| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 2.0e-259 | 88.87 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK+V+IAK SA+F PSYP SNRH QCIKA+KEHVDTPSSPTA+PWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRG+T KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEE+L H+EVVRLSKKIKVGLA+EE KT RLKERL CEPSEEQLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
ERVRQVGLVALEKLKKAAK RKMEAMLLKH
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 1.5e-267 | 91.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTA+PWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR +TLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLA+EE KT RLKERLGCEPSE+QLAISLKISRAELRSR+MECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
RERVRQVGLVALEKLKKAAKTRKMEAML+KH
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 1.5e-259 | 89.06 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQ+QVSPTK+V+IAKSSANF PS+P SNRH+QCIKA+KEHVDTPSSPT +PWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RGRT KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEELLSHAEVVRLSKKIKVGLA+EERKT RLKERLGCEPSE+QLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 1.2e-259 | 88.87 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK+V+IAK SA+F PSYP SNRH QCIKA+KEHVDTPSSPTA+PWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRG+T KKVPVTCSGVSARQRRMSSKRKIQSKH F+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEE+L H+EVVRLSKKIKVGLA+EE KT RLKERL CEPSEEQLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
ERVRQVGLVALEKLKKAAK RKMEAMLLKH
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 3.3e-270 | 92.66 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY NDHRLGQTQVSPTK+V+IAKSSANF PSYP SNRHSQCIKA+KEHVDTPSSPTA+PWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRG+T KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLA+EERKT RLKERLGCEPSE+QLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 1.3e-259 | 89.64 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVS +K+V+IAKSSANF P YP SNRHS QCIKA+KEHV+TPSSP A+PW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTDTP+ +TLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGL +EERKT RLK+RLGCEPSE+QLAISLKISRAELRSR+ME SLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 7.5e-268 | 91.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTA+PWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR +TLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLA+EE KT RLKERLGCEPSE+QLAISLKISRAELRSR+MECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
RERVRQVGLVALEKLKKAAKTRKMEAML+KH
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 7.5e-268 | 91.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTA+PWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTADPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR +TLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLA+EE KT RLKERLGCEPSE+QLAISLKISRAELRSR+MECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
RERVRQVGLVALEKLKKAAKTRKMEAML+KH
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 7.5e-260 | 89.06 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQ+QVSPTK+V+IAKSSANF PS+P SNRH+QCIKA+KEHVDTPSSPT +PWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RGRT KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEELLSHAEVVRLSKKIKVGLA+EERKT RLKERLGCEPSE+QLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 6.4e-259 | 88.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK V+IAK SA+F PSY SNRH QCIKA+KEHVDTPSSPTA+PWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRG+T KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEE+L H+EVVRLSKKIKVGLA+EE KT RLKERL C+PSEEQLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
ERVRQVGLVALEKLKKAAK RKMEAMLLKH
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O24629 RNA polymerase sigma factor sigA | 1.1e-188 | 66.91 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
++GYVKG++SE++LSH EVVRLSKKIK GL +++ K SRLK+RLGCEPS+EQLA+SLKISRAEL++ +MEC LAREKLA
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
Query: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
MSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+D
Subjt: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
RIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+I
Subjt: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
Query: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH
SKRIGLSRERVRQVGLVALEKLK AA+ RKMEAM+LK+
Subjt: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| O33662 RNA polymerase sigma factor SigA | 5.2e-40 | 34.53 | Show/hide |
Query: AIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEP---SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQG
A+EE K +T SN+ +N + LKE +G P +EE+ +++ + +L A+++LA +N+RLV+SIA+RY G + DL+Q
Subjt: AIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEP---SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQG
Query: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSL
G +GL++ ++KFD SKGFK STY WWIRQ ++RA+ + +RT+R+P H+ E + L+R + LQE G P+ ++IAE ++M+ KV+ + + SL
Subjt: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSL
Query: DREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ G ++H +I D +E NP T +L+ +++E+++ TL DRE ++RL GLD+ + T E++ K ++RER+RQ+ AL KL+
Subjt: DREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKM
++++++
Subjt: AAKTRKM
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| P0A4I9 RNA polymerase sigma factor SigA | 3.7e-38 | 35.09 | Show/hide |
Query: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
+EE+ ++L + ++ A+++LA +N+RLV+SIA+RY G + DL+Q G +GL++ ++KFD SKGFK STY WWIRQ ++RA+ + +RT
Subjt: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
Query: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
+R+P H+ E + L+R + LQE G P+ ++IAE ++M+ KV+ + + SL+ G ++H +I D +E NP T +L+ +
Subjt: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
Query: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
++E+++ TL DRE ++RL GLD+ + T E++ K ++RER+RQ+ AL KL++ ++++ +
Subjt: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
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| P0A4J0 RNA polymerase sigma factor SigA | 3.7e-38 | 35.09 | Show/hide |
Query: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
+EE+ ++L + ++ A+++LA +N+RLV+SIA+RY G + DL+Q G +GL++ ++KFD SKGFK STY WWIRQ ++RA+ + +RT
Subjt: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
Query: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
+R+P H+ E + L+R + LQE G P+ ++IAE ++M+ KV+ + + SL+ G ++H +I D +E NP T +L+ +
Subjt: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
Query: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
++E+++ TL DRE ++RL GLD+ + T E++ K ++RER+RQ+ AL KL++ ++++ +
Subjt: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
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| Q0J7T6 RNA polymerase sigma factor sigA | 2.8e-126 | 48.82 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNR---------------HSQCIKALKEHVD-----
M AT A+IGL A RLL++S F L + LG + +F P P + + +Q ++AL+ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNR---------------HSQCIKALKEHVD-----
Query: TPSSPTADPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDTPRGRTLK-KVPVTCSGVSARQRRMSSKRKIQSKHAFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRMS +R+ ++K+
Subjt: TPSSPTADPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDTPRGRTLK-KVPVTCSGVSARQRRMSSKRKIQSKHAFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISR
+SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ +++++ S+LKE+LG EPS +QLA SLKIS
Subjt: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISR
Query: AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL
ELRSR+ E LARE L MSN+RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL
Subjt: AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL
Query: IRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDRERE
IR AK L+++GI P+++ IA SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN+L+N TL +RER+
Subjt: IRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDRERE
Query: IIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAML
IIRLYHG+ +C TWE+IS++ GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: IIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.9e-37 | 32.98 | Show/hide |
Query: QPKISKQLRPTISPELLQNRLKGYVK---GLLSEELLSHAEVVRL-SKKIKVGLAIEE-RKTSSITPFL----KHSSNNDIMNF----TLTSRLKERLGC
QP +S +R T E R KG K G+ S + S + RL ++++ + R T+S + L +H + I + L + L ER G
Subjt: QPKISKQLRPTISPELLQNRLKGYVK---GLLSEELLSHAEVVRL-SKKIKVGLAIEE-RKTSSITPFL----KHSSNNDIMNF----TLTSRLKERLGC
Query: EPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENS
+P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + S
Subjt: EPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENS
Query: RTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL--
R +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD P T IL
Subjt: RTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL--
Query: ---KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
+ +++++++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: ---KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
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| AT1G64860.1 sigma factor A | 8.1e-190 | 66.91 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
++GYVKG++SE++LSH EVVRLSKKIK GL +++ K SRLK+RLGCEPS+EQLA+SLKISRAEL++ +MEC LAREKLA
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
Query: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
MSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+D
Subjt: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
RIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+I
Subjt: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
Query: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH
SKRIGLSRERVRQVGLVALEKLK AA+ RKMEAM+LK+
Subjt: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 3.3e-175 | 65.67 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTADPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGRTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
++GYVKG++SE++LSH EVVRLSKKIK GL +++ K SRLK+RLGCEPS+EQLA+SLKISRAEL++ +MEC LAREKLA
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLAIEERKTSSITPFLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
Query: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
MSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+D
Subjt: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
RIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+I
Subjt: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
Query: SKRI
SKRI
Subjt: SKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.8e-33 | 32.49 | Show/hide |
Query: SRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQG
++L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G DL+Q G +GL++ +EKF G + +TY YWWIRQ
Subjt: SRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQG
Query: VSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWH
+ +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+ S+ + + + T D+ +E P
Subjt: VSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWH
Query: GTDTWILKAEVNELINITLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEA
+++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL +LK+ + + A
Subjt: GTDTWILKAEVNELINITLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 1.3e-33 | 37.31 | Show/hide |
Query: ERLGCEPSE-EQLAISLKISRAELRSRVMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ
E LG E E +++ L R + + E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q
Subjt: ERLGCEPSE-EQLAISLKISRAELRSRVMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ
Query: GVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW
+ RA+ SR ++LP + E + A L K PS + IAE LN++ V+ A E SLDR A + G I E P
Subjt: GVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW
Query: HGTDTWILKAEVNELINITLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+K E+ +L+ +L RE ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: HGTDTWILKAEVNELINITLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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