CuGenDBv2

Gene ID	CcUC02G031360
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	nuclear pore complex protein NUP43
Genome location	CicolChr02:27035849..27041468
RNA-Seq Expression	CcUC02G031360
Synteny	CcUC02G031360
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-186

87.23

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDV DGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFK DWASGIVHCIDIHPSRKHTCL                  + GSFGT FAWDLR QQQPIILSGLEGSK SN SPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAMICSEDGI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_004144716.1 nuclear pore complex protein NUP43 [Cucumis sativus]

3.4e-189

88.86

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFA IAL+DSDSDSSSIEIHS+ Q PLDI PHSTWISPSRVSSLKTSQL++NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDV DGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKA+WASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEGSK SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        LGGMSS+QILPAMICSEDGILTSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_008452472.1 PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo]

1.5e-189

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFA IAL+DSD DSSSIEIHS+ Q PLDIAPHSTW+SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDV D GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEG+K SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSS+QILPAMICSEDGILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

9.3e-187

87.5

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDV DGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFK DWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLR QQQPIILSGLEGSK SN SPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAMICSEDGI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_038889924.1 nuclear pore complex protein NUP43 [Benincasa hispida]

8.4e-188

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWL  LS FSR A IAL+DSDSDSSSIEIHS+ QKPLDIAPHSTW SPSRVSSLKTSQLYQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEA++DSELSVPEKMLHD PISCVDV DGGGECLTVSEDGRVNLVS+GESGLNY RIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVH IDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEGSK SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSSSQILPAMICSEDGILTSIEQGKQPV+LLAEPCAINGFDIDR HPSEVICNLEWES+AILSR
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ46 Uncharacterized protein

1.7e-189

88.86

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFA IAL+DSDSDSSSIEIHS+ Q PLDI PHSTWISPSRVSSLKTSQL++NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDV DGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKA+WASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEGSK SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        LGGMSS+QILPAMICSEDGILTSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A1S3BTA6 nuclear pore complex protein NUP43

7.4e-190

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFA IAL+DSD DSSSIEIHS+ Q PLDIAPHSTW+SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDV D GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEG+K SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSS+QILPAMICSEDGILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

7.4e-190

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFA IAL+DSD DSSSIEIHS+ Q PLDIAPHSTW+SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDV D GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEG+K SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSS+QILPAMICSEDGILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1FCG9 nuclear pore complex protein NUP43

4.5e-187

87.5

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDV DGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFK DWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLR QQQPIILSGLEGSK SN SPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAMICSEDGI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

4.7e-184

85.87

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDV D GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAV QFK DWASGIVHC+DIHPSRKHTCL                  + GSFGTVFAWDLR QQQPIILSGLEGSK SN SPCESEVWEV YDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAMICSEDGI+TSIEQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

3.9e-103

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A YD+D DSSSIEI S+   P         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY

Query:  TGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ
        +GSLHVL ++ +E A+I+   +   +  H   +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+                  + GS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVW
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW

Query:  EVHYDPYIKSGNLGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        EV YD Y KS     +SSS+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  EVHYDPYIKSGNLGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

2.8e-104

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Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A YD+D DSSSIEI S+   P         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY

Query:  TGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ
        +GSLHVL ++ +E A+I+   +   +  H   +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+                  + GS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVW
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW

Query:  EVHYDPYIKSGNLGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        EV YD Y KS     +SSS+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  EVHYDPYIKSGNLGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Sequences

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CDS sequence

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ATGGCGATCGTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGCGTTCGGTGGCTTCCACCGCTCTCCGCATTTAGCCGG
TTTGCCACCATTGCCCTTTACGACTCTGATTCTGACTCATCCTCCATTGAAATTCACTCGGTGGCTCAAAAGCCACTGGATATAGCTCCTCATTCGACATGGATA
TCACCTTCAAGAGTGTCTTCCCTTAAAACCTCTCAACTCTACCAAAATCCTCTTGTTTTCGCTTCCACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCA
ATGGAAGCGTCGATCGACTCGGAGCTCTCGGTGCCCGAGAAGATGTTGCACGACGTACCTATTTCATGTGTCGATGTGACGGACGGGGGAGGTGAATGTCTGACT
GTTTCGGAAGATGGACGAGTGAATTTGGTGAGCGTTGGAGAATCTGGATTGAATTATCGTCGGATTTTCGATAGTAATGGGTTGGTGTCGTATACCGCAGTGAAA
TGGGCATCGCCTACTGAGTTTGCGACTGGAGGTTGTGGCTTTAGCTTGCAATGGTGGGATCAGAGAAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGG
GCTTCTGGTATAGTTCACTGCATTGATATCCATCCATCACGAAAGCATACTTGTTTGGTAAAATCTGTTACCTTTTTTTCTTATTTTTACATGATACTCAAGCAG
GCAAAGTCACGGGGCTCTTTTGGTACTGTTTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAGGCTTCAAATCCT
TCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACTTGGGTGGCATGTCATCTTCACAGATTTTACCTGCTATGATCTGC
TCTGAGGATGGGATTCTAACTAGTATTGAGCAAGGCAAGCAGCCTGTTGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTTGACATTGACCGTCAACACCCA
TCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTTTCAAGACCTTGA

mRNA sequence

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CCGCCGTCTCAAAAAAATTAAATTCCGACGTCAATCTGATTCTGAGTCTTCCTTGGAAGTGAAAGGAAGCTCCGTTAAACCCTAACAATGGCGATCGTTAGTCCC
CAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGCGTTCGGTGGCTTCCACCGCTCTCCGCATTTAGCCGGTTTGCCACCATTGCCCTT
TACGACTCTGATTCTGACTCATCCTCCATTGAAATTCACTCGGTGGCTCAAAAGCCACTGGATATAGCTCCTCATTCGACATGGATATCACCTTCAAGAGTGTCT
TCCCTTAAAACCTCTCAACTCTACCAAAATCCTCTTGTTTTCGCTTCCACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGATCGAC
TCGGAGCTCTCGGTGCCCGAGAAGATGTTGCACGACGTACCTATTTCATGTGTCGATGTGACGGACGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGA
GTGAATTTGGTGAGCGTTGGAGAATCTGGATTGAATTATCGTCGGATTTTCGATAGTAATGGGTTGGTGTCGTATACCGCAGTGAAATGGGCATCGCCTACTGAG
TTTGCGACTGGAGGTTGTGGCTTTAGCTTGCAATGGTGGGATCAGAGAAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGGGCTTCTGGTATAGTTCAC
TGCATTGATATCCATCCATCACGAAAGCATACTTGTTTGGTAAAATCTGTTACCTTTTTTTCTTATTTTTACATGATACTCAAGCAGGCAAAGTCACGGGGCTCT
TTTGGTACTGTTTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAGGCTTCAAATCCTTCGCCATGTGAAAGTGAG
GTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACTTGGGTGGCATGTCATCTTCACAGATTTTACCTGCTATGATCTGCTCTGAGGATGGGATTCTA
ACTAGTATTGAGCAAGGCAAGCAGCCTGTTGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTTGACATTGACCGTCAACACCCATCAGAAGTGATATGTAAC
TTGGAGTGGGAATCCGTTGCCATCCTTTCAAGACCTTGATTTTCAGAAGTCATCGTTTTTTCTAAATCATCAGGTTCCAATGCACTATATTAATTCCTTTAACGA
TTTAAGGAGTATTCGTAGGTTTTTATCTCTCATTGAGTGCATGTAATTTCTTACTTTTAGGCTCATGTAAATTTTGTGGCTGTAGCTTTGTTTTTTTACCACATA
ATTGGAACTCAATTTTGATATGGATTTTCATACTGGTCAGCGACCATATCAGGG

Protein sequence

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MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFATIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHVLSVEP
MEASIDSELSVPEKMLHDVPISCVDVTDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKADW
ASGIVHCIDIHPSRKHTCLVKSVTFFSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMIC
SEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

CcUC02G031360 (gene) of Watermelon (PI 537277) v1 genome