; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G025140 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G025140
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionShikimate dehydrogenase
Genome locationCicolChr02:9625763..9627228
RNA-Seq ExpressionCcUC02G025140
SyntenyCcUC02G025140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT11648.1 Os10g0514550 [Oryza sativa Japonica Group]3.6e-1539.39Show/hide
Query:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN
        QIL P PNGI  I   PV  + S S     +NLS +NSIG SH+   L ISA  K TV   G    P  + SS   CG A  PGGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS
        F+ SSSV+ S+  +  ++  IS +S  W+ G+ T  A+ HC           RNS   L IS S   R   SSG             +S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS

KAB8081334.1 hypothetical protein EE612_002449 [Oryza sativa]7.2e-0845.16Show/hide
Query:  GQILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYG
        GQILLP PNGI LIS  PVR   + S  S  +NLS  NS G  HT    A SA  K T + +G    PS+  SS   C    C GGCR   S  +A RY 
Subjt:  GQILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYG

Query:  NFFTSSSVMCSFD-DVPSIISSIS
            SSS  CS   D   +ISS S
Subjt:  NFFTSSSVMCSFD-DVPSIISSIS

KAB8113312.1 hypothetical protein EE612_052276 [Oryza sativa]1.1e-1338.38Show/hide
Query:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN
        QIL P PNGI  I   PV  + S S     +NLS +N IG SH+   L ISA  K TV   G    P  + SS   CG A  PGGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS
         + SSSV+ S+  +  ++  IS +S  W+ G+ T  A+ HC           RNS   L IS S   R   SSG             +S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS

KAG8649971.1 hypothetical protein MANES_08G163522v8, partial [Manihot esculenta]3.6e-1549.62Show/hide
Query:  GQILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYG
        GQILLP P GI  IS  PV     S +S   KNLS LN+IGSSHT     ISA  K  V   GT N PS T SS+T CG   CPGGCRL  S ITAFRYG
Subjt:  GQILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYG

Query:  NFFTSSSVMCSFDDVPSIISS-----ISLYSFS
               ++C +  + S+ S+     IS+ SFS
Subjt:  NFFTSSSVMCSFDDVPSIISS-----ISLYSFS

TVU31354.1 hypothetical protein EJB05_23037, partial [Eragrostis curvula]8.5e-0949.02Show/hide
Query:  PPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFFTS
        P PNGI LIS  PV    S S     +N S  NS+G SHT   + +SA  K TVV  G    P ++ SS   CGR  CPGG R + SI TAFRYG   TS
Subjt:  PPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFFTS

Query:  SS
        SS
Subjt:  SS

TrEMBL top hitse value%identityAlignment
A0A0E0EZV5 Uncharacterized protein2.5e-1438.27Show/hide
Query:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN
        QILLP PNGI   S  PV  +++ S S   +N S +NSIG SH+   L ISA  K TV   G    P  + SS   CG     GGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRFSSGKCRFINGKMCSDFVSDSISLFLCS
           SSSV+ S+     ++  IS +S  W+ G+ T  A+ HC          LRNS     I+ SSS R  S     ++G++     S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRFSSGKCRFINGKMCSDFVSDSISLFLCS

A0A0P0XW62 Os10g0514550 protein1.7e-1539.39Show/hide
Query:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN
        QIL P PNGI  I   PV  + S S     +NLS +NSIG SH+   L ISA  K TV   G    P  + SS   CG A  PGGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS
        F+ SSSV+ S+  +  ++  IS +S  W+ G+ T  A+ HC           RNS   L IS S   R   SSG             +S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS

A0A0P0XWM5 Os10g0514425 protein7.8e-0844.17Show/hide
Query:  ILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNF
        IL P PNGI  I   PV  + S S     +NLS +N IG SH+   L ISA  K TV   G    P  + SS   CG A  P GC  + S +TAFRYG F
Subjt:  ILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNF

Query:  FTSSSVMCSFDDVP-SIISS
        + SSSV+ S+  +  ++ISS
Subjt:  FTSSSVMCSFDDVP-SIISS

A0A103XV92 Uncharacterized protein4.6e-0852.81Show/hide
Query:  SSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFFTSSSVMCSFDDVP
        SSF+KNLS LNSIGSSHT     ISA  K  V  SG    PS +TS VT CG    P GC L  S  TAFRYG F  SSS +      P
Subjt:  SSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFFTSSSVMCSFDDVP

A0A5J9V752 Uncharacterized protein (Fragment)4.1e-0949.02Show/hide
Query:  PPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFFTS
        P PNGI LIS  PV    S S     +N S  NS+G SHT   + +SA  K TVV  G    P ++ SS   CGR  CPGG R + SI TAFRYG   TS
Subjt:  PPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFFTS

Query:  SS
        SS
Subjt:  SS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGGCAGATTCTTCTCCCTCCCCCAAATGGCATAAATCTAATCTCCTTCTTCCCCGTCAGAATCTCCACTTCATCTTCCTCTTCCTCCTTCCTCAAGAAT
CTCTCCGCCCTGAACTCCATCGGCTCTTCCCACACTTCCCCATTCCTCGCCATCTCCGCCGCCGCAAAATGCACCGTCGTTTTCTCCGGCACCACGAATTTGCCG
TCCAACACCACCTCCTCTGTCACCAAATGTGGTAGAGCCACATGCCCTGGCGGATGCCGCCTCAAGGTTTCCATTATCACCGCCTTCAGGTACGGCAACTTCTTC
ACATCCTCTTCTGTTATGTGTTCTTTCGATGATGTTCCATCGATCATCTCATCCATCTCTCTGTATAGCTTCTCTTGGATTTCTGGATATTTTACGATGTTTGCC
ATTGCCCATTGCATCACCACTACTACGGAATGGACGATTCCGTTGAGAAATTCCGCGCATAGGCTGATGATTTCACCTTCTTCAAGCTTTCGATTCTCTTCCGGT
AAGTGTAGGTTTATCAATGGCAAAATGTGTTCTGATTTTGTTTCTGATTCTATTTCGTTGTTCCTTTGTTCGATTTCACGTTGTCTTTCGTTGAATCGAGCTTCA
ATTAGAGGAATTATTGCAGTTTCGACTTCGTTTCGAAGTGTTGTGAGTTCATTCCAGAGATTCGGAGGAATTTCCCCAATTTTAATGGATATTGATTCAGTTTGT
TTTGGCTGCTGGAATACAATAGAACGCGATGGAGGAGATCGGCTAGGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGGCAGATTCTTCTCCCTCCCCCAAATGGCATAAATCTAATCTCCTTCTTCCCCGTCAGAATCTCCACTTCATCTTCCTCTTCCTCCTTCCTCAAGAAT
CTCTCCGCCCTGAACTCCATCGGCTCTTCCCACACTTCCCCATTCCTCGCCATCTCCGCCGCCGCAAAATGCACCGTCGTTTTCTCCGGCACCACGAATTTGCCG
TCCAACACCACCTCCTCTGTCACCAAATGTGGTAGAGCCACATGCCCTGGCGGATGCCGCCTCAAGGTTTCCATTATCACCGCCTTCAGGTACGGCAACTTCTTC
ACATCCTCTTCTGTTATGTGTTCTTTCGATGATGTTCCATCGATCATCTCATCCATCTCTCTGTATAGCTTCTCTTGGATTTCTGGATATTTTACGATGTTTGCC
ATTGCCCATTGCATCACCACTACTACGGAATGGACGATTCCGTTGAGAAATTCCGCGCATAGGCTGATGATTTCACCTTCTTCAAGCTTTCGATTCTCTTCCGGT
AAGTGTAGGTTTATCAATGGCAAAATGTGTTCTGATTTTGTTTCTGATTCTATTTCGTTGTTCCTTTGTTCGATTTCACGTTGTCTTTCGTTGAATCGAGCTTCA
ATTAGAGGAATTATTGCAGTTTCGACTTCGTTTCGAAGTGTTGTGAGTTCATTCCAGAGATTCGGAGGAATTTCCCCAATTTTAATGGATATTGATTCAGTTTGT
TTTGGCTGCTGGAATACAATAGAACGCGATGGAGGAGATCGGCTAGGGCTTTGA
Protein sequenceShow/hide protein sequence
MLGQILLPPPNGINLISFFPVRISTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNLPSNTTSSVTKCGRATCPGGCRLKVSIITAFRYGNFF
TSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRFSSGKCRFINGKMCSDFVSDSISLFLCSISRCLSLNRAS
IRGIIAVSTSFRSVVSSFQRFGGISPILMDIDSVCFGCWNTIERDGGDRLGL