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CcUC02G031930 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G031930
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr02:27652146..27663997
RNA-Seq ExpressionCcUC02G031930
SyntenyCcUC02G031930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599176.1 hypothetical protein SDJN03_08954, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2469.16Show/hide
Query:  VSLYNLAGVSRRRKSSNGGKVTEIGIPLDGIRIFPQILHIPVDRRPLLPLLMELELRLVPPLASRPSQHSDRRRTRLVSHHRLRIRRLSLNDRLLLRLLR
        ++LYNLA VS RR+S NGGKVT+I               IPV+RRP L LLMELE RLVPPLASRPSQ SDRRR RLV H RLRIRRLSL+DRLLLRLLR
Subjt:  VSLYNLAGVSRRRKSSNGGKVTEIGIPLDGIRIFPQILHIPVDRRPLLPLLMELELRLVPPLASRPSQHSDRRRTRLVSHHRLRIRRLSLNDRLLLRLLR

Query:  LQLVIRS
        LQL+IR+
Subjt:  LQLVIRS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGGTGGAAGCTGGAAAACAGAGCGTGTGGGTGCGATTTGAGAGGCTGGAGTTGGTGGGTTTGGGTTTGGGATTTGGGATTGGGATTGAGCTGTTGGTC
GGGCTTTTGCTTTGCTGTGAGCGAAATGGGCAGTCTCTGGCAATCACAGCCGCCAGCGTCGCCATACTCTTGGATAAGTCTGCAGCCCCACGTCCTCGTCCAGCG
CGTGTCAAGCAAGCGCCAGTGTCTCTCTATAATCTCGCCGGAGTTTCAAGAAGGCGAAAGAGCAGCAATGGCGGGAAGGTTACCGAGATCGGCATTCCGCTGGAC
GGAATTCGAATTTTCCCTCAGATCCTCCATATTCCGGTGGACCGACGTCCTCTCCTCCCTCTTCTCATGGAACTGGAGCTCCGCCTGGTTCCGCCGCTGGCCTCG
CGGCCTTCTCAACATTCCGATCGTCGACGAACTCGTCTGGTCTCTCACCACCGCCTTCGAATCCGTCGCCTTAGTCTCAATGATCGGCTTCTTCTTCGTCTTCTA
CGGCTGCAACTTGTAATCCGTTCTCGGTCGATTCCATTTCGAAATCGCTTGTCGCTTCCTCAGCGACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGGTGGAAGCTGGAAAACAGAGCGTGTGGGTGCGATTTGAGAGGCTGGAGTTGGTGGGTTTGGGTTTGGGATTTGGGATTGGGATTGAGCTGTTGGTC
GGGCTTTTGCTTTGCTGTGAGCGAAATGGGCAGTCTCTGGCAATCACAGCCGCCAGCGTCGCCATACTCTTGGATAAGTCTGCAGCCCCACGTCCTCGTCCAGCG
CGTGTCAAGCAAGCGCCAGTGTCTCTCTATAATCTCGCCGGAGTTTCAAGAAGGCGAAAGAGCAGCAATGGCGGGAAGGTTACCGAGATCGGCATTCCGCTGGAC
GGAATTCGAATTTTCCCTCAGATCCTCCATATTCCGGTGGACCGACGTCCTCTCCTCCCTCTTCTCATGGAACTGGAGCTCCGCCTGGTTCCGCCGCTGGCCTCG
CGGCCTTCTCAACATTCCGATCGTCGACGAACTCGTCTGGTCTCTCACCACCGCCTTCGAATCCGTCGCCTTAGTCTCAATGATCGGCTTCTTCTTCGTCTTCTA
CGGCTGCAACTTGTAATCCGTTCTCGGTCGATTCCATTTCGAAATCGCTTGTCGCTTCCTCAGCGACATTAG
Protein sequenceShow/hide protein sequence
MGWVEAGKQSVWVRFERLELVGLGLGFGIGIELLVGLLLCCERNGQSLAITAASVAILLDKSAAPRPRPARVKQAPVSLYNLAGVSRRRKSSNGGKVTEIGIPLD
GIRIFPQILHIPVDRRPLLPLLMELELRLVPPLASRPSQHSDRRRTRLVSHHRLRIRRLSLNDRLLLRLLRLQLVIRSRSIPFRNRLSLPQRH