; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G026210 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G026210
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBeta-galactosidase
Genome locationCicolChr02:11877257..11877634
RNA-Seq ExpressionCcUC02G026210
SyntenyCcUC02G026210
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005773 - vacuole (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR008979 - Galactose-binding-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062481.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]2.1e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT+VDTN TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK +LLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

TYK27403.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]2.1e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT+VDTN TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK +LLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

XP_008465565.1 PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo]2.1e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT+VDTN TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK +LLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

XP_011648551.2 LOW QUALITY PROTEIN: beta-galactosidase 15 [Cucumis sativus]8.1e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT VDTN TSS +NVTLQVNTK HVLHAFVN+RYI S+WGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK ILLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

XP_031741738.1 beta-galactosidase 7-like [Cucumis sativus]1.6e-5086.32Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMTNVDT+ TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK ILLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

TrEMBL top hitse value%identityAlignment
A0A0A0M006 Beta-galactosidase3.9e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT VDTN TSS +NVTLQVNTK HVLHAFVN+RYI S+WGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK ILLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

A0A1S3CP60 beta-galactosidase 7-like1.0e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT+VDTN TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK +LLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

A0A5A7UJD2 Beta-galactosidase3.3e-4984.62Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT VDT+ TSS +NVTLQVNTK HVLHAFVN+RYI SQW SNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK ILLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

A0A5A7V9Y9 Beta-galactosidase1.0e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT+VDTN TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK +LLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

A0A5D3DUP4 Beta-galactosidase1.0e-5085.47Show/hide
Query:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS
        SMFVKEQNEKENAQLSW WAPEPM+DTLQGNGKF ANLLLEQK VTVDFSDY WYMT+VDTN TSS +NVTLQVNTK HVLHAFVN+RYI SQWGSNGQS
Subjt:  SMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQS

Query:  FVFEKSILLKSGANSWT
        FVFEK +LLKSG N+ T
Subjt:  FVFEKSILLKSGANSWT

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase2.6e-1439.66Show/hide
Query:  VKEQNEKENAQLSWVWAPE--PMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNV--DTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQ-WGSNG
        + E +  E  +L W W PE    +  L+G+G  +A  L++QK VT D SDYLWYMT V  D        N++L+V++ +HVLHA+VN +Y+ +Q    N 
Subjt:  VKEQNEKENAQLSWVWAPE--PMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNV--DTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQ-WGSNG

Query:  QSFVFEKSILLKSGAN
          + FEK + L  G N
Subjt:  QSFVFEKSILLKSGAN

Q7G3T8 Beta-galactosidase 135.0e-1038.66Show/hide
Query:  SMFVKEQN--EKENAQLSWVWAPEPMRDTL-QGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSN
        ++ VK+ N  EKE   L W W  E +   +    G +  N LLEQ   + D SDYLWY T++D    +S    TL VNT  H L+AFVN   +      N
Subjt:  SMFVKEQN--EKENAQLSWVWAPEPMRDTL-QGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSN

Query:  GQSFVF--EKSILLKSGAN
        G  FVF  E ++ L  G N
Subjt:  GQSFVF--EKSILLKSGAN

Q8RUV9 Beta-galactosidase 12.9e-1038.66Show/hide
Query:  SMFVKEQN--EKENAQLSWVWAPEPMRDTL-QGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSN
        S+ VK+ N  E+E   L W W PE +   +    G F  N LLEQ   + D SDYLWY T+++     S     L VNT  H L+AFVN + I     ++
Subjt:  SMFVKEQN--EKENAQLSWVWAPEPMRDTL-QGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSN

Query:  GQSFVF--EKSILLKSGAN
        G  FVF  E  + L  G N
Subjt:  GQSFVF--EKSILLKSGAN

Q9C6W4 Beta-galactosidase 153.9e-1540.83Show/hide
Query:  SMFVKEQNEKEN--AQLSWVWAPEPMRDT-LQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS--PENVTLQVNTKSHVLHAFVNRRYIRSQWG
        S+ VK+ NE EN  + L W W PE +    L+G G+     L +QK V+ D SDYLWYMT V+         +N++L++N+ +HVLHAFVN ++I +   
Subjt:  SMFVKEQNEKEN--AQLSWVWAPEPMRDT-LQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS--PENVTLQVNTKSHVLHAFVNRRYIRSQWG

Query:  SNGQ-SFVFEKSILLKSGAN
         NG+  +VFE+      GAN
Subjt:  SNGQ-SFVFEKSILLKSGAN

Q9SCV5 Beta-galactosidase 79.7e-1437.04Show/hide
Query:  VKEQNEKENAQLSWVWAPE-PMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMT--NVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQ-
        +  ++  +  +L W W PE   +  L+G+G  +A  L++QK VT D SDYLWYMT  ++D        N+TL+V++ +HVLHA+VN +Y+ +Q+  +G+ 
Subjt:  VKEQNEKENAQLSWVWAPE-PMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMT--NVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQ-

Query:  SFVFEKSI
         + FE+ +
Subjt:  SFVFEKSI

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 152.8e-1640.83Show/hide
Query:  SMFVKEQNEKEN--AQLSWVWAPEPMRDT-LQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS--PENVTLQVNTKSHVLHAFVNRRYIRSQWG
        S+ VK+ NE EN  + L W W PE +    L+G G+     L +QK V+ D SDYLWYMT V+         +N++L++N+ +HVLHAFVN ++I +   
Subjt:  SMFVKEQNEKEN--AQLSWVWAPEPMRDT-LQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS--PENVTLQVNTKSHVLHAFVNRRYIRSQWG

Query:  SNGQ-SFVFEKSILLKSGAN
         NG+  +VFE+      GAN
Subjt:  SNGQ-SFVFEKSILLKSGAN

AT1G45130.1 beta-galactosidase 51.5e-0938.71Show/hide
Query:  TLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS----PENVTLQVNTKSHVLHAFVNRRYIRSQWGS-NGQSFVFEKSILLKSGAN
        T    G   A  LLEQ  VT D +DYLWY T+VD  A+ S     +  TL V++  H +H FVN  +  S +G+   + F F   + L+ GAN
Subjt:  TLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS----PENVTLQVNTKSHVLHAFVNRRYIRSQWGS-NGQSFVFEKSILLKSGAN

AT4G36360.1 beta-galactosidase 37.4e-0938.71Show/hide
Query:  TLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS----PENVTLQVNTKSHVLHAFVNRRYIRSQWGS-NGQSFVFEKSILLKSGAN
        +L  +  F  + LLEQ  VT D SDYLWYMT+VD   + S     E  TL + +  H +H FVN +   S +G+   + F ++  I L SG N
Subjt:  TLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS----PENVTLQVNTKSHVLHAFVNRRYIRSQWGS-NGQSFVFEKSILLKSGAN

AT4G36360.2 beta-galactosidase 37.4e-0938.71Show/hide
Query:  TLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS----PENVTLQVNTKSHVLHAFVNRRYIRSQWGS-NGQSFVFEKSILLKSGAN
        +L  +  F  + LLEQ  VT D SDYLWYMT+VD   + S     E  TL + +  H +H FVN +   S +G+   + F ++  I L SG N
Subjt:  TLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSS----PENVTLQVNTKSHVLHAFVNRRYIRSQWGS-NGQSFVFEKSILLKSGAN

AT5G20710.1 beta-galactosidase 76.9e-1537.04Show/hide
Query:  VKEQNEKENAQLSWVWAPE-PMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMT--NVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQ-
        +  ++  +  +L W W PE   +  L+G+G  +A  L++QK VT D SDYLWYMT  ++D        N+TL+V++ +HVLHA+VN +Y+ +Q+  +G+ 
Subjt:  VKEQNEKENAQLSWVWAPE-PMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMT--NVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQ-

Query:  SFVFEKSI
         + FE+ +
Subjt:  SFVFEKSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATGTTCGTGAAAGAGCAAAATGAGAAGGAAAATGCACAACTCTCGTGGGTTTGGGCTCCGGAGCCAATGAGAGACACTCTACAAGGAAATGGCAAATTTATGGC
AAACCTTCTTTTGGAACAAAAAGGAGTCACCGTTGATTTCAGTGACTACTTGTGGTACATGACAAATGTTGACACCAATGCAACATCTTCACCTGAAAATGTGACTCTCC
AAGTGAATACAAAGAGTCATGTGCTTCATGCTTTCGTTAATAGAAGGTACATTAGGTCGCAATGGGGGAGTAATGGCCAGAGTTTTGTGTTTGAGAAGTCCATCCTATTA
AAATCGGGAGCCAACAGTTGGACTGAAGAACTACGATGCATTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATGTTCGTGAAAGAGCAAAATGAGAAGGAAAATGCACAACTCTCGTGGGTTTGGGCTCCGGAGCCAATGAGAGACACTCTACAAGGAAATGGCAAATTTATGGC
AAACCTTCTTTTGGAACAAAAAGGAGTCACCGTTGATTTCAGTGACTACTTGTGGTACATGACAAATGTTGACACCAATGCAACATCTTCACCTGAAAATGTGACTCTCC
AAGTGAATACAAAGAGTCATGTGCTTCATGCTTTCGTTAATAGAAGGTACATTAGGTCGCAATGGGGGAGTAATGGCCAGAGTTTTGTGTTTGAGAAGTCCATCCTATTA
AAATCGGGAGCCAACAGTTGGACTGAAGAACTACGATGCATTTTATGA
Protein sequenceShow/hide protein sequence
MSMFVKEQNEKENAQLSWVWAPEPMRDTLQGNGKFMANLLLEQKGVTVDFSDYLWYMTNVDTNATSSPENVTLQVNTKSHVLHAFVNRRYIRSQWGSNGQSFVFEKSILL
KSGANSWTEELRCIL