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CcUC02G028100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G028100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRibosomal protein L2
Genome locationCicolChr02:21415686..21419828
RNA-Seq ExpressionCcUC02G028100
SyntenyCcUC02G028100
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3452241.1 hypothetical protein FNV43_RR08339 [Rhamnella rubrinervis]8.6e-1084.44Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSIVVVKV+M EESLPQGI+GE ISVYTVKSIFD MKKT+ VES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
KAF8376870.1 hypothetical protein HHK36_031479 [Tetracentron sinense]7.0e-1291.11Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSIVVVKV+M EESLPQGI+GEVISVYTVKSIFDGMKKT+MVES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
RYQ91103.1 hypothetical protein Ahy_B09g096963 isoform C [Arachis hypogaea]1.7e-1086.67Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSIVVVK +M EESLPQGI+GEVISVYTVKSIF GMKKT+MVES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
THU42093.1 hypothetical protein C4D60_Mb00t02020 [Musa balbisiana]2.9e-1082.22Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSI+VVKV+MLEESLP GI+GEVISVYTVKSIFD +KKT++VES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
VVW92832.1 unnamed protein product, partial [Nymphaea colorata]4.5e-1186.67Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSIVVVKV+M EESLPQGI+GEVISVYTVKSIFDGM+KT++VES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
TrEMBL top hitse value%identityAlignment
A0A444XN45 Uncharacterized protein8.4e-1186.67Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSIVVVK +M EESLPQGI+GEVISVYTVKSIF GMKKT+MVES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
A0A445ECI1 Uncharacterized protein5.4e-1082.22Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MD+IVVVK +M EESLPQGIKGE+ISVYTV SIF GMKKT+MVES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
A0A4S8I1U1 Uncharacterized protein1.4e-1082.22Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSI+VVKV+MLEESLP GI+GEVISVYTVKSIFD +KKT++VES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
A0A5K1HZ25 Uncharacterized protein (Fragment)2.2e-1186.67Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MDSIVVVKV+M EESLPQGI+GEVISVYTVKSIFDGM+KT++VES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
A0A6C0FD27 Ribosomal protein L22.1e-0977.78Show/hide
Query:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
        MD  VVVKV++ EESLPQGI+GEVIS YTVKSIFDG+KKT++VES
Subjt:  MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCATAGTTGTGGTAAAGGTCATAATGCTAGAGGAATCATTACCGCAAGGCATAAAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAAT
GAAAAAGACATTTATGGTAGAATCGTAA
mRNA sequenceShow/hide mRNA sequence
CACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCTACGAAATAATTTGATCTATGGACAGCATAGTTGTGGTAAAGGTCATAATGCTAGAGGAATCATTACCG
CAAGGCATAAAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATTTATGGTAGAATCGTAACCATAGAATACGACCCTAATCAA
AATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACAATTGTTTCTGTGAAACTGATTTCAAA
AGAGGGGAAATCGGCCACATTAAAATTACTTTCTGGGGAGGTCTGTTTGATATCTAAAAATTGCTCAGCAATAGTTGGACAAGTGGAGAATGCTGG
Protein sequenceShow/hide protein sequence
MDSIVVVKVIMLEESLPQGIKGEVISVYTVKSIFDGMKKTFMVES