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CcUC02G032830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G032830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLipoxygenase
Genome locationCicolChr02:28451425..28453841
RNA-Seq ExpressionCcUC02G032830
SyntenyCcUC02G032830
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR001246 - Lipoxygenase, plant
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599220.1 putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sororia]6.2e-0383.33Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS V A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

XP_022946174.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]6.2e-0383.33Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS V A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

XP_022946174.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]4.6e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP+PLRKY EEEL+NLRG+GKGERQEWDRIYDYDVYNDIAD D GD LVRPILGG+DYPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

XP_022999017.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]6.2e-0383.33Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS V A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

XP_022999017.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]4.6e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP+PLRKY EEEL+NLRG+GKGERQEWDRIYDYDVYNDIAD D GD LVRPILGG+DYPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

XP_023545238.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]6.2e-0383.33Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS V A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

XP_023545238.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]4.6e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP+PLRKY EEEL+NLRG+GKGERQEWDRIYDYDVYNDIAD D GD LVRPILGG+DYPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

XP_038890817.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]3.5e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLP+ETPEPLRKY EEELLNLRGDGKGERQEWDRIYDYDVYNDI+D DAGD L+RPILGG  YPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

XP_038890817.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]8.1e-0380Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS + A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

XP_038890817.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]4.6e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP+PLRKY EEEL+NLRG+GKGERQEWDRIYDYDVYNDIAD D GD LVRPILGG+DYPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

TrEMBL top hitse value%identityAlignment
A0A1S3BZD3 Lipoxygenase3.3e-0276.67Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        MIGKILGDALKTTGD LRTT D+A S + A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

A0A5A7U1A9 Lipoxygenase3.3e-0276.67Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        MIGKILGDALKTTGD LRTT D+A S + A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

A0A5A7U1A9 Lipoxygenase7.1e-2986.11Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        ++LPSETPEPLRKY EEELLNLRGDG+GER+EWDRIYDYDVYNDIAD DA D LVRPILGG +YPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

A0A5D3CRZ8 Lipoxygenase3.3e-0276.67Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        MIGKILGDALKTTGD LRTT D+A S + A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

A0A5D3CRZ8 Lipoxygenase7.1e-2986.11Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        ++LPSETPEPLRKY EEELLNLRGDG+GER+EWDRIYDYDVYNDIAD DA D LVRPILGG +YPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

A0A6J1G320 Lipoxygenase3.0e-0383.33Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS V A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

A0A6J1G320 Lipoxygenase1.4e-2987.5Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        ++LPSETPEPLRKY EEELLNLRGDG+GER+EWDRIYDYDVYNDIAD DAGD LVRPILGG +YPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

A0A6J1K9N0 Lipoxygenase2.2e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP+PLRKY EEEL+NLRG+GKGERQEWDRIYDYDVYNDIAD D GD LVRPILGG+DYPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

A0A6J1K9N0 Lipoxygenase3.0e-0383.33Show/hide
Query:  MIGKILGDALKTTGDALRTTRDVAGSTVQA
        M GKI+GDALKTTGDALRTT DVAGS V A
Subjt:  MIGKILGDALKTTGDALRTTRDVAGSTVQA

A0A6J1K9N0 Lipoxygenase2.2e-3088.89Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP+PLRKY EEEL+NLRG+GKGERQEWDRIYDYDVYNDIAD D GD LVRPILGG+DYPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

SwissProt top hitse value%identityAlignment
P09186 Seed linoleate 9S-lipoxygenase-31.2e-2572.6Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTD-YPYPRRGRT
        TYLPSETP PL KY EEEL NLRGDG GER+EW+R+YDYDVYND+ D D G++  RP+LGG D +PYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTD-YPYPRRGRT

P09918 Seed linoleate 9S-lipoxygenase-37.9e-2571.23Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTD-YPYPRRGRT
        TYLPSETP PL  Y EEEL NLRGDG GER+EW+RIYDYDVYND+ + D+G++  RP+LGG++ YPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTD-YPYPRRGRT

P27481 Linoleate 9S-lipoxygenase (Fragment)9.3e-2672.22Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP PL KY EEEL N+RGDG GER+EWDR+YDYDVYND+ + D G  L RP+LGG+  PYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

P38417 Linoleate 9S-lipoxygenase-42.1e-2572.22Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        TYLPSETP PL KY EEEL N+RGDG GER+EWDRIYDYDVYND+ + D+GD   RP+LGG+  PYPRR RT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)1.1e-2372.22Show/hide
Query:  YLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGT-DYPYPRRGRT
        YLPSETPE LRKY E ELL LRGDG G+R+ WDRIYDYDVYND+ + D G+  VR  LGG+ DYPYPRRGRT
Subjt:  YLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGT-DYPYPRRGRT

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 31.5e-1860.56Show/hide
Query:  YLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        YLP+ETP  LR   E+EL NLRGDG G R+  DRIYD+DVYND+ + D   +L RP LGG + PYPRR RT
Subjt:  YLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

AT1G55020.1 lipoxygenase 13.0e-1963.01Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGT-DYPYPRRGRT
        TYLP ETP  L KY EEEL++LRG G+GE +EWDR+YDY  YN   DL       RP+LGGT +YPYPRRGRT
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGT-DYPYPRRGRT

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein4.1e-2166.2Show/hide
Query:  YLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        YLPSETP  LR   E+EL NLRG+GKGER+  DRIYDYDVYNDI + D   +L RP LGG ++PYPRR RT
Subjt:  YLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein1.7e-1961.64Show/hide
Query:  YLPSETPEPLRKYTEEELLNLRGDGK-GERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGT-DYPYPRRGRT
        YLPSETPE +++  EEEL NLRG+ K GE +EWDR+YDY  YND+   D G D VRP+LGG+ + PYPRRG+T
Subjt:  YLPSETPEPLRKYTEEELLNLRGDGK-GERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGT-DYPYPRRGRT

AT3G45140.1 lipoxygenase 21.1e-1854.67Show/hide
Query:  TYLPSETPEPLRKYTEEELLNLRGDGK---GERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT
        +YLPS+TPEPL+KY +EEL  L+G  +   GE  +++RIYDYDVYND+ D D   +L RP++GG  +PYPRR +T
Subjt:  TYLPSETPEPLRKYTEEELLNLRGDGK---GERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGGAAGATTCTAGGAGATGCCCTTAAAACCACTGGCGACGCCCTTAGAACGACCAGGGACGTTGCTGGGTCGACCGTGCAAGCGATATTGACATATCTC
CCGAGTGAGACACCAGAGCCACTTCGAAAGTATACAGAGGAAGAGCTATTGAATCTAAGAGGAGATGGGAAAGGAGAGCGTCAAGAATGGGATAGAATTTATGAT
TATGATGTCTACAATGACATTGCTGATCTTGATGCTGGTGATGATCTTGTTCGCCCTATTCTTGGAGGGACAGACTATCCTTATCCTCGTAGAGGAAGAACTGAA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGGAAGATTCTAGGAGATGCCCTTAAAACCACTGGCGACGCCCTTAGAACGACCAGGGACGTTGCTGGGTCGACCGTGCAAGCGATATTGACATATCTC
CCGAGTGAGACACCAGAGCCACTTCGAAAGTATACAGAGGAAGAGCTATTGAATCTAAGAGGAGATGGGAAAGGAGAGCGTCAAGAATGGGATAGAATTTATGAT
TATGATGTCTACAATGACATTGCTGATCTTGATGCTGGTGATGATCTTGTTCGCCCTATTCTTGGAGGGACAGACTATCCTTATCCTCGTAGAGGAAGAACTGAA
TGA
Protein sequenceShow/hide protein sequence
MIGKILGDALKTTGDALRTTRDVAGSTVQAILTYLPSETPEPLRKYTEEELLNLRGDGKGERQEWDRIYDYDVYNDIADLDAGDDLVRPILGGTDYPYPRRGRTE