; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G028280 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G028280
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTransmembrane protein
Genome locationCicolChr02:22114061..22114432
RNA-Seq ExpressionCcUC02G028280
SyntenyCcUC02G028280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8008693.1 hypothetical protein FH972_005182 [Carpinus fangiana]9.8e-3261.9Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQM---NKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ
        M+WF  KRRGPEWKQGWTGQTLGS+S+PP   LTIFGIVIVLLW SQ +T Y+AQ+     NFQL +FLLPIL+I FM++YS GG  +  L R    S Q
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQM---NKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ

Query:  R-GASPWTIAILVPLILILLYYQPSF
        R G  PW +AILV ++L+LL YQ SF
Subjt:  R-GASPWTIAILVPLILILLYYQPSF

KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]1.6e-3465.08Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSY-SIGGLINFRLRRPATGST
        M+WF PKRRGPEWKQGWTGQTL S+S+PP   LTIFGIVIVLLWFSQ+ TGY+AQ+ +   NFQL L +LPIL+IFFM+ Y S GG  NF+LRRP     
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSY-SIGGLINFRLRRPATGST

Query:  QRGASPWTIAILVPLILILLYYQPSF
        + G SPW +AIL+ L+L+LL YQ SF
Subjt:  QRGASPWTIAILVPLILILLYYQPSF

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-4476.19Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTL-GSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGST
        M+W +PKRRGPEWKQ WTGQTL GSVSSPPPQ LTIFGIVIVLLWFSQ  TGY+ QM++   NFQL+LFLLPILVIFFMSSYS+ GLIN R  R ATGS 
Subjt:  MDWFQPKRRGPEWKQGWTGQTL-GSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGST

Query:  QRGASPWTIAILVPLILILLYYQPSF
        +RGASP TI ILV LIL+LLY++PSF
Subjt:  QRGASPWTIAILVPLILILLYYQPSF

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]4.0e-4175Show/hide
Query:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQR
        MD F PKRRGPEWK+G   TGQTL SVS PP Q L IFGIVIVLLWFSQFN G+EAQ+N++FQL LFLLPI VIFFM SYS   LINF  RR  TG  QR
Subjt:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQR

Query:  GASPWTIAILVPLILILLYYQPSF
        GASPWTIAILV LIL+LLYYQ SF
Subjt:  GASPWTIAILVPLILILLYYQPSF

PON83413.1 Transmembrane protein [Trema orientale]7.5e-3257.48Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ
        M+WF PKRRGP+WKQGWT QT+ S+S+P    L IF IV+VLLW SQ+ TGY+AQ+ +   NFQL +FLLP+L+I FM+SYS  GL NFR RRP   +  
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ

Query:  R--GASPWTIAILVPLILILLYYQPSF
        +  G+SPW +A  V L+L+LL YQ SF
Subjt:  R--GASPWTIAILVPLILILLYYQPSF

TrEMBL top hitse value%identityAlignment
A0A0A0LLH8 Uncharacterized protein1.9e-4175Show/hide
Query:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQR
        MD F PKRRGPEWK+G   TGQTL SVS PP Q L IFGIVIVLLWFSQFN G+EAQ+N++FQL LFLLPI VIFFM SYS   LINF  RR  TG  QR
Subjt:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQR

Query:  GASPWTIAILVPLILILLYYQPSF
        GASPWTIAILV LIL+LLYYQ SF
Subjt:  GASPWTIAILVPLILILLYYQPSF

A0A2P5C233 Transmembrane protein3.1e-3158.27Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPA--TGS
        M WF PKRRGP+WKQGWT QT+ SVS+P    L IF IV+VLLW SQ+ TG++AQ+ +   NFQL +FLLP+L+I FM+SYS  GL NFR RRP   T  
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPA--TGS

Query:  TQRGASPWTIAILVPLILILLYYQPSF
           G+SPW +A+ V L+L+LL YQ SF
Subjt:  TQRGASPWTIAILVPLILILLYYQPSF

A0A2P5ED06 Transmembrane protein3.6e-3257.48Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ
        M+WF PKRRGP+WKQGWT QT+ S+S+P    L IF IV+VLLW SQ+ TGY+AQ+ +   NFQL +FLLP+L+I FM+SYS  GL NFR RRP   +  
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ

Query:  R--GASPWTIAILVPLILILLYYQPSF
        +  G+SPW +A  V L+L+LL YQ SF
Subjt:  R--GASPWTIAILVPLILILLYYQPSF

A0A5N6QRB9 Uncharacterized protein4.7e-3261.9Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQM---NKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ
        M+WF  KRRGPEWKQGWTGQTLGS+S+PP   LTIFGIVIVLLW SQ +T Y+AQ+     NFQL +FLLPIL+I FM++YS GG  +  L R    S Q
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQM---NKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQ

Query:  R-GASPWTIAILVPLILILLYYQPSF
        R G  PW +AILV ++L+LL YQ SF
Subjt:  R-GASPWTIAILVPLILILLYYQPSF

B9STD1 Uncharacterized protein8.1e-3256.92Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATG---
        M+WF P+RRGPEWKQGWTGQTLGS+S PPP  L IFGIVI+LLW SQ+ T Y+AQ++    NFQL LFLLP+L+I  ++SYS   +  FRLR+P +G   
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATG---

Query:  --STQRGASPWTIAILVPLILILLYYQPSF
          S +  + PW IA  V ++L+LL YQ SF
Subjt:  --STQRGASPWTIAILVPLILILLYYQPSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19875.1 unknown protein8.3e-0530.19Show/hide
Query:  LGSVSSPPPQFLTIFGIVIVLL---WFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQR-GASPWTIAILVPLILILLY
        L  +S P P    +F +V  +L   W+  F +  E  ++ + +LV    P+ ++  +  +S GGL +F +  P   S  R G+SPW +A ++ LIL ++ 
Subjt:  LGSVSSPPPQFLTIFGIVIVLL---WFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQR-GASPWTIAILVPLILILLY

Query:  YQPSFR
        YQ  F+
Subjt:  YQPSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGTTTCAACCAAAGAGAAGAGGTCCAGAGTGGAAACAAGGATGGACAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCACCTCAATTTCTCACCATTTTTGG
TATTGTCATTGTCTTGCTTTGGTTTTCTCAGTTCAACACGGGCTATGAAGCTCAAATGAACAAAAATTTTCAGCTGGTTCTTTTCTTGTTGCCCATCTTGGTCATTTTCT
TCATGTCTTCATATTCAATTGGTGGACTGATCAACTTCCGACTTCGCCGACCGGCAACCGGGTCAACTCAACGAGGTGCCTCTCCATGGACCATTGCCATTTTGGTCCCT
CTCATTCTGATTTTGCTTTATTACCAACCCTCATTCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGTTTCAACCAAAGAGAAGAGGTCCAGAGTGGAAACAAGGATGGACAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCACCTCAATTTCTCACCATTTTTGG
TATTGTCATTGTCTTGCTTTGGTTTTCTCAGTTCAACACGGGCTATGAAGCTCAAATGAACAAAAATTTTCAGCTGGTTCTTTTCTTGTTGCCCATCTTGGTCATTTTCT
TCATGTCTTCATATTCAATTGGTGGACTGATCAACTTCCGACTTCGCCGACCGGCAACCGGGTCAACTCAACGAGGTGCCTCTCCATGGACCATTGCCATTTTGGTCCCT
CTCATTCTGATTTTGCTTTATTACCAACCCTCATTCCGTTGA
Protein sequenceShow/hide protein sequence
MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRLRRPATGSTQRGASPWTIAILVP
LILILLYYQPSFR