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CcUC02G032230 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G032230
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr02:27883748..27884038
RNA-Seq ExpressionCcUC02G032230
SyntenyCcUC02G032230
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0005849 - mRNA cleavage factor complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21522.1 hypothetical protein TSUD_34850 [Trifolium subterraneum]4.7e-0550.88Show/hide
Query:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
        +G+ ++  G+ ++++ GA+GDEMGEDLVGLVEAMAEE+ VDL E+  GF  +K+ ++
Subjt:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
KAG6586228.1 hypothetical protein SDJN03_18961, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1876.39Show/hide
Query:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAHVVEI
        +GLGK+AIGI N V S ANGDEMGEDLVGLV+ M EEVGVDLSEMG GFVA KEAEDS LD+  +LAHV+EI
Subjt:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAHVVEI
PNX77350.1 hypothetical protein L195_g033314, partial [Trifolium pratense]7.2e-0654.39Show/hide
Query:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
        MG+ +   G+ ++++ GA+GDEMGE+LVGLVEAMAEE+GVDL E+  GF  +K+ E+
Subjt:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
RXI06115.1 hypothetical protein DVH24_018157 [Malus domestica]5.9e-0872.92Show/hide
Query:  DEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAH
        DE+GEDL+ L +AMAEEVGVDL+EMGSGFVAM+EAEDS L L    AH
Subjt:  DEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAH
TrEMBL top hitse value%identityAlignment
A0A2K3LFP3 Uncharacterized protein (Fragment)3.5e-0654.39Show/hide
Query:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
        MG+ +   G+ ++++ GA+GDEMGE+LVGLVEAMAEE+GVDL E+  GF  +K+ E+
Subjt:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
A0A2Z6M7Y1 Uncharacterized protein2.3e-0550.88Show/hide
Query:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
        +G+ ++  G+ ++++ GA+GDEMGEDLVGLVEAMAEE+ VDL E+  GF  +K+ ++
Subjt:  MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAED
A0A498KK20 Uncharacterized protein2.8e-0872.92Show/hide
Query:  DEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAH
        DE+GEDL+ L +AMAEEVGVDL+EMGSGFVAM+EAEDS L L    AH
Subjt:  DEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGGGAAAAGAGGCGATTGGCATAGTCAATGTGGTTGAAAGCGGCGCAAATGGAGATGAAATGGGAGAGGATTTGGTTGGATTGGTGGAGGCCATGGCG
GAGGAAGTGGGCGTGGATTTGAGTGAGATGGGTTCGGGATTTGTGGCCATGAAGGAGGCGGAGGATTCTTCTCTCGATCTGGAGACACTTCTTGCTCATGTTGTA
GAGATTGCTAATGGGATTTGGATTTGGAGAGAAGCAGAAGAAGAAGTGAATTACGAAGTACGAAGATTGGCGGGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGGGAAAAGAGGCGATTGGCATAGTCAATGTGGTTGAAAGCGGCGCAAATGGAGATGAAATGGGAGAGGATTTGGTTGGATTGGTGGAGGCCATGGCG
GAGGAAGTGGGCGTGGATTTGAGTGAGATGGGTTCGGGATTTGTGGCCATGAAGGAGGCGGAGGATTCTTCTCTCGATCTGGAGACACTTCTTGCTCATGTTGTA
GAGATTGCTAATGGGATTTGGATTTGGAGAGAAGCAGAAGAAGAAGTGAATTACGAAGTACGAAGATTGGCGGGGAGTTGA
Protein sequenceShow/hide protein sequence
MGLGKEAIGIVNVVESGANGDEMGEDLVGLVEAMAEEVGVDLSEMGSGFVAMKEAEDSSLDLETLLAHVVEIANGIWIWREAEEEVNYEVRRLAGS