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CcUC02G032120 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G032120
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLON2
Genome locationCicolChr02:27828533..27832115
RNA-Seq ExpressionCcUC02G032120
SyntenyCcUC02G032120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA6427842.1 hypothetical protein FRX49_02505 [Trebouxia sp. A1-2]3.6e-0464.29Show/hide
Query:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLFF
        MA+S LTG F A D+R V+M QPA GPSLGV PAGT  W+ F
Subjt:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLFF
TrEMBL top hitse value%identityAlignment
A0A0A9CGC6 Uncharacterized protein1.3e-0446.38Show/hide
Query:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLF-------FEQYSSGKSVSNLSTFFHDIS
        +A+SFLT F MA DN DV +V PALGPS GVAPAGT    F       F  +SS  ++  +    H +S
Subjt:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLF-------FEQYSSGKSVSNLSTFFHDIS
A0A0A9KPR6 LON22.1e-0559.65Show/hide
Query:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGT--IVWLFFEQYSSGKSVSNLS
        +ARSFLTGF +A+D+ DVIMV PALGPSLGVAPAGT    + F +   SG   SN++
Subjt:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGT--IVWLFFEQYSSGKSVSNLS
A0A5J4Y9Z9 Uncharacterized protein1.7e-0464.29Show/hide
Query:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLFF
        MA+S LTG F A D+R V+M QPA GPSLGV PAGT  W+ F
Subjt:  MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLFF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGATCCTTTTTGACAGGCTTCTTCATGGCAAGTGACAATAGAGATGTCATCATGGTGCAACCAGCACTCGGCCCATCCTTAGGCGTTGCTCCAGCAGGAACGAT
TGTCTGGCTCTTTTTCGAGCAATATAGCTCGGGCAAGAGTGTGAGCAATTTGAGCACTTTCTTTCATGACATCTCCAAGCTGACCGGTAAGATGGAGCGCGCCTTTACCC
TCTCCCTGCTCAACTTGGGTGGTTTCTATGTAGAGAGTGGAACCTCCCATGGCGGTCCAAGCAAGCCCCATAACAACTCCTACTGGTGTCTTGTCATTCAACAACCTCCG
CCAGTACAGGTTCATTTGATGCTCCTTGTCTTACAAGCTGAAGAGCAATCTGCCGCATTACAAATAAAATTACATGGTAAGATACCTCAGCTAGAGATAAAGAAAGAGGA
AGACCTGTTCGGGTTTAATCCCACACGCTTCGCGTGTAGCTTTCTCCAAGTAGTCCCTTGCTATGTGCATCTTCTCGTCAGTAATATATCCAGCAATGGCAATGACCTCC
ATTCTGTCAAGAAGAGGATTGGGTATCATTTCAACAACATTCGCCGTGCAGACAAAAAGAACCTAGAAACTAATCACCTAACCCACCCACCTTTGAAAGGTCAATTGGGA
CATCAAGATAATGGTCCAAGAACCACATCAGTTAGTCCTCCAACGGAAAATCTGAAGAACTTACGATTCAATGCCCGAGCTATTGAACGACCAATGCTGTTAATCCATAG
TGATCTTCATCAAGAATTTTTTGGGCACCAAGGACATCAAAATTCTCATCACTGCAGTAGTAATGCAAAATTAGTGGCAAATGTCACATTCCCCATCATTGCATCAGCAA
GTCACAAATGCATACTGCAGACCAAAACAGAATCATTGCTGGCAAGTTTTACCATGGGCTCACAGAGAAGTAGCTCACCTGAAAGAGCTGTTTTGTCATCTGTCTCAAGT
CCCAGCTCC
mRNA sequenceShow/hide mRNA sequence
TCATGGCTAGATCCTTTTTGACAGGCTTCTTCATGGCAAGTGACAATAGAGATGTCATCATGGTGCAACCAGCACTCGGCCCATCCTTAGGCGTTGCTCCAGCAGGAACG
ATTGTCTGGCTCTTTTTCGAGCAATATAGCTCGGGCAAGAGTGTGAGCAATTTGAGCACTTTCTTTCATGACATCTCCAAGCTGACCGGTAAGATGGAGCGCGCCTTTAC
CCTCTCCCTGCTCAACTTGGGTGGTTTCTATGTAGAGAGTGGAACCTCCCATGGCGGTCCAAGCAAGCCCCATAACAACTCCTACTGGTGTCTTGTCATTCAACAACCTC
CGCCAGTACAGGTTCATTTGATGCTCCTTGTCTTACAAGCTGAAGAGCAATCTGCCGCATTACAAATAAAATTACATGGTAAGATACCTCAGCTAGAGATAAAGAAAGAG
GAAGACCTGTTCGGGTTTAATCCCACACGCTTCGCGTGTAGCTTTCTCCAAGTAGTCCCTTGCTATGTGCATCTTCTCGTCAGTAATATATCCAGCAATGGCAATGACCT
CCATTCTGTCAAGAAGAGGATTGGGTATCATTTCAACAACATTCGCCGTGCAGACAAAAAGAACCTAGAAACTAATCACCTAACCCACCCACCTTTGAAAGGTCAATTGG
GACATCAAGATAATGGTCCAAGAACCACATCAGTTAGTCCTCCAACGGAAAATCTGAAGAACTTACGATTCAATGCCCGAGCTATTGAACGACCAATGCTGTTAATCCAT
AGTGATCTTCATCAAGAATTTTTTGGGCACCAAGGACATCAAAATTCTCATCACTGCAGTAGTAATGCAAAATTAGTGGCAAATGTCACATTCCCCATCATTGCATCAGC
AAGTCACAAATGCATACTGCAGACCAAAACAGAATCATTGCTGGCAAGTTTTACCATGGGCTCACAGAGAAGTAGCTCACCTGAAAGAGCTGTTTTGTCATCTGTCTCAA
GTCCCAGCTCC
Protein sequenceShow/hide protein sequence
MARSFLTGFFMASDNRDVIMVQPALGPSLGVAPAGTIVWLFFEQYSSGKSVSNLSTFFHDISKLTGKMERAFTLSLLNLGGFYVESGTSHGGPSKPHNNSYWCLVIQQPP
PVQVHLMLLVLQAEEQSAALQIKLHGKIPQLEIKKEEDLFGFNPTRFACSFLQVVPCYVHLLVSNISSNGNDLHSVKKRIGYHFNNIRRADKKNLETNHLTHPPLKGQLG
HQDNGPRTTSVSPPTENLKNLRFNARAIERPMLLIHSDLHQEFFGHQGHQNSHHCSSNAKLVANVTFPIIASASHKCILQTKTESLLASFTMGSQRSSSPERAVLSSVSS
PSS