; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G032960 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G032960
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionF-box domain LysM domain containing protein
Genome locationCicolChr02:28680712..28687481
RNA-Seq ExpressionCcUC02G032960
SyntenyCcUC02G032960
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139174.1 F-box protein At1g55000 [Cucumis sativus]2.6e-13891.45Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP + S PPQPPPA  S A+LSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK+T  +G SSVQVNKRVLH+LSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022150720.1 F-box protein At1g55000 [Momordica charantia]6.9e-13188.48Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+  V S    PP A SSTAVLSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        VIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIPT
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK+TC +G SSVQVNK+VLH+LSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]3.8e-12988.56Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV
        MGCCC++DDDVEILRHL+PSPTVQS PPQ  P +  SSTAVLSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKV
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV

Query:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI
        KDVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YLDGI
Subjt:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI

Query:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        PTTHHLYGK T  +G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022965884.1 F-box protein At1g55000 [Cucurbita maxima]6.4e-12988.19Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV
        MGCCC++DDDVEILRHL+PSPTVQS PPQ  P +  SSTAVLSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKV
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV

Query:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI
        KDVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNP ILINSICYIEMDAIAKREV  +YLDGI
Subjt:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI

Query:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        PTTHHLYGK T  +G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]5.8e-13891.45Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP VQSLPP+PPP  SS  VLSPMNSHF ALSCRDILRLIFENLSIPDLARSSCV RLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK TC +G SSVQVNKRVLH LSRSMMVDDETAQYYLSISNG+PRAALTEFAEDIRWERH+SIA
Subjt:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein1.3e-13891.45Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP + S PPQPPPA  S A+LSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK+T  +G SSVQVNKRVLH+LSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A5A7TYE5 Lipoxygenase1.2e-10789.91Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP V S P QPPPA  STA+LSPMNSHFFALSCRDILRLIFE+LSIPDLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTC-KGTSSVQ
        T HLYGK+T  +G SSVQ
Subjt:  THHLYGKMTC-KGTSSVQ

A0A6J1D9A3 F-box protein At1g550003.3e-13188.48Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+  V S    PP A SSTAVLSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        VIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIPT
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK+TC +G SSVQVNK+VLH+LSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTC-KGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1FH66 F-box protein At1g550001.8e-12988.56Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV
        MGCCC++DDDVEILRHL+PSPTVQS PPQ  P +  SSTAVLSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKV
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV

Query:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI
        KDVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YLDGI
Subjt:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI

Query:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        PTTHHLYGK T  +G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1HS58 F-box protein At1g550003.1e-12988.19Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV
        MGCCC++DDDVEILRHL+PSPTVQS PPQ  P +  SSTAVLSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKV
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAV--SSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKV

Query:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI
        KDVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNP ILINSICYIEMDAIAKREV  +YLDGI
Subjt:  KDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGI

Query:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        PTTHHLYGK T  +G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  PTTHHLYGKMT-CKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

SwissProt top hitse value%identityAlignment
Q5HZA4 LysM and putative peptidoglycan-binding domain-containing protein 18.8e-0435.21Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICYIEMDAIAKREV
        + H++  GD+LA LA+KY V +  IKR N + ++  I+ ++ L IPI   P+ L N +   E +   + EV
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICYIEMDAIAKREV

Q6DEF4 LysM and putative peptidoglycan-binding domain-containing protein 23.0e-0439.29Show/hide
Query:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK
        LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+ + K
Subjt:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK

Q9FZ32 F-box protein At1g550004.0e-7357.99Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P           +   S    +R++ +L RSM VDD TA YYL+I+ G+P
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP

Query:  RAALTEFAEDIRWERHMSI
        R+AL+EF+ D+RWER   +
Subjt:  RAALTEFAEDIRWERHMSI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein2.8e-7457.99Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P           +   S    +R++ +L RSM VDD TA YYL+I+ G+P
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP

Query:  RAALTEFAEDIRWERHMSI
        R+AL+EF+ D+RWER   +
Subjt:  RAALTEFAEDIRWERHMSI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein2.8e-7457.99Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P           +   S    +R++ +L RSM VDD TA YYL+I+ G+P
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP

Query:  RAALTEFAEDIRWERHMSI
        R+AL+EF+ D+RWER   +
Subjt:  RAALTEFAEDIRWERHMSI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein2.8e-7457.99Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P           +   S    +R++ +L RSM VDD TA YYL+I+ G+P
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNP

Query:  RAALTEFAEDIRWERHMSI
        R+AL+EF+ D+RWER   +
Subjt:  RAALTEFAEDIRWERHMSI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein5.1e-0740.32Show/hide
Query:  SSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        SS  F   NS  +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  SSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein1.6e-0542.55Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCCGCAACCTCCACCGGCGGTTTCCTCCAC
TGCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTACGTCTCATCTTTGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCG
TTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCTTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTC
TGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACG
TCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGACG
CTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAGGGTACGTCTTCTGTTCAAGTGAACAAG
CGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGCCGA
GGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG
mRNA sequenceShow/hide mRNA sequence
AGTTTTAAAAGTCAGGGGAATTTCCATTTTGGGCTTAGAAAAAGGGTTATCCGTACAATTAACAACCCAAATATTTCCCATCCTATCCTTAATTCTAGAGATTGCAATTT
TTGCTCAAATAAAATCCAACAAATAACAACCATTCATTTCTTTCTCTCTCTAAAATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCC
CTCGCCGACCGTTCAGTCTCTGCCGCCGCAACCTCCACCGGCGGTTTCCTCCACTGCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCC
TACGTCTCATCTTTGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTC
AAAGCGCCTTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGA
TAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCC
CCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGACGCTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCAT
CACTTGTATGGTAAGATGACATGCAAGGGTACGTCTTCTGTTCAAGTGAACAAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATA
TTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAGTTTCATAATGGCAGATTGT
TGCTTTGGAGTAAAGATAGTATATAAATTATACAGGTGCTTTCTACTGGAATGTGTTGATCTTCCTCTCCATATCCACAAAGAATGTTCAGATTAAGAATCCATATCCAA
CATCAGTTCACTCCTTGGCTGATTGATACACTGGCATTGCCAAAATTCAATTCGACCACATCAAAACTCTGCTATCACCTTCTTTGGTCAGATCTTCCAACATTTTCACA
ATTACAGTTCACTGCGCCCTTTACCTCGTAAACTCGGTAAAGCGGCTTGCTGGTTTTACTTCCAAAAGTCGTGCCCAATCGTCCATAGTTGCGAAATACTCGATCTCTAG
CCATTCTTCAATGCCAAAATCGAGTGGGGAGCTATGGGAATGTGGAAATTGGGCACTCTTCAACCACTTGAAGCCTATATAAGGGAAGGAAGCCTCCTCTTCAAGGTCAT
CACTAAAATTCAGACCTTCCAAGGAGAATTCTCACCCAAATATCCATAAGACTCTTCAAGAATGAAAGTTCTTCTAAAGAACTTAGAGCTAGGACCTCCCTACCCCATGA
GAATGAGTGTATAGAAAAAGGATTCACCCTTGAGAAAGGAAAATCAACCTAGGGAGCTTGAAAGAGTGAGAAATTTGTCCCAGGTGTTTCCTTTATTTCTAG
Protein sequenceShow/hide protein sequence
MGCCCEQDDDVEILRHLNPSPTVQSLPPQPPPAVSSTAVLSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSF
WRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKGTSSVQVNK
RVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA