; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G029530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G029530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L26
Genome locationCicolChr02:24598463..24600017
RNA-Seq ExpressionCcUC02G029530
SyntenyCcUC02G029530
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148028.1 60S ribosomal protein L26-1 [Cucumis sativus]6.8e-7098.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]8.0e-7199.31Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]1.2e-6996.55Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]4.4e-6996.55Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRK+RKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]3.4e-6995.17Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

TrEMBL top hitse value%identityAlignment
A0A0A0LJI3 KOW domain-containing protein3.3e-7098.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

A0A1S3C7Q4 60S ribosomal protein L26-1-like3.9e-7199.31Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

A0A5A7TS06 60S ribosomal protein L26-1-like3.9e-7199.31Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

A0A6J1D6T1 60S ribosomal protein L26-1-like5.6e-7096.55Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

A0A6J1L4P7 60S ribosomal protein L26-1-like1.6e-6995.17Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQS+
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

SwissProt top hitse value%identityAlignment
P12749 60S ribosomal protein L261.3e-4467.61Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R KNRK HF+APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

P51414 60S ribosomal protein L26-15.2e-6584.14Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRKNRKAHF+A SS RR++MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ++
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

Q39411 60S ribosomal protein L263.9e-6078.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRR+NRK HF+A SS RR+ MS+PLS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK +IHIER+TREKVNG+TVNVG++P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        +KV+ITKL+LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ++
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

Q9FJX2 60S ribosomal protein L26-21.3e-6382.76Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRKNRKAHF+APSSVRR+LMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M+++
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

Q9UNX3 60S ribosomal protein L26-like 13.0e-4470.15Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R KNRK HF+APS VRR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKG
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKG

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein3.7e-6684.14Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRKNRKAHF+A SS RR++MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ++
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI

AT5G67510.1 Translation protein SH3-like family protein9.1e-6582.76Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRKNRKAHF+APSSVRR+LMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M+++
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGTAAGGCTCACTTCTCCGCGCCGTCGAGCGTCCGGCGGATTTTGATGAGTGCGCCCCTCTCCGGCGA
CCTCCGCTCCAAGTACAATGTCCGCTCGATGCCGATCCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACCTACAAAGGCCGTGAAGGTAAGGTCGTGCAGGTCTACC
GTCGCAAGTGGATCATTCACATTGAGCGCATCACTAGAGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCAAGCCGTCGAAGGTTATGATCACAAAGCTCAAGTTG
GATAAGGACAGGAAATCGCTGCTCGATCGTAAGGCCAAGGGCCGTGCTTCTGCAGATAAGGATAAGGGCACTAAATTCACGGCTGAGGATATTATGCAAAGTATTATTGT
TGTTCTTGTGAATGAATTTCGTACTGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTATAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGTAAGGCTCACTTCTCCGCGCCGTCGAGCGTCCGGCGGATTTTGATGAGTGCGCCCCTCTCCGGCGA
CCTCCGCTCCAAGTACAATGTCCGCTCGATGCCGATCCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACCTACAAAGGCCGTGAAGGTAAGGTCGTGCAGGTCTACC
GTCGCAAGTGGATCATTCACATTGAGCGCATCACTAGAGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCAAGCCGTCGAAGGTTATGATCACAAAGCTCAAGTTG
GATAAGGACAGGAAATCGCTGCTCGATCGTAAGGCCAAGGGCCGTGCTTCTGCAGATAAGGATAAGGGCACTAAATTCACGGCTGAGGATATTATGCAAAGTATTATTGT
TGTTCTTGTGAATGAATTTCGTACTGAAGCTTAA
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSIIVVLVNEFRTEA