; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G032910 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G032910
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLipoxygenase
Genome locationCicolChr02:28606827..28613805
RNA-Seq ExpressionCcUC02G032910
SyntenyCcUC02G032910
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0019752 - carboxylic acid metabolic process (biological process)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR001024 - PLAT/LH2 domain
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454500.1 PREDICTED: probable linoleate 9S-lipoxygenase 5 [Cucumis melo]6.4e-2144.78Show/hide
Query:  EGEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR
        +G+ +KG+V L R N ++  +++              +  QLISS   D++  +QGK+GK+ +L N        + GE VF +SFDWDE+IG PGA  +R
Subjt:  EGEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR

Query:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        N +H++KFFLKS+TL DVP  G IHFDCNSWI+P
Subjt:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

XP_022150790.1 probable linoleate 9S-lipoxygenase 5 [Momordica charantia]6.4e-2145.19Show/hide
Query:  GEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEEIGNPGAISVR
        G+ +KG V L R N ++    +              + L+L+S+   D   G QGK+GK   L+N  AN       GE  F+V+FDWDEEIG PGA  +R
Subjt:  GEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEEIGNPGAISVR

Query:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPH
        ND H+S+FFLKS+TL DVP  G +HFDCNSWI+P+
Subjt:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPH

XP_022150826.1 linoleate 9S-lipoxygenase 6-like [Momordica charantia]2.2e-2150.43Show/hide
Query:  VKGKVTLSRGNWINRRKLEIILQLISS---DKAMGMQGKLGKEIHLQNGEANNEGER-VFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTG
        ++GKV +S  +    R+ +++LQLISS   D +   +GK+G E +L + ++  EGE  VF VSFDWDEEIG PGA  V N+H  + FFL S TL  VP  
Subjt:  VKGKVTLSRGNWINRRKLEIILQLISS---DKAMGMQGKLGKEIHLQNGEANNEGER-VFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTG

Query:  GNIHFDCNSWIHPHRYT
        GNIHFDCNSWI+P+  T
Subjt:  GNIHFDCNSWIHPHRYT

XP_023519177.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]9.3e-2041.33Show/hide
Query:  MGQEREIIVEGEMVKGKVTLSRGNWINRRKL---------EII-----LQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEE
        +G   E+   G+ + G V L R N ++             EI+     L+L+S+   D +   QGK+G+E +L+N  AN       GE  FSV+FDWDEE
Subjt:  MGQEREIIVEGEMVKGKVTLSRGNWINRRKL---------EII-----LQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEE

Query:  IGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT
        +G PGA  +RN+ H+S+FFLKS+TL DVP  G +HFDCNSW++P +  +T
Subjt:  IGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT

XP_038890793.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]1.7e-2146.27Show/hide
Query:  EGEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR
        E + +KGKV L R N ++  +++              +  QLISS   D++  +QGK+GK+ +L N  A     + GE VF +SFDWDE+IG PGA  +R
Subjt:  EGEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR

Query:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        N +H++KFFLKS+TL DVP  G IHFDCNSWI+P
Subjt:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

TrEMBL top hitse value%identityAlignment
A0A1S3BYA5 Lipoxygenase3.1e-2144.78Show/hide
Query:  EGEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR
        +G+ +KG+V L R N ++  +++              +  QLISS   D++  +QGK+GK+ +L N        + GE VF +SFDWDE+IG PGA  +R
Subjt:  EGEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR

Query:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        N +H++KFFLKS+TL DVP  G IHFDCNSWI+P
Subjt:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

A0A5E4G0C4 Lipoxygenase1.0e-1943.28Show/hide
Query:  EGEMVKGKVTLSRGNWINRRKL--------------EIILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR
        EG+ +KG+V L + N ++   L               + LQLISS   D   G  GK+GK  +L+N          G+  F ++FDWDEEIG PGA  +R
Subjt:  EGEMVKGKVTLSRGNWINRRKL--------------EIILQLISS---DKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVR

Query:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        NDHH S+F+LK++TL DVP  G IHF CNSW++P
Subjt:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

A0A6J1D9G9 Lipoxygenase3.1e-2145.19Show/hide
Query:  GEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEEIGNPGAISVR
        G+ +KG V L R N ++    +              + L+L+S+   D   G QGK+GK   L+N  AN       GE  F+V+FDWDEEIG PGA  +R
Subjt:  GEMVKGKVTLSRGNWINRRKLE--------------IILQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEEIGNPGAISVR

Query:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPH
        ND H+S+FFLKS+TL DVP  G +HFDCNSWI+P+
Subjt:  NDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPH

A0A6J1DCP2 Lipoxygenase1.1e-2150.43Show/hide
Query:  VKGKVTLSRGNWINRRKLEIILQLISS---DKAMGMQGKLGKEIHLQNGEANNEGER-VFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTG
        ++GKV +S  +    R+ +++LQLISS   D +   +GK+G E +L + ++  EGE  VF VSFDWDEEIG PGA  V N+H  + FFL S TL  VP  
Subjt:  VKGKVTLSRGNWINRRKLEIILQLISS---DKAMGMQGKLGKEIHLQNGEANNEGER-VFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTG

Query:  GNIHFDCNSWIHPHRYT
        GNIHFDCNSWI+P+  T
Subjt:  GNIHFDCNSWIHPHRYT

A0A6J1HLL8 Lipoxygenase4.5e-2041.33Show/hide
Query:  MGQEREIIVEGEMVKGKVTLSRGNWINRRKL---------EII-----LQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEE
        +G   E+   G+ + G V L R N ++             EI+     L+L+S+   D +   QGK+G+E +L+N  AN       GE  FSV+FDWDEE
Subjt:  MGQEREIIVEGEMVKGKVTLSRGNWINRRKL---------EII-----LQLISS---DKAMGMQGKLGKEIHLQNGEANN-----EGERVFSVSFDWDEE

Query:  IGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT
        +G PGA  +RN+ H+S+FFLKS+TL DVP  G +HFDCNSW++P +  +T
Subjt:  IGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT

SwissProt top hitse value%identityAlignment
P38415 Linoleate 9S-lipoxygenase A1.3e-1645.16Show/hide
Query:  ILQLISSDKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        ++  + SD A G+QGK     +L+N          GE  F V+FDW+EE G PGA  ++N  H ++FFLKS+TL DVP  G +HF CNSW++P
Subjt:  ILQLISSDKAMGMQGKLGKEIHLQNGEAN----NEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

Q06327 Linoleate 9S-lipoxygenase 14.5e-1735.71Show/hide
Query:  GQEREIIVEG------EMVKGKVTLSRGNWINRRKL--------------EIILQLISS---DKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFD
        G+ R+++  G      + VKG V L + N ++                  +I L+L+SS   D   G +GKLGK  HL++      +   GE  F V+FD
Subjt:  GQEREIIVEG------EMVKGKVTLSRGNWINRRKL--------------EIILQLISS---DKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFD

Query:  WDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT
        ++ + G PGA  +RN  H+S+F LKS+TL DVP  G +H+ CNSWI+P ++  T
Subjt:  WDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)1.3e-1645.16Show/hide
Query:  ILQLISSDKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        ++  + SD A G+QGK     +L+N          GE  F V+FDW+EE G PGA  ++N  H ++FFLKS+TL DVP  G +HF CNSW++P
Subjt:  ILQLISSDKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

Q43190 Probable linoleate 9S-lipoxygenase 41.3e-1645.16Show/hide
Query:  ILQLISSDKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        ++  + SD A G+QGK     +L+N          GE  F V+FDW+EE G PGA  ++N  H ++FFLKS+TL DVP  G +HF CNSW++P
Subjt:  ILQLISSDKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

Q43191 Probable linoleate 9S-lipoxygenase 59.0e-1838.35Show/hide
Query:  GEMVKGKVTLSRGNWINRRKL--------------EIILQLIS---SDKAMGMQGKLGKEIHLQ----NGEANNEGERVFSVSFDWDEEIGNPGAISVRN
        G+ VKG + L + N ++   +               + LQLIS   +D    +QGK     +L+     G +   GE  F V+FDWDE+IG PGA  + N
Subjt:  GEMVKGKVTLSRGNWINRRKL--------------EIILQLIS---SDKAMGMQGKLGKEIHLQ----NGEANNEGERVFSVSFDWDEEIGNPGAISVRN

Query:  DHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP
        + H+++F+LKS+TL DVP  GN+HF CNSW++P
Subjt:  DHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHP

Arabidopsis top hitse value%identityAlignment
AT1G55020.1 lipoxygenase 13.2e-1835.71Show/hide
Query:  GQEREIIVEG------EMVKGKVTLSRGNWINRRKL--------------EIILQLISS---DKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFD
        G+ R+++  G      + VKG V L + N ++                  +I L+L+SS   D   G +GKLGK  HL++      +   GE  F V+FD
Subjt:  GQEREIIVEG------EMVKGKVTLSRGNWINRRKL--------------EIILQLISS---DKAMGMQGKLGKEIHLQNG----EANNEGERVFSVSFD

Query:  WDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT
        ++ + G PGA  +RN  H+S+F LKS+TL DVP  G +H+ CNSWI+P ++  T
Subjt:  WDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGNIHFDCNSWIHPHRYTRT

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein6.6e-1645.28Show/hide
Query:  IILQLISS---DKAMGMQGKLGKEIHLQNGEAN-----NEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGN----IHFDCNSWI
        + L LISS   D A   +G+LGK  HL+             E  F V+FDWDE +G P A  ++N HH S+F+LKS+TL   P G      IHF CNSWI
Subjt:  IILQLISS---DKAMGMQGKLGKEIHLQNGEAN-----NEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFDVPTGGN----IHFDCNSWI

Query:  HP-HRY
        +P HRY
Subjt:  HP-HRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGGAGAGAGAGATTATCGTTGAAGGAGAGATGGTTAAAGGGAAAGTTACTTTGTCCAGAGGCAATTGGATCAATAGGCGAAAACTGGAAATTATCCTA
CAACTCATCAGCTCTGACAAGGCAATGGGAATGCAAGGGAAACTTGGAAAGGAAATACACTTGCAAAATGGAGAGGCAAATAATGAAGGGGAAAGAGTGTTTAGT
GTGAGTTTTGATTGGGATGAGGAGATTGGGAATCCAGGAGCTATCTCGGTAAGAAACGACCATCATTGGTCAAAATTCTTCCTCAAATCTATTACTCTTTTTGAT
GTACCTACTGGCGGAAACATCCACTTTGATTGCAACTCTTGGATTCACCCTCATAGATATACACGTACAGGCATATCTTCCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACAGGAGAGAGAGATTATCGTTGAAGGAGAGATGGTTAAAGGGAAAGTTACTTTGTCCAGAGGCAATTGGATCAATAGGCGAAAACTGGAAATTATCCTA
CAACTCATCAGCTCTGACAAGGCAATGGGAATGCAAGGGAAACTTGGAAAGGAAATACACTTGCAAAATGGAGAGGCAAATAATGAAGGGGAAAGAGTGTTTAGT
GTGAGTTTTGATTGGGATGAGGAGATTGGGAATCCAGGAGCTATCTCGGTAAGAAACGACCATCATTGGTCAAAATTCTTCCTCAAATCTATTACTCTTTTTGAT
GTACCTACTGGCGGAAACATCCACTTTGATTGCAACTCTTGGATTCACCCTCATAGATATACACGTACAGGCATATCTTCCTCATGACACACCAAAGCCACTTCA
AAAGTATAGAGAGAAAGAACTCGAGAAAAAGAGAGGAGATGGTAGAAGAATGCCTGAAAAGTGGGAAAACATATACGACTATGATGTCTACAATGATATTAGTGA
TTTAGATTCTAATTCAACAAATAAACCCCCTATTCTTGGAGGATTGGTGGTGCCTTATCCACGTAGAGGAAGAACTGGACGACCACGTTCAAAAAAAGGCAAGTA
CAATTT
Protein sequenceShow/hide protein sequence
MGQEREIIVEGEMVKGKVTLSRGNWINRRKLEIILQLISSDKAMGMQGKLGKEIHLQNGEANNEGERVFSVSFDWDEEIGNPGAISVRNDHHWSKFFLKSITLFD
VPTGGNIHFDCNSWIHPHRYTRTGISSS