CuGenDBv2

Gene ID	CcUC02G034400
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	50S ribosomal protein L14, chloroplastic
Genome location	CicolChr02:30225146..30225454
RNA-Seq Expression	CcUC02G034400
Synteny	CcUC02G034400
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015934 - large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000218 - Ribosomal protein L14P IPR036853 - Ribosomal protein L14 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88831.1 ribosomal protein L14, partial [Lagenaria siceraria]

4.9e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

YP_009430663.1 ribosomal protein L14 [Gynostemma cardiospermum]

4.9e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

YP_009751858.1 ribosomal protein L14 [Indofevillea khasiana]

4.9e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

YP_009753040.1 ribosomal protein L14 [Gerrardanthus macrorhizus]

4.9e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

YP_009753656.1 ribosomal protein L14 [Trichosanthes wallichiana]

4.9e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU43 50S ribosomal protein L14, chloroplastic

2.4e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

A0A1X9Q175 50S ribosomal protein L14, chloroplastic

2.4e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

A0A218KG78 50S ribosomal protein L14, chloroplastic

2.4e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

A0A6H0ERW9 50S ribosomal protein L14, chloroplastic

2.4e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

G3ETT4 50S ribosomal protein L14, chloroplastic

2.4e-29

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

SwissProt top hits

e value

%identity

Alignment

B1A971 50S ribosomal protein L14, chloroplastic

4.6e-30

86.08

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQT LNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIK+ VPNT LERSEVIRAVI+R CKELK+ N MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

Q09ME1 50S ribosomal protein L14, chloroplastic

6.0e-30

84.81

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQT LNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIK+ VPNT LERSEVIRAVI+R CKEL+++N MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

Q3V4Z7 50S ribosomal protein L14, chloroplastic

7.1e-31

86.08

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIK+ VPN SLERSEV+RAVI+R CKELK++N MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

Q7YJU2 50S ribosomal protein L14, chloroplastic

1.3e-29

84.81

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQT LNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIK+ VPN  LERSEVIRAVI+R CKELK++N MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

Q8WKP4 50S ribosomal protein L14, chloroplastic

6.5e-32

89.87

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQTLLNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIKK VPNT LERSEVIRAVI+R CKELK+EN MIIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

Arabidopsis top hits

e value

%identity

Alignment

AT5G46160.1 Ribosomal protein L14p/L23e family protein

2.5e-07

34.62

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Query:  IQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        IQ  T+L VVDNSGA+++MCI+ +    ++ A  GD IVA +K+ +PN  +++  V+  V++R   +  + +   +R+
Subjt:  IQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

AT5G46160.2 Ribosomal protein L14p/L23e family protein

2.5e-07

34.62

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Query:  IQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        IQ  T+L VVDNSGA+++MCI+ +    ++ A  GD IVA +K+ +PN  +++  V+  V++R   +  + +   +R+
Subjt:  IQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

ATCG00780.1 ribosomal protein L14

1.2e-30

83.54

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Query:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY
        MIQPQT LNV DNSGARELMCIRIIGASNRRYAH GDVIVAVIK+ +PNT LERSEVIRAVI+R CKELK+ N  IIRY
Subjt:  MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRY

Sequences

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CDS sequence

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ATGATTCAACCTCAAACCCTTTTGAATGTCGTAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATAAT
GGTGACGTCATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACATCTCTAGAAAGATCAGAAGTAATCAGAGCTGTAATTCTACGTATTTGTAAAGAACTCAAA
CAAGAAAACGATATGATAATACGATATGCCTGTTCAGTTAATTCAATAGCTTTTTTCATTGCTTTGCAAAATGAAACTCTAGTCCTTATCCTATATTAG

mRNA sequence

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Protein sequence

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MIQPQTLLNVVDNSGARELMCIRIIGASNRRYAHNGDVIVAVIKKVVPNTSLERSEVIRAVILRICKELKQENDMIIRYACSVNSIAFFIALQNETLVLILY

CcUC02G034400 (gene) of Watermelon (PI 537277) v1 genome