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CcUC02G028080 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G028080
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationCicolChr02:21399028..21401182
RNA-Seq ExpressionCcUC02G028080
SyntenyCcUC02G028080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1246.24Show/hide
Query:  VVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        + ++ L+C++LA +LLIQ  A+      +  +A P       + + +  PG+AE P IRRLGKHH   S+ G GV+IGGL TAVFA VFCYIR
Subjt:  VVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

KAG7034949.1 hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2774.74Show/hide
Query:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        AVVR GL+C++L GM L QLTAA+ AE PTVATAMPFFG   GKE E+  QPGVA GP IRRLGKHH HTS+ G GVL+GGLATAVFAVVFCYIR
Subjt:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

KGN46704.1 hypothetical protein Csa_020980 [Cucumis sativus]9.5e-2771.88Show/hide
Query:  MAAVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        MAAVVRL LM ++LAGM  IQLTAANV E P V TA+ FFG+  GKEE ++ P VAEGP IRRLGKHHFHTS+ G  VLIG LATAVFA+VFCYIR
Subjt:  MAAVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

XP_022947872.1 uncharacterized protein LOC111451632 [Cucurbita moschata]2.5e-2774.74Show/hide
Query:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        AVVR GL+C++L GM L QLTAA+ AE PTVATAMPFFG   GKE E+  QPGVA GP IRRLGKHH HTS+ G GVL+GGLATAVFAVVFCYIR
Subjt:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

XP_023532519.1 uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]1.5e-2773.68Show/hide
Query:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        AVVR GL+C++L GM L QLTAA+ AE PTVATAMPFFGA  G E E+  Q GVA GP IRRLGKHH HTS+ G GVL+GGLATAVFAVVFCYIR
Subjt:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

TrEMBL top hitse value%identityAlignment
A0A0A0K3N0 Uncharacterized protein2.5e-0947.19Show/hide
Query:  LMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPG-VAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        L C+++  + LIQ    ++A      T +P   A    E+  R+   VAE P IRRLGKHH   S+ G GV+IGGL TAVFA VFCYIR
Subjt:  LMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPG-VAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

A0A0A0KCY0 Uncharacterized protein4.6e-2771.88Show/hide
Query:  MAAVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        MAAVVRL LM ++LAGM  IQLTAANV E P V TA+ FFG+  GKEE ++ P VAEGP IRRLGKHHFHTS+ G  VLIG LATAVFA+VFCYIR
Subjt:  MAAVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

A0A2N9IXN3 Uncharacterized protein2.5e-0940.52Show/hide
Query:  RLGLMCMLLAGMLLIQLTA-------------------------ANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLI
        RLGL C++LA +L++Q  A                         A VA+ P  + A           E      VAE P IRR+GKHH   S+ G GV+I
Subjt:  RLGLMCMLLAGMLLIQLTA-------------------------ANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLI

Query:  GGLATAVFAVVFCYIR
        GGLATA+FAVVFCYIR
Subjt:  GGLATAVFAVVFCYIR

A0A6J1G7L7 uncharacterized protein LOC1114516321.2e-2774.74Show/hide
Query:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        AVVR GL+C++L GM L QLTAA+ AE PTVATAMPFFG   GKE E+  QPGVA GP IRRLGKHH HTS+ G GVL+GGLATAVFAVVFCYIR
Subjt:  AVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEI-RQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

A5BAN6 Uncharacterized protein2.5e-0948.35Show/hide
Query:  RLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR
        RL L+C+LLA +L++Q  A      P  +        + G   E  +  VAE P  RRLGKHH   SI G GV+IGGLATA+FA VFCYIR
Subjt:  RLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein2.2e-0534.95Show/hide
Query:  LMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHH--FHTSIPGDGVLIGGLATAVFAVVFCYIRS---RDPCVD
        ++C LL   +     A++ AE P    A    G +    EE   P V+      R G HH     S+ G GV++GGLAT    VVFCYIR+     P  D
Subjt:  LMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHH--FHTSIPGDGVLIGGLATAVFAVVFCYIRS---RDPCVD

Query:  DRE
        ++E
Subjt:  DRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGTGGTTCGACTTGGTTTGATGTGTATGCTTCTTGCTGGGATGTTGTTGATTCAACTCACGGCTGCGAATGTCGCGGAGGTGCCAACAGTAGCCACGGCGAT
GCCGTTCTTCGGGGCTAACTTTGGAAAGGAGGAGGAGATTCGGCAGCCGGGAGTGGCTGAAGGTCCTACAATCAGACGGCTGGGAAAGCATCATTTTCACACCTCCATCC
CCGGCGATGGGGTGCTCATCGGCGGCCTTGCTACTGCTGTTTTTGCTGTTGTGTTTTGCTACATAAGGAGTCGAGATCCATGCGTAGACGACCGCGAACAGTGGAGAACT
CACCAACAGCTGGGCATGACCTTGCGGTTGCCAGACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGTGGTTCGACTTGGTTTGATGTGTATGCTTCTTGCTGGGATGTTGTTGATTCAACTCACGGCTGCGAATGTCGCGGAGGTGCCAACAGTAGCCACGGCGAT
GCCGTTCTTCGGGGCTAACTTTGGAAAGGAGGAGGAGATTCGGCAGCCGGGAGTGGCTGAAGGTCCTACAATCAGACGGCTGGGAAAGCATCATTTTCACACCTCCATCC
CCGGCGATGGGGTGCTCATCGGCGGCCTTGCTACTGCTGTTTTTGCTGTTGTGTTTTGCTACATAAGGAGTCGAGATCCATGCGTAGACGACCGCGAACAGTGGAGAACT
CACCAACAGCTGGGCATGACCTTGCGGTTGCCAGACAACTAG
Protein sequenceShow/hide protein sequence
MAAVVRLGLMCMLLAGMLLIQLTAANVAEVPTVATAMPFFGANFGKEEEIRQPGVAEGPTIRRLGKHHFHTSIPGDGVLIGGLATAVFAVVFCYIRSRDPCVDDREQWRT
HQQLGMTLRLPDN