; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G033600 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G033600
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSialidase-like isoform X3
Genome locationCicolChr02:29282198..29282824
RNA-Seq ExpressionCcUC02G033600
SyntenyCcUC02G033600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33904.1 hypothetical protein [Cucumis melo subsp. melo]2.7e-5057.67Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFF RPDNKKI ES+PEEK++  HIS+PKS P   D GGR++PT +L  TRYV   EK+ EEV           HTK YEP+KN     DK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT
          + A N  +E NKL+A+AQ+E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEAARRYG  G L  V  AN AT
Subjt:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT

Query:  IDCKEAARRYKGATV
        I+CKEAAR+Y GA V
Subjt:  IDCKEAARRYKGATV

KAA0063635.1 hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa]9.3e-5158.14Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFF RPDNKKI ES+PEEK++  HIS+PKS P   DAGGR++PT +L  TRYV   EK+ EEV           HTK YEP+KN     DK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT
          + A N  +E NKL+A+AQ+E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEAARRYG  G L  V  AN AT
Subjt:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT

Query:  IDCKEAARRYKGATV
        I+CKEAAR+Y GA V
Subjt:  IDCKEAARRYKGATV

KAG6599284.1 putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]7.6e-6161.68Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFFCRPDNK + E   EEKN TSHI DPK  PA  DAGGRR PT VL   RYV TTE Y EE YS+SRD FQ +HTK  EPVK+YGLHHDK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPS-PAFNYHMELNKLIAEAQKETRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDG-------KEAARRYGKLGPLVSVPGANVA
        +PS PA N   E N+L+ + + E  Q +HEMR+S+PMNDIEKA+E+ KEAVNL   KNNAC   DH KKDG        EAARR+G  G    VP AN A
Subjt:  YPS-PAFNYHMELNKLIAEAQKETRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDG-------KEAARRYGKLGPLVSVPGANVA

Query:  TIDCKEAARRYKGA
        TI+CKEAAR+YK +
Subjt:  TIDCKEAARRYKGA

KGN60838.1 hypothetical protein Csa_019431 [Cucumis sativus]2.1e-5058.14Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFF RPDNKKI  +  E K+K  HISDPKS P   DAGGR+QP  +L  TRYV   EKY EEV           HTK YEPVKN     DK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT
            A N  +E NKL+A  QKE R P++EMR LSEPM DI KA+E LKE VNL  SKNNAC  S  +K       D KEAARRYGK G  V V  ANVAT
Subjt:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT

Query:  IDCKEAARRYKGATV
        IDCKEAAR+Y GA V
Subjt:  IDCKEAARRYKGATV

TYG87302.1 hypothetical protein ES288_A13G203600v1 [Gossypium darwinii]2.0e-0545.68Show/hide
Query:  HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV
        HE  LS+P N+I  A+EYLKEAV   +S+ N  P       D +EA R+YG L    S  G+   TID +EAAR+Y G  V
Subjt:  HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV

TrEMBL top hitse value%identityAlignment
A0A0A0LG87 Uncharacterized protein1.0e-5058.14Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFF RPDNKKI  +  E K+K  HISDPKS P   DAGGR+QP  +L  TRYV   EKY EEV           HTK YEPVKN     DK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT
            A N  +E NKL+A  QKE R P++EMR LSEPM DI KA+E LKE VNL  SKNNAC  S  +K       D KEAARRYGK G  V V  ANVAT
Subjt:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT

Query:  IDCKEAARRYKGATV
        IDCKEAAR+Y GA V
Subjt:  IDCKEAARRYKGATV

A0A2P5XVS4 Uncharacterized protein9.9e-0645.68Show/hide
Query:  HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV
        HE  LS+P N+I  A+EYLKEAV   +S+ N  P       D +EA R+YG L    S  G+   TID +EAAR+Y G  V
Subjt:  HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV

A0A5A7VCJ6 Uncharacterized protein4.5e-5158.14Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFF RPDNKKI ES+PEEK++  HIS+PKS P   DAGGR++PT +L  TRYV   EK+ EEV           HTK YEP+KN     DK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT
          + A N  +E NKL+A+AQ+E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEAARRYG  G L  V  AN AT
Subjt:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT

Query:  IDCKEAARRYKGATV
        I+CKEAAR+Y GA V
Subjt:  IDCKEAARRYKGATV

A0A6P4MX67 uncharacterized protein LOC1084631679.9e-0645.68Show/hide
Query:  HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV
        HE  LS+P N+I  A+EYLKEAV   +S+ N  P       D +EA R+YG L    S  G+   TID +EAAR+Y G  V
Subjt:  HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV

E5GBR2 Uncharacterized protein1.3e-5057.67Show/hide
Query:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW
        MADFRYGFF RPDNKKI ES+PEEK++  HIS+PKS P   D GGR++PT +L  TRYV   EK+ EEV           HTK YEP+KN     DK   
Subjt:  MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANW

Query:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT
          + A N  +E NKL+A+AQ+E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEAARRYG  G L  V  AN AT
Subjt:  YPSPAFNYHMELNKLIAEAQKETRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEAARRYGKLGPLVSVPGANVAT

Query:  IDCKEAARRYKGATV
        I+CKEAAR+Y GA V
Subjt:  IDCKEAARRYKGATV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAACAAAACAAGCCATATCTCTGATCCCAAATCAAA
CCCAGCTCGTGCCGATGCCGGAGGAAGGCGACAACCTACCGACGTGCTGGCCGGAACAAGGTATGTTCCGACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAA
GGGATAACTTTCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGCGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATG
GAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAAACAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAA
AGAAGCTGTAAATCTTCATTCTAGCAAAAATAACGCCTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACGGCGGTACGGGAAGCTCGGGCCACTGG
TCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAACAAAACAAGCCATATCTCTGATCCCAAATCAAA
CCCAGCTCGTGCCGATGCCGGAGGAAGGCGACAACCTACCGACGTGCTGGCCGGAACAAGGTATGTTCCGACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAA
GGGATAACTTTCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGCGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATG
GAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAAACAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAA
AGAAGCTGTAAATCTTCATTCTAGCAAAAATAACGCCTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACGGCGGTACGGGAAGCTCGGGCCACTGG
TCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA
Protein sequenceShow/hide protein sequence
MADFRYGFFCRPDNKKISESHPEEKNKTSHISDPKSNPARADAGGRRQPTDVLAGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKANWYPSPAFNYHM
ELNKLIAEAQKETRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAARRYGKLGPLVSVPGANVATIDCKEAARRYKGATV