATTGGAAACGTTGATTGTTTTAGCAAAGAAGGGAATTTGGTCTAG
Protein sequenceShow/hide protein sequence
MKNVADNSCCSSSVSTSWGKGFFLNIVGYSSILKIHEGIWSSGMILALGARGPEFDSRNAPNIIFLVSFVENAKISKAENIGNVDCFSKEGNLV