; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G028170 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G028170
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionATP synthase subunit beta, chloroplastic
Genome locationCicolChr02:21599571..21614298
RNA-Seq ExpressionCcUC02G028170
SyntenyCcUC02G028170
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
IPR024034 - ATPase, F1/V1 complex, beta/alpha subunit, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAY19351.1 ATP synthase beta subunit, partial [Oxalis stricta]9.7e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

AEH26939.1 ATP synthase beta subunit, partial [Sabatia angularis]7.4e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT++RARKIE FLSQPFFVAEVFTGSPGKYVGLVETIR F+LILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

AMC30679.1 ATP synthase CF1 beta subunit [Oxalis dillenii]9.7e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

AOO76765.1 ATP synthase beta subunit, partial [Ellipanthus glabrifolius]9.7e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

CAB90080.1 ATP synthase beta subunit, partial [Fuchsia procumbens]7.4e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINE+NIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGLVETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

TrEMBL top hitse value%identityAlignment
A0A1C9HC06 ATP synthase subunit beta (Fragment)4.7e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

A0A251UEG0 H(+)-transporting two-sector ATPase1.7e-12478.68Show/hide
Query:  SFSPLLTWRKNRTIRRGGVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-------
        SFSPL  WRKNRTIR  GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINE+NIAESKVALVYGQMNEPP AR RVG       
Subjt:  SFSPLLTWRKNRTIRRGGVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-------

Query:  ----------VLLFIDNIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLS
                  VLLF+DNIFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+
Subjt:  ----------VLLFIDNIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLS

Query:  AKGIYPTVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIRE
        AKGIYP VDPLDSTSTMLQPRIVG+EHYETAQ+VK+TLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR 
Subjt:  AKGIYPTVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIRE

Query:  FKLILSGELDGLLEQAFYL
        F+LILSGELDGL EQAFYL
Subjt:  FKLILSGELDGLLEQAFYL

A0A7G7YEM8 ATP synthase subunit beta, chloroplastic4.7e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

I3NTB5 ATP synthase subunit beta (Fragment)3.6e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT++RARKIE FLSQPFFVAEVFTGSPGKYVGLVETIR F+LILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

Q9MRJ2 ATP synthase subunit beta (Fragment)3.6e-11980.79Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINE+NIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGLVETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

SwissProt top hitse value%identityAlignment
B1A942 ATP synthase subunit beta, chloroplastic1.1e-12079.8Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINE+N+AESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVK+TLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

Q49KZ1 ATP synthase subunit beta, chloroplastic8.2e-12180.13Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINE+NIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVK+TLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

Q4VZI5 ATP synthase subunit beta, chloroplastic8.2e-12180.13Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEEN AESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVK+TLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR FKLILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

Q8MBK3 ATP synthase subunit beta, chloroplastic4.8e-12180.46Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVKETLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR F+LILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

Q8MBM4 ATP synthase subunit beta, chloroplastic1.1e-12080.13Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINEENIAESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG LQERITSTKEGSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQRVK+TLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR F+LILSGELDGL EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL

Arabidopsis top hitse value%identityAlignment
AT5G08670.1 ATP synthase alpha/beta family protein9.4e-9664.03Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVIN-EENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFID
        GVGKTVLIMELINN+AKAHGG SVF GVGERT EGNDLY EM ES VI   E  +ESK ALVYGQMNEPP AR RVG                 VLLFID
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVIN-EENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFID

Query:  NIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTST
        NIFRF QA SEVSALL  +        +L+ ++GALQERIT+TK+GSITS+Q +YVP DDLTDPAPATTFAHLDATTVLSR +S  GIYP VDPLDSTS 
Subjt:  NIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTST

Query:  MLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQA
        ML P I+GEEHY TA+ V++ LQ          I+ +DELSE+D+LT+ RARKI+ FLSQPF VAE+FTG+PGKYV L E I  F+ +L G+ D L EQ+
Subjt:  MLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQA

Query:  FYL
        FY+
Subjt:  FYL

AT5G08680.1 ATP synthase alpha/beta family protein9.4e-9664.03Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVIN-EENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFID
        GVGKTVLIMELINN+AKAHGG SVF GVGERT EGNDLY EM ES VI   E  +ESK ALVYGQMNEPP AR RVG                 VLLFID
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVIN-EENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFID

Query:  NIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTST
        NIFRF QA SEVSALL  +        +L+ ++GALQERIT+TK+GSITS+Q +YVP DDLTDPAPATTFAHLDATTVLSR +S  GIYP VDPLDSTS 
Subjt:  NIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTST

Query:  MLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQA
        ML P I+GEEHY TA+ V++ LQ          I+ +DELSE+D+LT+ RARKI+ FLSQPF VAE+FTG+PGKYV L E I  F+ +L G+ D L EQ+
Subjt:  MLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQA

Query:  FYL
        FY+
Subjt:  FYL

AT5G08690.1 ATP synthase alpha/beta family protein9.4e-9664.03Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVIN-EENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFID
        GVGKTVLIMELINN+AKAHGG SVF GVGERT EGNDLY EM ES VI   E  +ESK ALVYGQMNEPP AR RVG                 VLLFID
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVIN-EENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFID

Query:  NIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTST
        NIFRF QA SEVSALL  +        +L+ ++GALQERIT+TK+GSITS+Q +YVP DDLTDPAPATTFAHLDATTVLSR +S  GIYP VDPLDSTS 
Subjt:  NIFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTST

Query:  MLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQA
        ML P I+GEEHY TA+ V++ LQ          I+ +DELSE+D+LT+ RARKI+ FLSQPF VAE+FTG+PGKYV L E I  F+ +L G+ D L EQ+
Subjt:  MLQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQA

Query:  FYL
        FY+
Subjt:  FYL

ATCG00480.1 ATP synthase subunit beta4.6e-11978.15Show/hide
Query:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN
        GVGKTVLIMELINNIAKAHGGVSVFGGVGERT EGNDLYMEMKES VINE+N+AESKVALVYGQMNEPP AR RVG                 VLLFIDN
Subjt:  GVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPRARTRVG-----------------VLLFIDN

Query:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM
        IFRFVQA SEVSALL  +        +LS EMG LQERITSTK+GSITSIQ VYVP DDLTDPAPATTFAHLDATTVLSRGL+AKGIYP VDPLDSTSTM
Subjt:  IFRFVQARSEVSALLECL--------SLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAKGIYPTVDPLDSTSTM

Query:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF
        LQPRIVGEEHYETAQ+VK+TLQ          I+ LDELSEEDRLT+ RARKIE FLSQPFFVAEVFTGSPGKYVGL ETIR F LILSGE D L EQAF
Subjt:  LQPRIVGEEHYETAQRVKETLQ---------PIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAF

Query:  YL
        YL
Subjt:  YL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGGTCGCGGGTTCAGATCCGGCTGGGTTCAGATCTGGTCGCGGGTTCAGATCCGGTTGGGTTCAGATCCGGTCGCCTCCCCCATAGGTCCATGCCGTAGTCAATATAG
CAGGAATGAAAGCAGTGGATCTTTTAGCCCCTTATTGACGTGGAGGAAAAATAGGACTATTCGGAGGGGTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACA
ACATTGCCAAAGCTCATGGAGGTGTATCCGTATTTGGAGGAGTAGGTGAACGTACTTGTGAAGGAAATGATCTTTACATGGAAATGAAAGAATCCAAAGTAATTAATGAA
GAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACCGCCGAGAGCTCGTACGAGAGTTGGCGTGCTTCTATTTATCGATAATATCTTCCGTTT
CGTTCAAGCGAGATCTGAAGTATCAGCGTTACTAGAATGCCTTAGCCTTAGTATTGAAATGGGTGCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTT
CTATTCAAACTGTTTATGTACCTCTGGACGATTTAACCGATCCTGCTCCTGCCACCACGTTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTATCTGCCAAA
GGTATCTATCCAACAGTAGATCCTTTAGATTCAACCTCAACTATGCTACAACCCCGAATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAAGAAACCTTACA
ACCTATCATTGAGTTGGACGAATTATCCGAAGAGGATCGCTTAACCATAACACGAGCACGAAAAATTGAGCATTTCTTATCCCAACCTTTTTTCGTAGCAGAAGTATTTA
CTGGTTCCCCCGGGAAATATGTTGGCCTAGTAGAAACAATTAGAGAGTTTAAATTAATCCTTTCTGGAGAATTAGATGGTCTTCTCGAACAAGCCTTTTATTTG
mRNA sequenceShow/hide mRNA sequence
TCTGGTCGCGGGTTCAGATCCGGCTGGGTTCAGATCTGGTCGCGGGTTCAGATCCGGTTGGGTTCAGATCCGGTCGCCTCCCCCATAGGTCCATGCCGTAGTCAATATAG
CAGGAATGAAAGCAGTGGATCTTTTAGCCCCTTATTGACGTGGAGGAAAAATAGGACTATTCGGAGGGGTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACA
ACATTGCCAAAGCTCATGGAGGTGTATCCGTATTTGGAGGAGTAGGTGAACGTACTTGTGAAGGAAATGATCTTTACATGGAAATGAAAGAATCCAAAGTAATTAATGAA
GAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACCGCCGAGAGCTCGTACGAGAGTTGGCGTGCTTCTATTTATCGATAATATCTTCCGTTT
CGTTCAAGCGAGATCTGAAGTATCAGCGTTACTAGAATGCCTTAGCCTTAGTATTGAAATGGGTGCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTT
CTATTCAAACTGTTTATGTACCTCTGGACGATTTAACCGATCCTGCTCCTGCCACCACGTTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTATCTGCCAAA
GGTATCTATCCAACAGTAGATCCTTTAGATTCAACCTCAACTATGCTACAACCCCGAATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAAGAAACCTTACA
ACCTATCATTGAGTTGGACGAATTATCCGAAGAGGATCGCTTAACCATAACACGAGCACGAAAAATTGAGCATTTCTTATCCCAACCTTTTTTCGTAGCAGAAGTATTTA
CTGGTTCCCCCGGGAAATATGTTGGCCTAGTAGAAACAATTAGAGAGTTTAAATTAATCCTTTCTGGAGAATTAGATGGTCTTCTCGAACAAGCCTTTTATTTG
Protein sequenceShow/hide protein sequence
SGRGFRSGWVQIWSRVQIRLGSDPVASPIGPCRSQYSRNESSGSFSPLLTWRKNRTIRRGGVGKTVLIMELINNIAKAHGGVSVFGGVGERTCEGNDLYMEMKESKVINE
ENIAESKVALVYGQMNEPPRARTRVGVLLFIDNIFRFVQARSEVSALLECLSLSIEMGALQERITSTKEGSITSIQTVYVPLDDLTDPAPATTFAHLDATTVLSRGLSAK
GIYPTVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQPIIELDELSEEDRLTITRARKIEHFLSQPFFVAEVFTGSPGKYVGLVETIREFKLILSGELDGLLEQAFYL