; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G032000 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G032000
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPolyketide cyclase/dehydrase and lipid transportsuperfamily protein
Genome locationCicolChr02:27718128..27721018
RNA-Seq ExpressionCcUC02G032000
SyntenyCcUC02G032000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER48588.1 polyketide cyclase/dehydrase and lipid transportsuperfamily protein, partial [Striga asiatica]9.4e-0626.11Show/hide
Query:  PSIYGNVRVCNHSCVRKSPLRLLTARIELSPRAILSISNPTKDVHLQIGKNQSWPRNKSNRQHGLKHDLPEHQVKILELIAIDKKDERAIETQIIANFQN
        PS +GN  +C+   +RKS LR LT+ +  SPR   ++ NP     L +  +  +        +  KHD P H  K       +        T      QN
Subjt:  PSIYGNVRVCNHSCVRKSPLRLLTARIELSPRAILSISNPTKDVHLQIGKNQSWPRNKSNRQHGLKHDLPEHQVKILELIAIDKKDERAIETQIIANFQN

Query:  SIVERKIYTLDQIIQVIRFALSTSPEDNQFVITNERSRVTFSRRRWIPFAFRLYPFLGTKIQNVEIIYLLRAISTTKNYH
                   Q++Q++     T+P+ +Q    N  SRV  + RRW P A    P    ++Q  E+  L   +   K+ H
Subjt:  SIVERKIYTLDQIIQVIRFALSTSPEDNQFVITNERSRVTFSRRRWIPFAFRLYPFLGTKIQNVEIIYLLRAISTTKNYH

TrEMBL top hitse value%identityAlignment
A0A5A7QUL3 Polyketide cyclase/dehydrase and lipid transportsuperfamily protein (Fragment)4.5e-0626.11Show/hide
Query:  PSIYGNVRVCNHSCVRKSPLRLLTARIELSPRAILSISNPTKDVHLQIGKNQSWPRNKSNRQHGLKHDLPEHQVKILELIAIDKKDERAIETQIIANFQN
        PS +GN  +C+   +RKS LR LT+ +  SPR   ++ NP     L +  +  +        +  KHD P H  K       +        T      QN
Subjt:  PSIYGNVRVCNHSCVRKSPLRLLTARIELSPRAILSISNPTKDVHLQIGKNQSWPRNKSNRQHGLKHDLPEHQVKILELIAIDKKDERAIETQIIANFQN

Query:  SIVERKIYTLDQIIQVIRFALSTSPEDNQFVITNERSRVTFSRRRWIPFAFRLYPFLGTKIQNVEIIYLLRAISTTKNYH
                   Q++Q++     T+P+ +Q    N  SRV  + RRW P A    P    ++Q  E+  L   +   K+ H
Subjt:  SIVERKIYTLDQIIQVIRFALSTSPEDNQFVITNERSRVTFSRRRWIPFAFRLYPFLGTKIQNVEIIYLLRAISTTKNYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTGTGAACAGGACGCCTCTGTATACTTTCCCATTGACAGTAGCAGTCATCAGGAAGCCAGAGTCGAAGGCGCCGTCAACTCTTCCTCGAACCTCCGACCCAATCT
GAAACAAACACAACGACAGAAGACTTGTGTTCTTTCACCGGACGAACGACATGGAGAAGCTGATGTTGTTCGGTCTTTAGTTGATTCTGGTGTCCAAAATATGAAAAATC
TTGCTGTGGAGTGGTTTGGACAACATTTCGGAACTCGGAGACTTTTCGAACTGGGGTCTGTTCTTGATCGGATTGTGATGGAGATGAATGCTGGGACAATGACAAAGAAT
GTTCCTCTTGCTCGGATTCAACCTCCCACACTTTCGGATTCATGGTTCTCCTCCGTTTTGGATGAATGTGGCTCAATGTCTATAAAGTTTTGCGCTAAACTACCCTCCAT
ATATGGCAATGTCCGAGTCTGCAACCACAGCTGTGTGAGAAAATCTCCCTTGAGGTTGCTGACCGCACGTATCGAGCTGAGTCCACGAGCAATATTGTCTATCTCCAACC
CCACCAAGGATGTACACCTGCAAATTGGAAAGAATCAGTCGTGGCCTCGAAACAAAAGTAACAGACAACATGGTTTAAAGCATGACCTGCCCGAACACCAGGTGAAGATC
CTTGAACTGATAGCTATTGACAAAAAAGATGAAAGAGCCATTGAGACACAAATCATTGCCAATTTCCAAAACAGTATAGTTGAAAGAAAGATTTATACTTTAGACCAAAT
CATTCAAGTAATTCGATTCGCCCTCTCCACTTCCCCCGAAGATAACCAGTTTGTCATCACCAACGAGCGTAGCCGTGTGACTTTCTCGAGGCGACGGTGGATTCCCTTTG
CATTCAGGTTGTACCCATTCCTTGGTACCAAGATCCAAAATGTGGAGATCATTTACCTTCTTAGAGCCATTAGTACCACCAAAAACTATCATCTGGCGCCGTGGCTGTCT
CTTGGGCCCGGACCCTGTCCGGTAGTTACCATGTTGGTCCAGACCATGGTGTCAAGATTTAGTACAAGAACATCACTGAAATGCAACCCCCCACAGCATCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTGTGAACAGGACGCCTCTGTATACTTTCCCATTGACAGTAGCAGTCATCAGGAAGCCAGAGTCGAAGGCGCCGTCAACTCTTCCTCGAACCTCCGACCCAATCT
GAAACAAACACAACGACAGAAGACTTGTGTTCTTTCACCGGACGAACGACATGGAGAAGCTGATGTTGTTCGGTCTTTAGTTGATTCTGGTGTCCAAAATATGAAAAATC
TTGCTGTGGAGTGGTTTGGACAACATTTCGGAACTCGGAGACTTTTCGAACTGGGGTCTGTTCTTGATCGGATTGTGATGGAGATGAATGCTGGGACAATGACAAAGAAT
GTTCCTCTTGCTCGGATTCAACCTCCCACACTTTCGGATTCATGGTTCTCCTCCGTTTTGGATGAATGTGGCTCAATGTCTATAAAGTTTTGCGCTAAACTACCCTCCAT
ATATGGCAATGTCCGAGTCTGCAACCACAGCTGTGTGAGAAAATCTCCCTTGAGGTTGCTGACCGCACGTATCGAGCTGAGTCCACGAGCAATATTGTCTATCTCCAACC
CCACCAAGGATGTACACCTGCAAATTGGAAAGAATCAGTCGTGGCCTCGAAACAAAAGTAACAGACAACATGGTTTAAAGCATGACCTGCCCGAACACCAGGTGAAGATC
CTTGAACTGATAGCTATTGACAAAAAAGATGAAAGAGCCATTGAGACACAAATCATTGCCAATTTCCAAAACAGTATAGTTGAAAGAAAGATTTATACTTTAGACCAAAT
CATTCAAGTAATTCGATTCGCCCTCTCCACTTCCCCCGAAGATAACCAGTTTGTCATCACCAACGAGCGTAGCCGTGTGACTTTCTCGAGGCGACGGTGGATTCCCTTTG
CATTCAGGTTGTACCCATTCCTTGGTACCAAGATCCAAAATGTGGAGATCATTTACCTTCTTAGAGCCATTAGTACCACCAAAAACTATCATCTGGCGCCGTGGCTGTCT
CTTGGGCCCGGACCCTGTCCGGTAGTTACCATGTTGGTCCAGACCATGGTGTCAAGATTTAGTACAAGAACATCACTGAAATGCAACCCCCCACAGCATCCCTAG
Protein sequenceShow/hide protein sequence
MMCEQDASVYFPIDSSSHQEARVEGAVNSSSNLRPNLKQTQRQKTCVLSPDERHGEADVVRSLVDSGVQNMKNLAVEWFGQHFGTRRLFELGSVLDRIVMEMNAGTMTKN
VPLARIQPPTLSDSWFSSVLDECGSMSIKFCAKLPSIYGNVRVCNHSCVRKSPLRLLTARIELSPRAILSISNPTKDVHLQIGKNQSWPRNKSNRQHGLKHDLPEHQVKI
LELIAIDKKDERAIETQIIANFQNSIVERKIYTLDQIIQVIRFALSTSPEDNQFVITNERSRVTFSRRRWIPFAFRLYPFLGTKIQNVEIIYLLRAISTTKNYHLAPWLS
LGPGPCPVVTMLVQTMVSRFSTRTSLKCNPPQHP